Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
AP3S2P59780 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S2P59780 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S2P59780 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S2P59780 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S2P59780 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
AP3S2P59780 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.04■□□□□ 0.32
AP3S2P59780 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S2P59780 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S2P59780 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
AP3S2P59780 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S2P59780 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S2P59780 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S2P59780 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S2P59780 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S2P59780 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S2P59780 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S2P59780 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S2P59780 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S2P59780 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
AP3S2P59780 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.03■□□□□ 0.32
AP3S2P59780 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S2P59780 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S2P59780 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.03■□□□□ 0.32
AP3S2P59780 DUX4L19-201ENST00000557448 1267 ntBASIC17.03■□□□□ 0.32
AP3S2P59780 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.03■□□□□ 0.32
AP3S2P59780 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S2P59780 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.03■□□□□ 0.32
AP3S2P59780 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.03■□□□□ 0.32
AP3S2P59780 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S2P59780 AC007613.1-201ENST00000572811 2597 ntBASIC17.03■□□□□ 0.32
AP3S2P59780 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S2P59780 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S2P59780 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S2P59780 AL049812.1-201ENST00000432563 2267 ntBASIC17.03■□□□□ 0.32
AP3S2P59780 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
AP3S2P59780 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S2P59780 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S2P59780 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S2P59780 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S2P59780 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S2P59780 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.02■□□□□ 0.32
AP3S2P59780 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S2P59780 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S2P59780 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S2P59780 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S2P59780 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.02■□□□□ 0.32
AP3S2P59780 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S2P59780 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
AP3S2P59780 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
AP3S2P59780 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S2P59780 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
AP3S2P59780 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S2P59780 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S2P59780 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
AP3S2P59780 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S2P59780 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S2P59780 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.02■□□□□ 0.32
AP3S2P59780 EEF1DP3-203ENST00000566025 782 ntBASIC17.02■□□□□ 0.32
AP3S2P59780 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S2P59780 AC011298.3-201ENST00000615796 283 ntBASIC17.02■□□□□ 0.32
AP3S2P59780 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S2P59780 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S2P59780 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.02■□□□□ 0.32
AP3S2P59780 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
AP3S2P59780 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
AP3S2P59780 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
AP3S2P59780 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
AP3S2P59780 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.02■□□□□ 0.31
AP3S2P59780 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
AP3S2P59780 AC116050.2-201ENST00000612102 1779 ntBASIC17.02■□□□□ 0.31
AP3S2P59780 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
AP3S2P59780 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
AP3S2P59780 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
AP3S2P59780 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
AP3S2P59780 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
AP3S2P59780 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
AP3S2P59780 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
AP3S2P59780 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S2P59780 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S2P59780 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
AP3S2P59780 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S2P59780 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S2P59780 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S2P59780 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S2P59780 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S2P59780 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
AP3S2P59780 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S2P59780 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S2P59780 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S2P59780 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S2P59780 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
AP3S2P59780 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
AP3S2P59780 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S2P59780 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S2P59780 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.01■□□□□ 0.31
AP3S2P59780 POU5F1P4-201ENST00000413175 1085 ntBASIC17.01■□□□□ 0.31
AP3S2P59780 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S2P59780 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.01■□□□□ 0.31
AP3S2P59780 AC008175.2-201ENST00000612840 297 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms