Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC016405.3-201ENST00000607710 860 ntBASIC18.46■□□□□ 0.55
CDH12P55289 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDH12P55289 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDH12P55289 AC087633.2-202ENST00000565166 1439 ntBASIC18.46■□□□□ 0.55
CDH12P55289 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH12P55289 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH12P55289 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH12P55289 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH12P55289 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH12P55289 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
CDH12P55289 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.46■□□□□ 0.54
CDH12P55289 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
CDH12P55289 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH12P55289 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH12P55289 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.45■□□□□ 0.54
CDH12P55289 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH12P55289 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH12P55289 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CDH12P55289 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.45■□□□□ 0.54
CDH12P55289 PGM5P4-201ENST00000421970 445 ntBASIC18.45■□□□□ 0.54
CDH12P55289 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH12P55289 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.45■□□□□ 0.54
CDH12P55289 AL162412.1-201ENST00000567129 965 ntBASIC18.45■□□□□ 0.54
CDH12P55289 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
CDH12P55289 MFSD11-216ENST00000590393 1141 ntBASIC18.45■□□□□ 0.54
CDH12P55289 AL356652.1-201ENST00000615962 565 ntBASIC18.45■□□□□ 0.54
CDH12P55289 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.45■□□□□ 0.54
CDH12P55289 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH12P55289 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH12P55289 TNXA-203ENST00000507684 2038 ntBASIC18.45■□□□□ 0.54
CDH12P55289 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.45■□□□□ 0.54
CDH12P55289 CYP21A1P-202ENST00000354927 1481 ntBASIC18.45■□□□□ 0.54
CDH12P55289 AC138932.1-201ENST00000534164 6830 ntBASIC18.45■□□□□ 0.54
CDH12P55289 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH12P55289 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.45■□□□□ 0.54
CDH12P55289 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CDH12P55289 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH12P55289 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH12P55289 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH12P55289 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH12P55289 AC016769.1-201ENST00000409132 1010 ntBASIC18.44■□□□□ 0.54
CDH12P55289 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDH12P55289 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDH12P55289 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.44■□□□□ 0.54
CDH12P55289 RARRES2P6-201ENST00000567333 442 ntBASIC18.44■□□□□ 0.54
CDH12P55289 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.44■□□□□ 0.54
CDH12P55289 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH12P55289 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.44■□□□□ 0.54
CDH12P55289 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH12P55289 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH12P55289 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.44■□□□□ 0.54
CDH12P55289 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH12P55289 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
CDH12P55289 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.44■□□□□ 0.54
CDH12P55289 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH12P55289 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH12P55289 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH12P55289 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH12P55289 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CDH12P55289 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH12P55289 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.43■□□□□ 0.54
CDH12P55289 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
CDH12P55289 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH12P55289 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH12P55289 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH12P55289 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.43■□□□□ 0.54
CDH12P55289 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH12P55289 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH12P55289 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH12P55289 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH12P55289 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH12P55289 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CDH12P55289 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.43■□□□□ 0.54
CDH12P55289 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CDH12P55289 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH12P55289 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH12P55289 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH12P55289 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH12P55289 AC004408.2-201ENST00000623613 2777 ntBASIC18.43■□□□□ 0.54
CDH12P55289 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH12P55289 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH12P55289 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH12P55289 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH12P55289 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CDH12P55289 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH12P55289 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH12P55289 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH12P55289 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.42■□□□□ 0.54
CDH12P55289 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH12P55289 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH12P55289 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CDH12P55289 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CDH12P55289 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH12P55289 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CDH12P55289 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH12P55289 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.42■□□□□ 0.54
CDH12P55289 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH12P55289 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH12P55289 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.42■□□□□ 0.54
CDH12P55289 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms