Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.51■■□□□ 1.19
CLCN1P35523 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
CLCN1P35523 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC22.51■■□□□ 1.19
CLCN1P35523 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
CLCN1P35523 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.51■■□□□ 1.19
CLCN1P35523 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CLCN1P35523 EEF1DP3-203ENST00000566025 782 ntBASIC22.51■■□□□ 1.19
CLCN1P35523 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.51■■□□□ 1.19
CLCN1P35523 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLCN1P35523 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.51■■□□□ 1.19
CLCN1P35523 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLCN1P35523 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC22.51■■□□□ 1.19
CLCN1P35523 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.51■■□□□ 1.19
CLCN1P35523 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLCN1P35523 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CLCN1P35523 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
CLCN1P35523 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLCN1P35523 AC106820.2-201ENST00000563775 3264 ntBASIC22.5■■□□□ 1.19
CLCN1P35523 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLCN1P35523 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
CLCN1P35523 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.5■■□□□ 1.19
CLCN1P35523 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.5■■□□□ 1.19
CLCN1P35523 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC22.5■■□□□ 1.19
CLCN1P35523 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
CLCN1P35523 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLCN1P35523 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLCN1P35523 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CLCN1P35523 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLCN1P35523 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLCN1P35523 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLCN1P35523 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLCN1P35523 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLCN1P35523 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC22.49■■□□□ 1.19
CLCN1P35523 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.49■■□□□ 1.19
CLCN1P35523 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CLCN1P35523 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLCN1P35523 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC22.49■■□□□ 1.19
CLCN1P35523 AC068880.1-201ENST00000507289 2297 ntBASIC22.49■■□□□ 1.19
CLCN1P35523 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC22.49■■□□□ 1.19
CLCN1P35523 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.49■■□□□ 1.19
CLCN1P35523 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
CLCN1P35523 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CLCN1P35523 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLCN1P35523 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.49■■□□□ 1.19
CLCN1P35523 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC22.49■■□□□ 1.19
CLCN1P35523 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLCN1P35523 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLCN1P35523 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.49■■□□□ 1.19
CLCN1P35523 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC22.49■■□□□ 1.19
CLCN1P35523 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CLCN1P35523 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CLCN1P35523 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CLCN1P35523 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC22.48■■□□□ 1.19
CLCN1P35523 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC22.48■■□□□ 1.19
CLCN1P35523 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CLCN1P35523 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC22.48■■□□□ 1.19
CLCN1P35523 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CLCN1P35523 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.48■■□□□ 1.19
CLCN1P35523 AC053503.5-201ENST00000601508 636 ntBASIC22.48■■□□□ 1.19
CLCN1P35523 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
CLCN1P35523 CROCCP3-202ENST00000420820 1947 ntBASIC22.48■■□□□ 1.19
CLCN1P35523 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLCN1P35523 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLCN1P35523 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CLCN1P35523 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC22.48■■□□□ 1.19
CLCN1P35523 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.48■■□□□ 1.19
CLCN1P35523 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLCN1P35523 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLCN1P35523 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLCN1P35523 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.47■■□□□ 1.19
CLCN1P35523 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLCN1P35523 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLCN1P35523 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CLCN1P35523 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.47■■□□□ 1.19
CLCN1P35523 AC012313.1-201ENST00000593393 3059 ntBASIC22.47■■□□□ 1.19
CLCN1P35523 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLCN1P35523 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLCN1P35523 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CLCN1P35523 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLCN1P35523 AC099398.1-201ENST00000567919 2776 ntBASIC22.47■■□□□ 1.19
CLCN1P35523 LINC01465-201ENST00000408887 1940 ntBASIC22.47■■□□□ 1.19
CLCN1P35523 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCN1P35523 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCN1P35523 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCN1P35523 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CLCN1P35523 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCN1P35523 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCN1P35523 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCN1P35523 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCN1P35523 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCN1P35523 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CLCN1P35523 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.46■■□□□ 1.19
CLCN1P35523 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CLCN1P35523 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCN1P35523 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CLCN1P35523 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCN1P35523 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.46■■□□□ 1.19
CLCN1P35523 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
CLCN1P35523 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.45■■□□□ 1.19
CLCN1P35523 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms