Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.82■□□□□ 0.923e-7■■■■□ 24.2
U2AF2P26368 TXNRD1-221ENST00000529784 607 ntTSL 415.47■□□□□ 0.073e-15■■■■□ 24.2
U2AF2P26368 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.49□□□□□ -1.213e-6■■■■□ 24.2
U2AF2P26368 DKC1-207ENST00000473552 656 ntTSL 211.25□□□□□ -0.616e-10■■■■□ 24.2
U2AF2P26368 PHF14-206ENST00000476009 1044 ntTSL 321.55■■□□□ 1.042e-6■■■■□ 24.2
U2AF2P26368 ASNS-217ENST00000495255 1678 ntTSL 213.56□□□□□ -0.244e-17■■■■□ 24.2
U2AF2P26368 ABI2-205ENST00000376135 568 ntTSL 315.07■□□□□ 07e-7■■■■□ 24.2
U2AF2P26368 MARS-216ENST00000549048 755 ntTSL 317.2■□□□□ 0.345e-11■■■■□ 24.2
U2AF2P26368 CCDC14-214ENST00000478956 555 ntTSL 415.21■□□□□ 0.033e-7■■■■□ 24.2
U2AF2P26368 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.15■□□□□ 0.826e-7■■■■□ 24.2
U2AF2P26368 LCORL-205ENST00000510451 1013 ntTSL 215.08■□□□□ 06e-7■■■■□ 24.2
U2AF2P26368 LCORL-207ENST00000635767 10430 ntTSL 5 BASIC11.55□□□□□ -0.566e-7■■■■□ 24.2
U2AF2P26368 LCORL-208ENST00000637787 9431 ntTSL 55.1□□□□□ -1.596e-7■■■■□ 24.2
U2AF2P26368 LCORL-204ENST00000510121 486 ntTSL 31□□□□□ -2.256e-7■■■■□ 24.2
U2AF2P26368 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.044e-7■■■■□ 24.2
U2AF2P26368 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC27.45■■□□□ 1.984e-7■■■■□ 24.2
U2AF2P26368 KAT8-205ENST00000539683 1051 ntTSL 219.53■□□□□ 0.724e-7■■■■□ 24.2
U2AF2P26368 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.34e-7■■■■□ 24.2
U2AF2P26368 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.323e-6■■■■□ 24.2
U2AF2P26368 STK3-202ENST00000424861 2065 ntTSL 216.38■□□□□ 0.213e-6■■■■□ 24.2
U2AF2P26368 STK3-218ENST00000617590 2485 ntTSL 5 BASIC16.37■□□□□ 0.213e-6■■■■□ 24.2
U2AF2P26368 STK3-211ENST00000521649 574 ntTSL 412.32□□□□□ -0.443e-6■■■■□ 24.2
U2AF2P26368 STK3-205ENST00000518582 725 ntTSL 39.19□□□□□ -0.943e-6■■■■□ 24.2
U2AF2P26368 STK3-204ENST00000518165 817 ntTSL 1 (best)8.08□□□□□ -1.123e-6■■■■□ 24.2
U2AF2P26368 STK3-216ENST00000523601 3107 ntTSL 2 BASIC7.32□□□□□ -1.243e-6■■■■□ 24.2
U2AF2P26368 SLTM-206ENST00000480144 2277 ntTSL 216.02■□□□□ 0.167e-8■■■■□ 24.2
U2AF2P26368 SLTM-226ENST00000628684 1040 ntTSL 5 BASIC11.23□□□□□ -0.617e-8■■■■□ 24.2
U2AF2P26368 SRSF11-207ENST00000463116 735 ntTSL 31.39□□□□□ -2.198e-23■■■■□ 24.2
U2AF2P26368 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.68■□□□□ 0.263e-9■■■■□ 24.2
U2AF2P26368 NDST2-207ENST00000639645 2448 ntTSL 5 BASIC12.71□□□□□ -0.383e-9■■■■□ 24.2
U2AF2P26368 NDST2-201ENST00000299641 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.443e-9■■■■□ 24.2
U2AF2P26368 NDST2-202ENST00000309979 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.453e-9■■■■□ 24.2
U2AF2P26368 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.219e-7■■■■□ 24.1
U2AF2P26368 GLA-207ENST00000493905 1358 ntTSL 512.43□□□□□ -0.426e-8■■■■□ 24.1
U2AF2P26368 GLA-201ENST00000218516 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.596e-8■■■■□ 24.1
U2AF2P26368 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC8.77□□□□□ -1.019e-7■■■■□ 24.1
U2AF2P26368 GLA-203ENST00000468823 619 ntTSL 53.6□□□□□ -1.836e-8■■■■□ 24.1
U2AF2P26368 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.21■■□□□ 1.791e-7■■■■□ 24.1
U2AF2P26368 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.071e-7■■■■□ 24.1
U2AF2P26368 DNM1L-212ENST00000547548 724 ntTSL 21.62□□□□□ -2.154e-9■■■■□ 24.1
U2AF2P26368 PPP2R2A-219ENST00000523473 654 ntTSL 45.83□□□□□ -1.483e-11■■■■□ 24.1
U2AF2P26368 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.533e-11■■■■□ 24.1
U2AF2P26368 PPP2R2A-216ENST00000522150 573 ntTSL 53.02□□□□□ -1.933e-11■■■■□ 24.1
U2AF2P26368 PUM2-209ENST00000440577 4352 ntTSL 1 (best)6.55□□□□□ -1.363e-10■■■■□ 24.1
U2AF2P26368 PCM1-204ENST00000517730 2536 ntTSL 1 (best)18.17■□□□□ 0.56e-8■■■■□ 24.1
U2AF2P26368 SPOP-205ENST00000503676 1932 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.125e-6■■■■□ 24.1
U2AF2P26368 PPARGC1A-209ENST00000509702 2704 ntTSL 57.31□□□□□ -1.243e-7■■■■□ 24.1
U2AF2P26368 ARHGEF10L-201ENST00000167825 3018 ntTSL 215.63■□□□□ 0.093e-8■■■■□ 24.1
U2AF2P26368 ARHGEF10L-206ENST00000469726 4585 ntTSL 214.78□□□□□ -0.043e-8■■■■□ 24.1
U2AF2P26368 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC14.65□□□□□ -0.063e-8■■■■□ 24.1
U2AF2P26368 AC093752.1-203ENST00000504422 563 ntTSL 217.96■□□□□ 0.472e-9■■■■□ 24.1
U2AF2P26368 ELF1-202ENST00000405737 903 ntTSL 219.66■□□□□ 0.741e-9■■■■□ 24.1
U2AF2P26368 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.921e-9■■■■□ 24.1
U2AF2P26368 CCDC18-AS1-217ENST00000449305 748 ntTSL 217.5■□□□□ 0.399e-9■■■■□ 24.1
U2AF2P26368 CCDC18-AS1-223ENST00000457387 806 ntTSL 214□□□□□ -0.179e-9■■■■□ 24.1
U2AF2P26368 CCDC18-AS1-214ENST00000445076 620 ntTSL 29.85□□□□□ -0.839e-9■■■■□ 24.1
U2AF2P26368 CCDC18-AS1-220ENST00000452347 969 ntTSL 28.11□□□□□ -1.119e-9■■■■□ 24.1
U2AF2P26368 CCDC18-AS1-211ENST00000438777 752 ntTSL 36.6□□□□□ -1.359e-9■■■■□ 24.1
U2AF2P26368 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.67■■■□□ 2.342e-7■■■■□ 24
U2AF2P26368 AL359075.1-202ENST00000512906 770 ntTSL 521.63■■□□□ 1.052e-7■■■■□ 24
U2AF2P26368 AL359075.1-203ENST00000462729 1002 ntBASIC20.63■□□□□ 0.892e-7■■■■□ 24
U2AF2P26368 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.08■□□□□ 0.812e-7■■■■□ 24
U2AF2P26368 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC16.53■□□□□ 0.242e-7■■■■□ 24
U2AF2P26368 AL359075.2-203ENST00000464428 5890 ntTSL 213.59□□□□□ -0.232e-7■■■■□ 24
U2AF2P26368 PHF20L1-206ENST00000395376 2236 ntTSL 5 BASIC12.29□□□□□ -0.442e-7■■■■□ 24
U2AF2P26368 PHF20L1-217ENST00000521038 427 ntTSL 56.99□□□□□ -1.292e-7■■■■□ 24
U2AF2P26368 PHF20L1-205ENST00000395374 2761 ntTSL 21.5□□□□□ -2.172e-7■■■■□ 24
U2AF2P26368 SERINC1-201ENST00000339697 3137 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.513e-17■■■■□ 24
U2AF2P26368 ARHGAP12-207ENST00000492028 3227 ntTSL 1 (best)4.17□□□□□ -1.744e-7■■■■□ 24
U2AF2P26368 VPS13D-204ENST00000469054 567 ntTSL 313.56□□□□□ -0.241e-7■■■■□ 24
U2AF2P26368 ZDHHC17-202ENST00000546778 1146 ntTSL 217.78■□□□□ 0.442e-7■■■■□ 24
U2AF2P26368 ZDHHC17-212ENST00000550876 564 ntTSL 48.71□□□□□ -1.022e-7■■■■□ 24
U2AF2P26368 ZDHHC17-214ENST00000552453 856 ntTSL 55.28□□□□□ -1.562e-7■■■■□ 24
U2AF2P26368 SCFD1-214ENST00000554819 608 ntTSL 51.87□□□□□ -2.113e-6■■■■□ 24
U2AF2P26368 CCDC18-AS1-201ENST00000411670 675 ntTSL 58.7□□□□□ -1.021e-6■■■■□ 24
U2AF2P26368 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.66□□□□□ -1.341e-6■■■■□ 24
U2AF2P26368 XYLB-201ENST00000207870 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.53e-7■■■■□ 24
U2AF2P26368 XYLB-202ENST00000424034 3484 ntTSL 211.18□□□□□ -0.623e-7■■■■□ 24
U2AF2P26368 SETD5-216ENST00000466172 248 ntTSL 21.98□□□□□ -2.096e-20■■■■□ 24
U2AF2P26368 ESRRB-206ENST00000512784 1826 ntTSL 518.21■□□□□ 0.513e-8■■■■□ 24
U2AF2P26368 ESRRB-202ENST00000505752 2432 ntTSL 1 (best)15.47■□□□□ 0.073e-8■■■■□ 24
U2AF2P26368 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC15.47■□□□□ 0.073e-8■■■■□ 24
U2AF2P26368 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC15.32■□□□□ 0.043e-8■■■■□ 24
U2AF2P26368 AL390961.1-202ENST00000636744 1172 ntBASIC12.19□□□□□ -0.462e-7■■■■□ 24
U2AF2P26368 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.59□□□□□ -1.992e-7■■■■□ 24
U2AF2P26368 ABCC3-214ENST00000513745 898 ntTSL 517.5■□□□□ 0.391e-7■■■■□ 24
U2AF2P26368 CCDC18-AS1-212ENST00000440778 596 ntTSL 57.01□□□□□ -1.292e-6■■■■□ 24
U2AF2P26368 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.511e-9■■■■□ 24
U2AF2P26368 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.321e-9■■■■□ 24
U2AF2P26368 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.161e-9■■■■□ 24
U2AF2P26368 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.861e-9■■■■□ 24
U2AF2P26368 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.251e-6■■■■□ 24
U2AF2P26368 AC012184.2-201ENST00000565116 565 ntTSL 511.41□□□□□ -0.581e-6■■■■□ 24
U2AF2P26368 AC012184.2-202ENST00000567706 867 ntTSL 59.98□□□□□ -0.811e-6■■■■□ 24
U2AF2P26368 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.5■■□□□ 1.674e-10■■■■□ 24
U2AF2P26368 ARPC4-204ENST00000440787 910 ntTSL 322.07■■□□□ 1.124e-10■■■■□ 24
U2AF2P26368 ARPC4-202ENST00000417500 957 ntTSL 521.62■■□□□ 1.054e-10■■■■□ 24
U2AF2P26368 DMKN-225ENST00000464894 754 ntTSL 521.29■■□□□ 11e-6■■■■□ 24
U2AF2P26368 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.984e-10■■■■□ 24
U2AF2P26368 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.941e-6■■■■□ 24
Retrieved 100 of 36,523 protein–RNA pairs in 326.8 ms