Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H1CP16403 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HIST1H1CP16403 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.79■□□□□ 0.44
HIST1H1CP16403 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.79■□□□□ 0.44
HIST1H1CP16403 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.79■□□□□ 0.44
HIST1H1CP16403 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H1CP16403 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
HIST1H1CP16403 AC231657.2-201ENST00000624556 255 ntBASIC17.79■□□□□ 0.44
HIST1H1CP16403 AC098818.2-201ENST00000564925 2320 ntBASIC17.79■□□□□ 0.44
HIST1H1CP16403 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H1CP16403 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H1CP16403 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.79■□□□□ 0.44
HIST1H1CP16403 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H1CP16403 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.79■□□□□ 0.44
HIST1H1CP16403 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H1CP16403 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.79■□□□□ 0.44
HIST1H1CP16403 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H1CP16403 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.79■□□□□ 0.44
HIST1H1CP16403 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
HIST1H1CP16403 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.79■□□□□ 0.44
HIST1H1CP16403 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
HIST1H1CP16403 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1CP16403 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.78■□□□□ 0.44
HIST1H1CP16403 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1CP16403 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HIST1H1CP16403 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HIST1H1CP16403 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1CP16403 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1CP16403 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1CP16403 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1CP16403 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1CP16403 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1CP16403 AC007322.1-201ENST00000426983 750 ntBASIC17.78■□□□□ 0.44
HIST1H1CP16403 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.78■□□□□ 0.44
HIST1H1CP16403 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1CP16403 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.78■□□□□ 0.44
HIST1H1CP16403 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.78■□□□□ 0.44
HIST1H1CP16403 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.78■□□□□ 0.44
HIST1H1CP16403 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.78■□□□□ 0.44
HIST1H1CP16403 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.78■□□□□ 0.44
HIST1H1CP16403 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1CP16403 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
HIST1H1CP16403 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HIST1H1CP16403 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1CP16403 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1CP16403 AP001271.2-201ENST00000624018 1556 ntBASIC17.78■□□□□ 0.44
HIST1H1CP16403 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1CP16403 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1CP16403 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HIST1H1CP16403 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H1CP16403 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H1CP16403 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H1CP16403 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H1CP16403 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H1CP16403 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H1CP16403 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H1CP16403 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H1CP16403 BX323043.1-201ENST00000641006 1765 ntBASIC17.77■□□□□ 0.44
HIST1H1CP16403 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H1CP16403 HLA-G-202ENST00000376815 851 ntBASIC17.77■□□□□ 0.44
HIST1H1CP16403 HLA-G-203ENST00000376818 1127 ntBASIC17.77■□□□□ 0.44
HIST1H1CP16403 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H1CP16403 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.77■□□□□ 0.44
HIST1H1CP16403 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.77■□□□□ 0.44
HIST1H1CP16403 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.77■□□□□ 0.44
HIST1H1CP16403 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H1CP16403 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
HIST1H1CP16403 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H1CP16403 AC010980.2-201ENST00000587099 1412 ntBASIC17.77■□□□□ 0.44
HIST1H1CP16403 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.77■□□□□ 0.44
HIST1H1CP16403 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.77■□□□□ 0.44
HIST1H1CP16403 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.77■□□□□ 0.43
HIST1H1CP16403 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HIST1H1CP16403 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HIST1H1CP16403 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.77■□□□□ 0.43
HIST1H1CP16403 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
HIST1H1CP16403 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
HIST1H1CP16403 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.76■□□□□ 0.43
HIST1H1CP16403 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HIST1H1CP16403 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.76■□□□□ 0.43
HIST1H1CP16403 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H1CP16403 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H1CP16403 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H1CP16403 RNF165-205ENST00000588679 2904 ntBASIC17.76■□□□□ 0.43
HIST1H1CP16403 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HIST1H1CP16403 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H1CP16403 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.76■□□□□ 0.43
HIST1H1CP16403 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.76■□□□□ 0.43
HIST1H1CP16403 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H1CP16403 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H1CP16403 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H1CP16403 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.76■□□□□ 0.43
HIST1H1CP16403 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H1CP16403 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HIST1H1CP16403 AP000974.1-201ENST00000623909 2387 ntBASIC17.76■□□□□ 0.43
HIST1H1CP16403 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H1CP16403 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H1CP16403 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.76■□□□□ 0.43
HIST1H1CP16403 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HIST1H1CP16403 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms