Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSPG5O95196 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSPG5O95196 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.32■■□□□ 1
CSPG5O95196 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.32■■□□□ 1
CSPG5O95196 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.32■■□□□ 1
CSPG5O95196 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSPG5O95196 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
CSPG5O95196 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.32■■□□□ 1
CSPG5O95196 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.32■■□□□ 1
CSPG5O95196 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CSPG5O95196 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSPG5O95196 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSPG5O95196 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSPG5O95196 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CSPG5O95196 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CSPG5O95196 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CSPG5O95196 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.31■■□□□ 1
CSPG5O95196 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
CSPG5O95196 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CSPG5O95196 KRT8P36-201ENST00000489121 1440 ntBASIC21.31■■□□□ 1
CSPG5O95196 AC027702.1-201ENST00000563810 1770 ntBASIC21.31■■□□□ 1
CSPG5O95196 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSPG5O95196 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
CSPG5O95196 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.31■■□□□ 1
CSPG5O95196 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.31■■□□□ 1
CSPG5O95196 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.31■■□□□ 1
CSPG5O95196 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.31■■□□□ 1
CSPG5O95196 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.31■■□□□ 1
CSPG5O95196 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CSPG5O95196 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
CSPG5O95196 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
CSPG5O95196 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.31■■□□□ 1
CSPG5O95196 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.31■■□□□ 1
CSPG5O95196 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.31■■□□□ 1
CSPG5O95196 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CSPG5O95196 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.31■■□□□ 1
CSPG5O95196 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSPG5O95196 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSPG5O95196 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CSPG5O95196 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.3■■□□□ 1
CSPG5O95196 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSPG5O95196 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.3■■□□□ 1
CSPG5O95196 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.3■■□□□ 1
CSPG5O95196 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.3■■□□□ 1
CSPG5O95196 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSPG5O95196 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.3■■□□□ 1
CSPG5O95196 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.3■■□□□ 1
CSPG5O95196 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.3■■□□□ 1
CSPG5O95196 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.3■■□□□ 1
CSPG5O95196 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSPG5O95196 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.3■■□□□ 1
CSPG5O95196 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.3■■□□□ 1
CSPG5O95196 SLC25A3P1-201ENST00000443844 931 ntBASIC21.3■■□□□ 1
CSPG5O95196 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.3■■□□□ 1
CSPG5O95196 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.3■■□□□ 1
CSPG5O95196 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.3■■□□□ 1
CSPG5O95196 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.3■■□□□ 1
CSPG5O95196 FBXW4P1-201ENST00000426721 2239 ntBASIC21.3■■□□□ 1
CSPG5O95196 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSPG5O95196 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSPG5O95196 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSPG5O95196 KRT18P22-201ENST00000402024 1347 ntBASIC21.29■■□□□ 1
CSPG5O95196 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
CSPG5O95196 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CSPG5O95196 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.29■■□□□ 1
CSPG5O95196 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.29■■□□□ 1
CSPG5O95196 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CSPG5O95196 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.29■■□□□ 1
CSPG5O95196 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CSPG5O95196 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CSPG5O95196 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CSPG5O95196 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CSPG5O95196 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.29■■□□□ 1
CSPG5O95196 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.29■■□□□ 1
CSPG5O95196 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.29■■□□□ 1
CSPG5O95196 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.29■■□□□ 1
CSPG5O95196 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.29■■□□□ 1
CSPG5O95196 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CSPG5O95196 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.29■■□□□ 1
CSPG5O95196 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.28■■□□□ 1
CSPG5O95196 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CSPG5O95196 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CSPG5O95196 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CSPG5O95196 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CSPG5O95196 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.28■■□□□ 1
CSPG5O95196 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.28■■□□□ 1
CSPG5O95196 DUX4L26-201ENST00000489078 1255 ntBASIC21.28■■□□□ 1
CSPG5O95196 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.28■■□□□ 1
CSPG5O95196 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.28■■□□□ 1
CSPG5O95196 AC010203.1-204ENST00000548782 407 ntBASIC21.28■■□□□ 1
CSPG5O95196 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.28■■□□□ 1
CSPG5O95196 MIR2861-201ENST00000636310 90 ntBASIC21.28■■□□□ 1
CSPG5O95196 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CSPG5O95196 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.28■■□□□ 1
CSPG5O95196 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CSPG5O95196 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CSPG5O95196 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSPG5O95196 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.27■■□□□ 1
CSPG5O95196 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSPG5O95196 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms