Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FOXD2O60548 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
FOXD2O60548 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.96■□□□□ 0.79
FOXD2O60548 REXO1L10P-201ENST00000615707 1290 ntBASIC19.96■□□□□ 0.79
FOXD2O60548 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.96■□□□□ 0.79
FOXD2O60548 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.96■□□□□ 0.79
FOXD2O60548 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FOXD2O60548 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXD2O60548 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXD2O60548 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FOXD2O60548 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.96■□□□□ 0.79
FOXD2O60548 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXD2O60548 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FOXD2O60548 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
FOXD2O60548 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXD2O60548 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXD2O60548 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXD2O60548 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FOXD2O60548 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FOXD2O60548 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.95■□□□□ 0.78
FOXD2O60548 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.95■□□□□ 0.78
FOXD2O60548 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
FOXD2O60548 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
FOXD2O60548 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FOXD2O60548 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FOXD2O60548 LIN28AP1-201ENST00000429574 405 ntBASIC19.95■□□□□ 0.78
FOXD2O60548 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.95■□□□□ 0.78
FOXD2O60548 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.95■□□□□ 0.78
FOXD2O60548 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXD2O60548 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXD2O60548 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.95■□□□□ 0.78
FOXD2O60548 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXD2O60548 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
FOXD2O60548 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
FOXD2O60548 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FOXD2O60548 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.95■□□□□ 0.78
FOXD2O60548 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
FOXD2O60548 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.94■□□□□ 0.78
FOXD2O60548 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXD2O60548 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FOXD2O60548 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.94■□□□□ 0.78
FOXD2O60548 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXD2O60548 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXD2O60548 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXD2O60548 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXD2O60548 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXD2O60548 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXD2O60548 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXD2O60548 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.94■□□□□ 0.78
FOXD2O60548 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.94■□□□□ 0.78
FOXD2O60548 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.94■□□□□ 0.78
FOXD2O60548 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.94■□□□□ 0.78
FOXD2O60548 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXD2O60548 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
FOXD2O60548 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.94■□□□□ 0.78
FOXD2O60548 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.94■□□□□ 0.78
FOXD2O60548 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXD2O60548 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXD2O60548 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FOXD2O60548 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.94■□□□□ 0.78
FOXD2O60548 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXD2O60548 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXD2O60548 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXD2O60548 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.93■□□□□ 0.78
FOXD2O60548 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
FOXD2O60548 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXD2O60548 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
FOXD2O60548 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.93■□□□□ 0.78
FOXD2O60548 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXD2O60548 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.93■□□□□ 0.78
FOXD2O60548 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXD2O60548 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXD2O60548 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXD2O60548 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXD2O60548 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.93■□□□□ 0.78
FOXD2O60548 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.93■□□□□ 0.78
FOXD2O60548 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.93■□□□□ 0.78
FOXD2O60548 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.93■□□□□ 0.78
FOXD2O60548 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.93■□□□□ 0.78
FOXD2O60548 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.93■□□□□ 0.78
FOXD2O60548 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
FOXD2O60548 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.93■□□□□ 0.78
FOXD2O60548 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.93■□□□□ 0.78
FOXD2O60548 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXD2O60548 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.93■□□□□ 0.78
FOXD2O60548 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
FOXD2O60548 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXD2O60548 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.92■□□□□ 0.78
FOXD2O60548 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FOXD2O60548 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXD2O60548 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXD2O60548 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXD2O60548 AC010542.4-201ENST00000563151 1910 ntBASIC19.92■□□□□ 0.78
FOXD2O60548 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.92■□□□□ 0.78
FOXD2O60548 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXD2O60548 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.92■□□□□ 0.78
FOXD2O60548 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FOXD2O60548 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
FOXD2O60548 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
FOXD2O60548 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms