Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC28A2O43868 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A2O43868 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC28A2O43868 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A2O43868 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC28A2O43868 AC116050.2-201ENST00000612102 1779 ntBASIC19.09■□□□□ 0.65
SLC28A2O43868 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A2O43868 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A2O43868 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A2O43868 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A2O43868 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC28A2O43868 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SLC28A2O43868 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A2O43868 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A2O43868 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A2O43868 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC28A2O43868 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC28A2O43868 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC28A2O43868 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC28A2O43868 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SLC28A2O43868 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.09■□□□□ 0.65
SLC28A2O43868 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC28A2O43868 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC28A2O43868 RN7SL850P-201ENST00000579959 291 ntBASIC19.09■□□□□ 0.65
SLC28A2O43868 AP001412.1-201ENST00000608405 714 ntBASIC19.09■□□□□ 0.65
SLC28A2O43868 AL590326.2-201ENST00000625139 305 ntBASIC19.09■□□□□ 0.65
SLC28A2O43868 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SLC28A2O43868 AC092368.3-202ENST00000574180 1591 ntBASIC19.09■□□□□ 0.65
SLC28A2O43868 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A2O43868 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A2O43868 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A2O43868 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC28A2O43868 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SLC28A2O43868 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC28A2O43868 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SLC28A2O43868 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC28A2O43868 PCDHAC2-203ENST00000615316 3011 ntBASIC19.09■□□□□ 0.65
SLC28A2O43868 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.08■□□□□ 0.65
SLC28A2O43868 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC28A2O43868 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.08■□□□□ 0.65
SLC28A2O43868 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.08■□□□□ 0.65
SLC28A2O43868 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC28A2O43868 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
SLC28A2O43868 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC28A2O43868 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC28A2O43868 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SLC28A2O43868 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC28A2O43868 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.08■□□□□ 0.64
SLC28A2O43868 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC28A2O43868 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC28A2O43868 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC28A2O43868 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.08■□□□□ 0.64
SLC28A2O43868 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.08■□□□□ 0.64
SLC28A2O43868 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.08■□□□□ 0.64
SLC28A2O43868 AL049597.2-201ENST00000565575 961 ntBASIC19.08■□□□□ 0.64
SLC28A2O43868 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.08■□□□□ 0.64
SLC28A2O43868 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.08■□□□□ 0.64
SLC28A2O43868 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SLC28A2O43868 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC28A2O43868 KRT17P1-201ENST00000399211 1546 ntBASIC19.08■□□□□ 0.64
SLC28A2O43868 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC28A2O43868 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC28A2O43868 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC28A2O43868 AL512408.1-201ENST00000569378 2000 ntBASIC19.08■□□□□ 0.64
SLC28A2O43868 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
SLC28A2O43868 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC28A2O43868 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC28A2O43868 AC092720.2-201ENST00000602388 1665 ntBASIC19.08■□□□□ 0.64
SLC28A2O43868 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC28A2O43868 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
SLC28A2O43868 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.07■□□□□ 0.64
SLC28A2O43868 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A2O43868 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SLC28A2O43868 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A2O43868 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A2O43868 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A2O43868 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.07■□□□□ 0.64
SLC28A2O43868 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A2O43868 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC28A2O43868 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.07■□□□□ 0.64
SLC28A2O43868 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.07■□□□□ 0.64
SLC28A2O43868 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A2O43868 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A2O43868 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A2O43868 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC28A2O43868 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SLC28A2O43868 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC28A2O43868 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SLC28A2O43868 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC28A2O43868 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC28A2O43868 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC28A2O43868 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC28A2O43868 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC28A2O43868 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC28A2O43868 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC28A2O43868 AL355472.2-201ENST00000422958 438 ntBASIC19.06■□□□□ 0.64
SLC28A2O43868 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.06■□□□□ 0.64
SLC28A2O43868 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC28A2O43868 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC28A2O43868 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms