Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDX4O14627 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.24■□□□□ 0.67
CDX4O14627 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CDX4O14627 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CDX4O14627 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDX4O14627 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDX4O14627 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.23■□□□□ 0.67
CDX4O14627 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDX4O14627 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.23■□□□□ 0.67
CDX4O14627 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.23■□□□□ 0.67
CDX4O14627 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDX4O14627 AC096733.2-201ENST00000609937 1394 ntBASIC19.23■□□□□ 0.67
CDX4O14627 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDX4O14627 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDX4O14627 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDX4O14627 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.23■□□□□ 0.67
CDX4O14627 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDX4O14627 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDX4O14627 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.23■□□□□ 0.67
CDX4O14627 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.23■□□□□ 0.67
CDX4O14627 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.23■□□□□ 0.67
CDX4O14627 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.23■□□□□ 0.67
CDX4O14627 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.23■□□□□ 0.67
CDX4O14627 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.23■□□□□ 0.67
CDX4O14627 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.23■□□□□ 0.67
CDX4O14627 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.23■□□□□ 0.67
CDX4O14627 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.23■□□□□ 0.67
CDX4O14627 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
CDX4O14627 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.23■□□□□ 0.67
CDX4O14627 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CDX4O14627 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDX4O14627 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.23■□□□□ 0.67
CDX4O14627 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.23■□□□□ 0.67
CDX4O14627 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDX4O14627 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDX4O14627 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDX4O14627 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDX4O14627 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDX4O14627 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDX4O14627 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.23■□□□□ 0.67
CDX4O14627 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CDX4O14627 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CDX4O14627 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.22■□□□□ 0.67
CDX4O14627 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDX4O14627 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.22■□□□□ 0.67
CDX4O14627 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDX4O14627 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CDX4O14627 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.22■□□□□ 0.67
CDX4O14627 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDX4O14627 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.22■□□□□ 0.67
CDX4O14627 TUBB8P6-201ENST00000436895 1288 ntBASIC19.22■□□□□ 0.67
CDX4O14627 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDX4O14627 YBX1P10-201ENST00000444752 975 ntBASIC19.22■□□□□ 0.67
CDX4O14627 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.22■□□□□ 0.67
CDX4O14627 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDX4O14627 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.22■□□□□ 0.67
CDX4O14627 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.22■□□□□ 0.67
CDX4O14627 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.22■□□□□ 0.67
CDX4O14627 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDX4O14627 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDX4O14627 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDX4O14627 TFP1-202ENST00000475455 1573 ntBASIC19.22■□□□□ 0.67
CDX4O14627 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CDX4O14627 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDX4O14627 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDX4O14627 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.22■□□□□ 0.67
CDX4O14627 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDX4O14627 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDX4O14627 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.21■□□□□ 0.67
CDX4O14627 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CDX4O14627 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDX4O14627 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.21■□□□□ 0.67
CDX4O14627 AC092338.2-201ENST00000568827 1415 ntBASIC19.21■□□□□ 0.67
CDX4O14627 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.21■□□□□ 0.67
CDX4O14627 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.21■□□□□ 0.67
CDX4O14627 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.21■□□□□ 0.67
CDX4O14627 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.21■□□□□ 0.67
CDX4O14627 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDX4O14627 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.21■□□□□ 0.66
CDX4O14627 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDX4O14627 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDX4O14627 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDX4O14627 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
CDX4O14627 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDX4O14627 AC116351.2-201ENST00000606540 1585 ntBASIC19.2■□□□□ 0.66
CDX4O14627 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDX4O14627 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDX4O14627 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDX4O14627 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDX4O14627 AC004951.3-201ENST00000418645 1148 ntBASIC19.2■□□□□ 0.66
CDX4O14627 HOMER2P1-201ENST00000455653 964 ntBASIC19.2■□□□□ 0.66
CDX4O14627 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.2■□□□□ 0.66
CDX4O14627 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.2■□□□□ 0.66
CDX4O14627 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDX4O14627 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.2■□□□□ 0.66
CDX4O14627 CLEC4GP1-201ENST00000596555 870 ntBASIC19.2■□□□□ 0.66
CDX4O14627 AC116407.4-201ENST00000623319 1061 ntBASIC19.2■□□□□ 0.66
CDX4O14627 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.2■□□□□ 0.66
CDX4O14627 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
CDX4O14627 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms