Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM1O00151 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
PDLIM1O00151 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.84■□□□□ 0.61
PDLIM1O00151 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.84■□□□□ 0.61
PDLIM1O00151 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PDLIM1O00151 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM1O00151 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM1O00151 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.84■□□□□ 0.61
PDLIM1O00151 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.84■□□□□ 0.61
PDLIM1O00151 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PDLIM1O00151 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.84■□□□□ 0.61
PDLIM1O00151 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.84■□□□□ 0.61
PDLIM1O00151 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.84■□□□□ 0.61
PDLIM1O00151 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.84■□□□□ 0.61
PDLIM1O00151 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM1O00151 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM1O00151 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PDLIM1O00151 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.84■□□□□ 0.61
PDLIM1O00151 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.84■□□□□ 0.61
PDLIM1O00151 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM1O00151 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM1O00151 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM1O00151 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM1O00151 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PDLIM1O00151 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.84■□□□□ 0.61
PDLIM1O00151 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.83■□□□□ 0.61
PDLIM1O00151 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDLIM1O00151 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.83■□□□□ 0.61
PDLIM1O00151 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDLIM1O00151 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDLIM1O00151 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDLIM1O00151 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.83■□□□□ 0.61
PDLIM1O00151 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDLIM1O00151 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.83■□□□□ 0.6
PDLIM1O00151 KRT18P5-201ENST00000436075 1291 ntBASIC18.83■□□□□ 0.6
PDLIM1O00151 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.83■□□□□ 0.6
PDLIM1O00151 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PDLIM1O00151 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.83■□□□□ 0.6
PDLIM1O00151 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM1O00151 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM1O00151 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
PDLIM1O00151 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM1O00151 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM1O00151 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM1O00151 TREX1-205ENST00000625293 1783 ntBASIC18.83■□□□□ 0.6
PDLIM1O00151 AP004607.4-201ENST00000530158 1459 ntBASIC18.83■□□□□ 0.6
PDLIM1O00151 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM1O00151 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM1O00151 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM1O00151 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM1O00151 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PDLIM1O00151 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM1O00151 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM1O00151 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.82■□□□□ 0.6
PDLIM1O00151 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PDLIM1O00151 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM1O00151 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.82■□□□□ 0.6
PDLIM1O00151 TMEM179-206ENST00000616017 1645 ntBASIC18.82■□□□□ 0.6
PDLIM1O00151 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM1O00151 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM1O00151 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM1O00151 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PDLIM1O00151 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM1O00151 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM1O00151 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM1O00151 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.82■□□□□ 0.6
PDLIM1O00151 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.82■□□□□ 0.6
PDLIM1O00151 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.82■□□□□ 0.6
PDLIM1O00151 KRT18P61-201ENST00000585825 1298 ntBASIC18.82■□□□□ 0.6
PDLIM1O00151 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.82■□□□□ 0.6
PDLIM1O00151 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM1O00151 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM1O00151 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM1O00151 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM1O00151 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM1O00151 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM1O00151 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PDLIM1O00151 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.82■□□□□ 0.6
PDLIM1O00151 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.82■□□□□ 0.6
PDLIM1O00151 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM1O00151 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM1O00151 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM1O00151 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PDLIM1O00151 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PDLIM1O00151 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM1O00151 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.81■□□□□ 0.6
PDLIM1O00151 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.81■□□□□ 0.6
PDLIM1O00151 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
PDLIM1O00151 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM1O00151 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM1O00151 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM1O00151 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM1O00151 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM1O00151 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PDLIM1O00151 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM1O00151 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.81■□□□□ 0.6
PDLIM1O00151 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.81■□□□□ 0.6
PDLIM1O00151 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM1O00151 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.81■□□□□ 0.6
PDLIM1O00151 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms