Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HTR3EA5X5Y0 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.32■□□□□ 0.52
HTR3EA5X5Y0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HTR3EA5X5Y0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HTR3EA5X5Y0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HTR3EA5X5Y0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HTR3EA5X5Y0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HTR3EA5X5Y0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
HTR3EA5X5Y0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HTR3EA5X5Y0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HTR3EA5X5Y0 AC007613.1-201ENST00000572811 2597 ntBASIC18.31■□□□□ 0.52
HTR3EA5X5Y0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HTR3EA5X5Y0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HTR3EA5X5Y0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HTR3EA5X5Y0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.31■□□□□ 0.52
HTR3EA5X5Y0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HTR3EA5X5Y0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HTR3EA5X5Y0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.31■□□□□ 0.52
HTR3EA5X5Y0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.31■□□□□ 0.52
HTR3EA5X5Y0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HTR3EA5X5Y0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.31■□□□□ 0.52
HTR3EA5X5Y0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.31■□□□□ 0.52
HTR3EA5X5Y0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HTR3EA5X5Y0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HTR3EA5X5Y0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 TCF3P1-201ENST00000423021 1937 ntBASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HTR3EA5X5Y0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HTR3EA5X5Y0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
HTR3EA5X5Y0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.28■□□□□ 0.52
HTR3EA5X5Y0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HTR3EA5X5Y0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HTR3EA5X5Y0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HTR3EA5X5Y0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HTR3EA5X5Y0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.28■□□□□ 0.52
HTR3EA5X5Y0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.28■□□□□ 0.52
HTR3EA5X5Y0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.28■□□□□ 0.52
HTR3EA5X5Y0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.28■□□□□ 0.52
HTR3EA5X5Y0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.28■□□□□ 0.52
HTR3EA5X5Y0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.28■□□□□ 0.52
HTR3EA5X5Y0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HTR3EA5X5Y0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
HTR3EA5X5Y0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HTR3EA5X5Y0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HTR3EA5X5Y0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HTR3EA5X5Y0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HTR3EA5X5Y0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.28■□□□□ 0.52
HTR3EA5X5Y0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HTR3EA5X5Y0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HTR3EA5X5Y0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HTR3EA5X5Y0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms