Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC13.81□□□□□ -0.2
TRBV6-8A0A0A6YYG3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-8A0A0A6YYG3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-8A0A0A6YYG3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-8A0A0A6YYG3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-8A0A0A6YYG3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-8A0A0A6YYG3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC13.81□□□□□ -0.2
TRBV6-8A0A0A6YYG3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-8A0A0A6YYG3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-8A0A0A6YYG3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-8A0A0A6YYG3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TRBV6-8A0A0A6YYG3 AC022517.1-201ENST00000592429 346 ntBASIC13.81□□□□□ -0.2
TRBV6-8A0A0A6YYG3 AC005181.1-201ENST00000604782 1256 ntBASIC13.81□□□□□ -0.2
TRBV6-8A0A0A6YYG3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-8A0A0A6YYG3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC13.81□□□□□ -0.2
TRBV6-8A0A0A6YYG3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-8A0A0A6YYG3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.81□□□□□ -0.2
TRBV6-8A0A0A6YYG3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC13.81□□□□□ -0.2
TRBV6-8A0A0A6YYG3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.81□□□□□ -0.2
TRBV6-8A0A0A6YYG3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-8A0A0A6YYG3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV6-8A0A0A6YYG3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 AP001271.2-201ENST00000624018 1556 ntBASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 C2orf69P4-201ENST00000565394 541 ntBASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TRBV6-8A0A0A6YYG3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 AC023632.3-201ENST00000521633 145 ntBASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRBV6-8A0A0A6YYG3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms