Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 KIAA0556-209ENST00000573850 3237 ntTSL 58.36□□□□□ -1.072e-6■□□□□ 9.4
PRPF8Q6P2Q9 KIAA0556-206ENST00000567894 2262 ntTSL 26.94□□□□□ -1.32e-6■□□□□ 9.4
PRPF8Q6P2Q9 FYTTD1-202ENST00000412924 998 ntTSL 518.44■□□□□ 0.541e-7■□□□□ 9.4
PRPF8Q6P2Q9 FYTTD1-206ENST00000426031 491 ntTSL 316.46■□□□□ 0.231e-7■□□□□ 9.4
PRPF8Q6P2Q9 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.451e-7■□□□□ 9.4
PRPF8Q6P2Q9 FYTTD1-204ENST00000418169 593 ntTSL 58.38□□□□□ -1.071e-7■□□□□ 9.4
PRPF8Q6P2Q9 FYTTD1-203ENST00000415708 1342 ntTSL 2 BASIC6.93□□□□□ -1.31e-7■□□□□ 9.4
PRPF8Q6P2Q9 FYTTD1-207ENST00000428738 718 ntTSL 53.32□□□□□ -1.881e-7■□□□□ 9.4
PRPF8Q6P2Q9 FYTTD1-209ENST00000494309 719 ntTSL 52.02□□□□□ -2.091e-7■□□□□ 9.4
PRPF8Q6P2Q9 RNF207-203ENST00000466994 1854 ntTSL 215.11■□□□□ 0.013e-11■□□□□ 9.4
PRPF8Q6P2Q9 RNF207-205ENST00000484435 551 ntTSL 1 (best)13.89□□□□□ -0.193e-11■□□□□ 9.4
PRPF8Q6P2Q9 AC004381.2-201ENST00000637768 1329 ntBASIC8.07□□□□□ -1.123e-11■□□□□ 9.4
PRPF8Q6P2Q9 COX6A1-203ENST00000550009 572 ntTSL 213.79□□□□□ -0.23e-8■□□□□ 9.4
PRPF8Q6P2Q9 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.23e-8■□□□□ 9.4
PRPF8Q6P2Q9 HDAC11-207ENST00000405478 799 ntTSL 522.82■■□□□ 1.242e-8■□□□□ 9.4
PRPF8Q6P2Q9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.39■■□□□ 1.172e-8■□□□□ 9.4
PRPF8Q6P2Q9 HDAC11-209ENST00000418189 580 ntTSL 521.4■■□□□ 1.022e-8■□□□□ 9.4
PRPF8Q6P2Q9 AGBL5-210ENST00000489683 1850 ntTSL 520.46■□□□□ 0.872e-8■□□□□ 9.4
PRPF8Q6P2Q9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.852e-8■□□□□ 9.4
PRPF8Q6P2Q9 CMPK1-202ENST00000371871 1212 ntTSL 219.47■□□□□ 0.711e-15■□□□□ 9.4
PRPF8Q6P2Q9 CRLF1-203ENST00000594325 1020 ntTSL 319.28■□□□□ 0.682e-8■□□□□ 9.4
PRPF8Q6P2Q9 HDAC11-217ENST00000475818 1271 ntTSL 318.24■□□□□ 0.512e-8■□□□□ 9.4
PRPF8Q6P2Q9 AGBL5-208ENST00000477136 2165 ntTSL 218.22■□□□□ 0.512e-8■□□□□ 9.4
PRPF8Q6P2Q9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.422e-8■□□□□ 9.4
PRPF8Q6P2Q9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.95■□□□□ 0.32e-8■□□□□ 9.4
PRPF8Q6P2Q9 HDAC11-208ENST00000416248 580 ntTSL 416.94■□□□□ 0.32e-8■□□□□ 9.4
PRPF8Q6P2Q9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.67■□□□□ 0.262e-8■□□□□ 9.4
PRPF8Q6P2Q9 HDAC11-212ENST00000434848 520 ntTSL 416.67■□□□□ 0.262e-8■□□□□ 9.4
PRPF8Q6P2Q9 HDAC11-218ENST00000487585 610 ntTSL 416.67■□□□□ 0.262e-8■□□□□ 9.4
PRPF8Q6P2Q9 FAM120C-204ENST00000497680 637 ntTSL 216.45■□□□□ 0.222e-8■□□□□ 9.4
PRPF8Q6P2Q9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.41■□□□□ 0.222e-8■□□□□ 9.4
PRPF8Q6P2Q9 CMPK1-201ENST00000371870 812 ntTSL 216.39■□□□□ 0.211e-15■□□□□ 9.4
PRPF8Q6P2Q9 HDAC11-216ENST00000458642 574 ntTSL 516.22■□□□□ 0.192e-8■□□□□ 9.4
PRPF8Q6P2Q9 DGKZ-213ENST00000527903 617 ntTSL 416.22■□□□□ 0.192e-8■□□□□ 9.4
PRPF8Q6P2Q9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.99■□□□□ 0.152e-8■□□□□ 9.4
PRPF8Q6P2Q9 HDAC11-215ENST00000455904 731 ntTSL 215.99■□□□□ 0.152e-8■□□□□ 9.4
PRPF8Q6P2Q9 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.41■□□□□ 0.061e-15■□□□□ 9.4
PRPF8Q6P2Q9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.012e-8■□□□□ 9.4
PRPF8Q6P2Q9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.57□□□□□ -0.082e-8■□□□□ 9.4
PRPF8Q6P2Q9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.242e-8■□□□□ 9.4
PRPF8Q6P2Q9 HDAC11-210ENST00000425430 1021 ntTSL 213.36□□□□□ -0.272e-8■□□□□ 9.4
PRPF8Q6P2Q9 AGBL5-209ENST00000487078 3261 ntTSL 1 (best)13.3□□□□□ -0.282e-8■□□□□ 9.4
PRPF8Q6P2Q9 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.341e-15■□□□□ 9.4
PRPF8Q6P2Q9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.32□□□□□ -0.442e-8■□□□□ 9.4
PRPF8Q6P2Q9 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.522e-8■□□□□ 9.4
PRPF8Q6P2Q9 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.532e-8■□□□□ 9.4
PRPF8Q6P2Q9 PCBP4-204ENST00000461544 562 ntTSL 411.34□□□□□ -0.593e-8■□□□□ 9.4
PRPF8Q6P2Q9 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC11.33□□□□□ -0.61e-15■□□□□ 9.4
PRPF8Q6P2Q9 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.652e-8■□□□□ 9.4
PRPF8Q6P2Q9 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.672e-8■□□□□ 9.4
PRPF8Q6P2Q9 PANK3-203ENST00000522176 552 ntTSL 59.71□□□□□ -0.852e-8■□□□□ 9.4
PRPF8Q6P2Q9 PVRIG2P-201ENST00000435460 978 ntBASIC15.57■□□□□ 0.084e-11■□□□□ 9.4
PRPF8Q6P2Q9 SCML1-205ENST00000419185 817 ntTSL 311.98□□□□□ -0.495e-17■□□□□ 9.4
PRPF8Q6P2Q9 ASNS-210ENST00000448127 579 ntTSL 27.12□□□□□ -1.275e-11■□□□□ 9.4
PRPF8Q6P2Q9 ASNS-207ENST00000437657 745 ntTSL 56.73□□□□□ -1.335e-11■□□□□ 9.4
PRPF8Q6P2Q9 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.064e-7■□□□□ 9.4
PRPF8Q6P2Q9 CISD3-206ENST00000619858 2326 ntTSL 1 (best)14.65□□□□□ -0.064e-7■□□□□ 9.4
PRPF8Q6P2Q9 STARD10-215ENST00000540587 558 ntTSL 411.41□□□□□ -0.581e-9■□□□□ 9.3
PRPF8Q6P2Q9 STAU1-209ENST00000456866 643 ntTSL 59.65□□□□□ -0.875e-19■□□□□ 9.3
PRPF8Q6P2Q9 PGD-209ENST00000496718 506 ntTSL 210.15□□□□□ -0.795e-7■□□□□ 9.3
PRPF8Q6P2Q9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.18e-7■□□□□ 9.3
PRPF8Q6P2Q9 ALDOC-209ENST00000584086 686 ntTSL 312.52□□□□□ -0.418e-7■□□□□ 9.3
PRPF8Q6P2Q9 ALDOC-208ENST00000582381 571 ntTSL 211.19□□□□□ -0.628e-7■□□□□ 9.3
PRPF8Q6P2Q9 ALDOC-207ENST00000581807 580 ntTSL 310.74□□□□□ -0.698e-7■□□□□ 9.3
PRPF8Q6P2Q9 ALDOC-202ENST00000395319 1519 ntTSL 5 BASIC10.2□□□□□ -0.788e-7■□□□□ 9.3
PRPF8Q6P2Q9 ALDOC-203ENST00000395321 1722 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.98e-7■□□□□ 9.3
PRPF8Q6P2Q9 ALDOC-206ENST00000578590 839 ntTSL 49.27□□□□□ -0.928e-7■□□□□ 9.3
PRPF8Q6P2Q9 ALDOC-204ENST00000435638 579 ntTSL 38.5□□□□□ -1.058e-7■□□□□ 9.3
PRPF8Q6P2Q9 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.321e-7■□□□□ 9.3
PRPF8Q6P2Q9 SMAD6-202ENST00000557916 1401 ntTSL 1 (best)21.28■■□□□ 19e-6■□□□□ 9.3
PRPF8Q6P2Q9 YIF1B-208ENST00000587361 579 ntTSL 319.79■□□□□ 0.769e-6■□□□□ 9.3
PRPF8Q6P2Q9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.79■□□□□ 0.69e-6■□□□□ 9.3
PRPF8Q6P2Q9 CEP104-203ENST00000428079 918 ntTSL 518.79■□□□□ 0.69e-6■□□□□ 9.3
PRPF8Q6P2Q9 C12orf57-203ENST00000538392 979 ntTSL 216.16■□□□□ 0.189e-6■□□□□ 9.3
PRPF8Q6P2Q9 DDX3X-214ENST00000622373 2129 nt16.04■□□□□ 0.168e-10■□□□□ 9.3
PRPF8Q6P2Q9 ZCCHC11-210ENST00000473856 2047 ntTSL 1 (best)15.01□□□□□ -0.018e-8■□□□□ 9.3
PRPF8Q6P2Q9 YIF1B-207ENST00000587039 466 ntTSL 513.37□□□□□ -0.279e-6■□□□□ 9.3
PRPF8Q6P2Q9 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.299e-6■□□□□ 9.3
PRPF8Q6P2Q9 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.19□□□□□ -0.39e-6■□□□□ 9.3
PRPF8Q6P2Q9 PSMD5-AS1-211ENST00000640066 1970 ntTSL 1 (best)13.11□□□□□ -0.319e-6■□□□□ 9.3
PRPF8Q6P2Q9 SMAD6-203ENST00000558937 632 ntTSL 513□□□□□ -0.339e-6■□□□□ 9.3
PRPF8Q6P2Q9 SMAD6-204ENST00000559931 573 ntTSL 311.85□□□□□ -0.519e-6■□□□□ 9.3
PRPF8Q6P2Q9 SUPT5H-218ENST00000600818 718 ntTSL 211.58□□□□□ -0.569e-6■□□□□ 9.3
PRPF8Q6P2Q9 PSMD5-AS1-214ENST00000640391 707 ntTSL 211.5□□□□□ -0.579e-6■□□□□ 9.3
PRPF8Q6P2Q9 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC11.39□□□□□ -0.599e-6■□□□□ 9.3
PRPF8Q6P2Q9 MEIS2-219ENST00000560697 552 ntTSL 49.99□□□□□ -0.819e-6■□□□□ 9.3
PRPF8Q6P2Q9 PARP1-206ENST00000469663 542 ntTSL 39.57□□□□□ -0.889e-6■□□□□ 9.3
PRPF8Q6P2Q9 NSD3-204ENST00000525081 1581 ntTSL 29.54□□□□□ -0.889e-6■□□□□ 9.3
PRPF8Q6P2Q9 C12orf57-201ENST00000229281 560 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.889e-6■□□□□ 9.3
PRPF8Q6P2Q9 C12orf57-202ENST00000537087 662 ntTSL 2 BASIC9.53□□□□□ -0.889e-6■□□□□ 9.3
PRPF8Q6P2Q9 MEIS2-218ENST00000560617 605 ntTSL 39.26□□□□□ -0.939e-6■□□□□ 9.3
PRPF8Q6P2Q9 FAM117A-211ENST00000514841 480 ntTSL 48.58□□□□□ -1.049e-6■□□□□ 9.3
PRPF8Q6P2Q9 CYFIP1-212ENST00000621036 585 ntTSL 38.4□□□□□ -1.069e-6■□□□□ 9.3
PRPF8Q6P2Q9 FAM117A-207ENST00000509347 572 ntTSL 48.13□□□□□ -1.119e-6■□□□□ 9.3
PRPF8Q6P2Q9 C12orf57-207ENST00000545581 556 ntTSL 38.04□□□□□ -1.129e-6■□□□□ 9.3
PRPF8Q6P2Q9 PABPC4-218ENST00000513632 738 ntTSL 27.77□□□□□ -1.179e-6■□□□□ 9.3
PRPF8Q6P2Q9 C12orf57-205ENST00000542222 640 ntTSL 27.72□□□□□ -1.179e-6■□□□□ 9.3
PRPF8Q6P2Q9 FAM117A-203ENST00000503720 528 ntTSL 47.12□□□□□ -1.279e-6■□□□□ 9.3
PRPF8Q6P2Q9 LCP2-210ENST00000628092 2421 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.39e-6■□□□□ 9.3
PRPF8Q6P2Q9 PSMD5-AS1-210ENST00000639576 906 ntTSL 56.8□□□□□ -1.329e-6■□□□□ 9.3
Retrieved 100 of 73,762 protein–RNA pairs in 452.3 ms