Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 AC090971.3-201ENST00000557871 1041 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 AC087477.6-201ENST00000559595 843 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 JPT1-211ENST00000581874 517 ntTSL 5 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 MIR4637-201ENST00000582405 84 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 AC010928.3-201ENST00000587712 541 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 AC063977.5-201ENST00000601044 974 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 AL358335.3-201ENST00000604678 327 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 Metazoa_SRP.46-201ENST00000611137 251 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 AC073569.3-201ENST00000619055 682 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 AC138649.3-201ENST00000622154 254 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 AC124864.2-201ENST00000624736 186 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 LINC01176-202ENST00000628121 716 ntTSL 3 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 PUS3-201ENST00000227474 1843 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SCUBE3Q8IX30 CYP4A11-203ENST00000371905 1725 ntTSL 1 (best) BASIC8.79□□□□□ -1
SCUBE3Q8IX30 MSL3-203ENST00000361672 2256 ntTSL 2 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 AC073349.2-201ENST00000427545 1603 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC8.79□□□□□ -1
SCUBE3Q8IX30 PARP15-201ENST00000310366 1518 ntTSL 1 (best) BASIC8.79□□□□□ -1
SCUBE3Q8IX30 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC8.79□□□□□ -1
SCUBE3Q8IX30 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 KAT14-206ENST00000489634 3152 ntTSL 1 (best) BASIC8.79□□□□□ -1
SCUBE3Q8IX30 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 AC068044.1-201ENST00000441585 1978 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 CPEB1-AS1-202ENST00000618020 2994 ntBASIC8.79□□□□□ -1
SCUBE3Q8IX30 LINC00547-201ENST00000612438 3314 ntTSL 2 BASIC8.79□□□□□ -1
SCUBE3Q8IX30 SEPT4-202ENST00000317268 1784 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
SCUBE3Q8IX30 ZKSCAN3-202ENST00000341464 1794 ntTSL 2 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC8.78□□□□□ -1
SCUBE3Q8IX30 AC009090.4-201ENST00000623921 3691 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SCUBE3Q8IX30 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC8.78□□□□□ -1
SCUBE3Q8IX30 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC8.78□□□□□ -1
SCUBE3Q8IX30 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
SCUBE3Q8IX30 SEPT4-211ENST00000579371 1362 ntTSL 5 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
SCUBE3Q8IX30 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
SCUBE3Q8IX30 HNRNPDL-204ENST00000507721 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
SCUBE3Q8IX30 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
SCUBE3Q8IX30 SERPINB12-201ENST00000269491 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SCUBE3Q8IX30 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SCUBE3Q8IX30 RNU6-332P-201ENST00000391193 108 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 AL356432.2-201ENST00000407841 422 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 TMEM139-202ENST00000409102 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SCUBE3Q8IX30 RN7SKP127-201ENST00000410443 354 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 RN7SKP56-201ENST00000410513 331 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 LINC00426-202ENST00000417079 1045 ntTSL 3 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 ZYG11AP1-201ENST00000430329 837 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 RPS28P8-201ENST00000435020 208 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 ACTBP12-201ENST00000435871 418 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 AC005099.1-201ENST00000442083 610 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC8.78□□□□□ -1
SCUBE3Q8IX30 GAPDHP28-201ENST00000455134 1003 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 RN7SL854P-201ENST00000459767 295 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 RPS27P12-201ENST00000464146 258 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 RN7SL130P-201ENST00000489463 305 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 BX293995.1-201ENST00000502880 755 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 GSTO3P-201ENST00000504733 718 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC8.78□□□□□ -1
SCUBE3Q8IX30 SNRPCP8-201ENST00000514820 211 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 RN7SKP141-201ENST00000516167 338 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 AC060765.1-202ENST00000518367 257 ntTSL 3 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 AC025252.2-201ENST00000537470 502 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 AP002991.1-201ENST00000539305 574 ntTSL 4 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 AC008147.3-201ENST00000548666 354 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 AC025198.1-201ENST00000578331 419 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC8.78□□□□□ -1
SCUBE3Q8IX30 AC103881.1-201ENST00000603476 538 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 OR1X1P-201ENST00000606159 931 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 LINC02391-201ENST00000615716 800 ntTSL 5 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 WDR11-AS1-203ENST00000598981 2242 ntTSL 5 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SCUBE3Q8IX30 TOM1L1-203ENST00000536554 1522 ntTSL 2 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
SCUBE3Q8IX30 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC8.78□□□□□ -1
SCUBE3Q8IX30 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 AC010680.2-201ENST00000603521 2117 ntBASIC8.78□□□□□ -1
SCUBE3Q8IX30 PTPDC1-201ENST00000288976 4398 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
SCUBE3Q8IX30 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 EIF3H-201ENST00000276682 2041 ntTSL 2 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 AL513318.2-201ENST00000602579 2012 ntTSL 1 (best) BASIC8.78□□□□□ -1
SCUBE3Q8IX30 SLAMF7-211ENST00000621377 2608 ntTSL 2 BASIC8.78□□□□□ -1
SCUBE3Q8IX30 MS4A10-201ENST00000308287 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms