RNA–Protein interactions for RNA: ENST00000453121.1

NEGR1-IT1-201, NEGR1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene NEGR1-IT1, Length 534 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEGR1-IT1-201ENST00000453121 AEBP2Q6ZN18 517 aaPredicted RBP22.26■■□□□ 1.15
NEGR1-IT1-201ENST00000453121 CHIC1Q5VXU3 224 aa21.48■■□□□ 1.03
NEGR1-IT1-201ENST00000453121 SENP3Q9H4L4 574 aaPredicted RBP18.93■□□□□ 0.62
NEGR1-IT1-201ENST00000453121 PHF23Q9BUL5 403 aaPredicted RBP18.86■□□□□ 0.61
NEGR1-IT1-201ENST00000453121 FOXD1Q16676 465 aa17.61■□□□□ 0.41
NEGR1-IT1-201ENST00000453121 PLPPR3Q6T4P5 718 aa17.32■□□□□ 0.36
NEGR1-IT1-201ENST00000453121 POTEDQ86YR6 584 aa16.74■□□□□ 0.27
NEGR1-IT1-201ENST00000453121 PPP6R1Q9UPN7 881 aa16.73■□□□□ 0.27
NEGR1-IT1-201ENST00000453121 ADRA2BP18089 450 aa16.69■□□□□ 0.26
NEGR1-IT1-201ENST00000453121 PIAS4Q8N2W9 510 aaPredicted RBP16.53■□□□□ 0.24
NEGR1-IT1-201ENST00000453121 MSH5O43196 834 aa16.35■□□□□ 0.21
NEGR1-IT1-201ENST00000453121 SCAF1Q9H7N4 1312 aaKnown RBP15.29■□□□□ 0.04
NEGR1-IT1-201ENST00000453121 MAPK8IP2Q13387 824 aaPredicted RBP15.23■□□□□ 0.03
NEGR1-IT1-201ENST00000453121 PPP4R3CPQ6ZMV5 832 aa15.22■□□□□ 0.03
NEGR1-IT1-201ENST00000453121 DMRT2Q9Y5R5 561 aa15.07■□□□□ 0
NEGR1-IT1-201ENST00000453121 CNKSR2Q8WXI2 1034 aa14.86□□□□□ -0.03
NEGR1-IT1-201ENST00000453121 KCNA4P22459 653 aa14.76□□□□□ -0.05
NEGR1-IT1-201ENST00000453121 NCBP3Q53F19 620 aaKnown RBP14.74□□□□□ -0.05
NEGR1-IT1-201ENST00000453121 HOXD11P31277 338 aaPredicted RBP14.66□□□□□ -0.06
NEGR1-IT1-201ENST00000453121 RNF216Q9NWF9 866 aaPredicted RBP14.64□□□□□ -0.07
NEGR1-IT1-201ENST00000453121 NPM3O75607 178 aaKnown RBP14.53□□□□□ -0.08
NEGR1-IT1-201ENST00000453121 DCAF8L1A6NGE4 600 aa14.42□□□□□ -0.1
NEGR1-IT1-201ENST00000453121 DNAJC5BQ9UF47 199 aa14.17□□□□□ -0.14
NEGR1-IT1-201ENST00000453121 SLC4A1APQ9BWU0 796 aaKnown RBP14.03□□□□□ -0.16
NEGR1-IT1-201ENST00000453121 RNF39Q9H2S5 420 aa13.99□□□□□ -0.17
NEGR1-IT1-201ENST00000453121 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.95□□□□□ -0.18
NEGR1-IT1-201ENST00000453121 CACNB1Q02641 598 aaPredicted RBP13.83□□□□□ -0.2
NEGR1-IT1-201ENST00000453121 C1QBPQ07021 282 aaKnown RBP13.8□□□□□ -0.2
NEGR1-IT1-201ENST00000453121 SLC4A2P04920 1241 aa13.78□□□□□ -0.2
NEGR1-IT1-201ENST00000453121 U3KPZ7 1027 aaPredicted RBP13.7□□□□□ -0.22
NEGR1-IT1-201ENST00000453121 EHMT2Q96KQ7 1210 aa13.68□□□□□ -0.22
NEGR1-IT1-201ENST00000453121 ZBTB22O15209 634 aa13.59□□□□□ -0.23
NEGR1-IT1-201ENST00000453121 CSRNP3Q8WYN3 585 aa13.54□□□□□ -0.24
NEGR1-IT1-201ENST00000453121 FOXD4L1Q9NU39 408 aa13.54□□□□□ -0.24
NEGR1-IT1-201ENST00000453121 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.44□□□□□ -0.26
NEGR1-IT1-201ENST00000453121 HNRNPUL2Q1KMD3 747 aaKnown RBP13.44□□□□□ -0.26
NEGR1-IT1-201ENST00000453121 MYCNP04198 464 aaPredicted RBP13.42□□□□□ -0.26
NEGR1-IT1-201ENST00000453121 SPINK5Q9NQ38 1064 aaPredicted RBP13.4□□□□□ -0.26
NEGR1-IT1-201ENST00000453121 SAMD1Q6SPF0 538 aaPredicted RBP13.38□□□□□ -0.27
NEGR1-IT1-201ENST00000453121 CAPN15O75808 1086 aa13.36□□□□□ -0.27
NEGR1-IT1-201ENST00000453121 APLP2Q06481 763 aa13.36□□□□□ -0.27
NEGR1-IT1-201ENST00000453121 TRHP20396 242 aaPredicted RBP13.22□□□□□ -0.29
NEGR1-IT1-201ENST00000453121 ZNF219Q9P2Y4 722 aaPredicted RBP13.22□□□□□ -0.29
NEGR1-IT1-201ENST00000453121 DSG3P32926 999 aa13.21□□□□□ -0.29
NEGR1-IT1-201ENST00000453121 ATF5Q9Y2D1 282 aaPredicted RBP13.1□□□□□ -0.31
NEGR1-IT1-201ENST00000453121 ABCB7O75027 752 aa13.08□□□□□ -0.32
NEGR1-IT1-201ENST00000453121 ATXN8OSP0DMR3 200 aa13.05□□□□□ -0.32
NEGR1-IT1-201ENST00000453121 POLA2Q14181 598 aa12.96□□□□□ -0.33
NEGR1-IT1-201ENST00000453121 POTEHQ6S545 545 aa12.94□□□□□ -0.34
NEGR1-IT1-201ENST00000453121 ZBTB12Q9Y330 459 aaPredicted RBP12.72□□□□□ -0.37
NEGR1-IT1-201ENST00000453121 RBM42Q9BTD8 480 aaKnown RBP12.59□□□□□ -0.39
NEGR1-IT1-201ENST00000453121 FBLN2P98095 1184 aa12.55□□□□□ -0.4
NEGR1-IT1-201ENST00000453121 OSCARQ8IYS5 282 aa12.52□□□□□ -0.41
NEGR1-IT1-201ENST00000453121 MKRN4PQ13434 485 aaPredicted RBP12.5□□□□□ -0.41
NEGR1-IT1-201ENST00000453121 AKT1S1Q96B36 256 aa12.38□□□□□ -0.43
NEGR1-IT1-201ENST00000453121 SPDYE2BA6NHP3 402 aa12.36□□□□□ -0.43
NEGR1-IT1-201ENST00000453121 SPDYE6P0CI01 402 aa12.36□□□□□ -0.43
NEGR1-IT1-201ENST00000453121 SPDYE2Q495Y8 402 aa12.36□□□□□ -0.43
NEGR1-IT1-201ENST00000453121 ZNF692Q9BU19 519 aaPredicted RBP12.27□□□□□ -0.45
NEGR1-IT1-201ENST00000453121 REM2Q8IYK8 340 aaPredicted RBP12.26□□□□□ -0.45
NEGR1-IT1-201ENST00000453121 SSUH2Q9Y2M2 353 aa12.23□□□□□ -0.45
NEGR1-IT1-201ENST00000453121 FKBP8Q14318 412 aa12.21□□□□□ -0.45
NEGR1-IT1-201ENST00000453121 CHRDL2Q6WN34 429 aa12.18□□□□□ -0.46
NEGR1-IT1-201ENST00000453121 SPDYE4A6NLX3 237 aa12.16□□□□□ -0.46
NEGR1-IT1-201ENST00000453121 PITPNM1O00562 1244 aa12.12□□□□□ -0.47
NEGR1-IT1-201ENST00000453121 PABPN1Q86U42 306 aaKnown RBP eCLIP12.09□□□□□ -0.47
NEGR1-IT1-201ENST00000453121 SPDYE1Q8NFV5 336 aaPredicted RBP12.05□□□□□ -0.48
NEGR1-IT1-201ENST00000453121 CLEC11AQ9Y240 323 aa12.01□□□□□ -0.49
NEGR1-IT1-201ENST00000453121 PROM2Q8N271 834 aa11.97□□□□□ -0.49
NEGR1-IT1-201ENST00000453121 PIP4P2Q8N4L2 257 aa11.97□□□□□ -0.49
NEGR1-IT1-201ENST00000453121 FXR2P51116 673 aaKnown RBP eCLIP11.96□□□□□ -0.49
NEGR1-IT1-201ENST00000453121 PRR29P0C7W0 189 aa11.87□□□□□ -0.51
NEGR1-IT1-201ENST00000453121 STAG3Q9UJ98 1225 aa11.84□□□□□ -0.51
NEGR1-IT1-201ENST00000453121 PRKAR2AP13861 404 aaKnown RBP11.81□□□□□ -0.52
NEGR1-IT1-201ENST00000453121 CHADLQ6NUI6 762 aa11.75□□□□□ -0.53
NEGR1-IT1-201ENST00000453121 FBXO3Q9UK99 471 aa11.74□□□□□ -0.53
NEGR1-IT1-201ENST00000453121 HAX1O00165 279 aa11.65□□□□□ -0.54
NEGR1-IT1-201ENST00000453121 SP7Q8TDD2 431 aaPredicted RBP11.65□□□□□ -0.54
NEGR1-IT1-201ENST00000453121 CREBZFQ9NS37 354 aa11.65□□□□□ -0.54
NEGR1-IT1-201ENST00000453121 FARP1Q9Y4F1 1045 aaPredicted RBP11.62□□□□□ -0.55
NEGR1-IT1-201ENST00000453121 VASPP50552 380 aaPredicted RBP11.6□□□□□ -0.55
NEGR1-IT1-201ENST00000453121 C19orf67A6NJJ6 358 aa11.56□□□□□ -0.56
NEGR1-IT1-201ENST00000453121 EVX2Q03828 476 aa11.54□□□□□ -0.56
NEGR1-IT1-201ENST00000453121 MIER1Q8N108 512 aa11.53□□□□□ -0.56
NEGR1-IT1-201ENST00000453121 MNX1P50219 401 aaPredicted RBP11.51□□□□□ -0.57
NEGR1-IT1-201ENST00000453121 PLCD3Q8N3E9 789 aa11.5□□□□□ -0.57
NEGR1-IT1-201ENST00000453121 IFNLR1Q8IU57 520 aaPredicted RBP11.47□□□□□ -0.57
NEGR1-IT1-201ENST00000453121 PLEKHG5O94827 1062 aa11.46□□□□□ -0.57
NEGR1-IT1-201ENST00000453121 CD44P16070 742 aaKnown RBP11.46□□□□□ -0.57
NEGR1-IT1-201ENST00000453121 NPM1P06748 294 aaKnown RBP eCLIP11.45□□□□□ -0.58
NEGR1-IT1-201ENST00000453121 KLHL34Q8N239 644 aa11.39□□□□□ -0.59
NEGR1-IT1-201ENST00000453121 ZRANB1Q9UGI0 708 aa11.35□□□□□ -0.59
NEGR1-IT1-201ENST00000453121 ZBTB47Q9UFB7 747 aaPredicted RBP11.34□□□□□ -0.59
NEGR1-IT1-201ENST00000453121 PAK3O75914 559 aaPredicted RBP11.33□□□□□ -0.6
NEGR1-IT1-201ENST00000453121 GABBR2O75899 941 aa11.3□□□□□ -0.6
NEGR1-IT1-201ENST00000453121 ZNF579Q8NAF0 562 aaKnown RBP11.3□□□□□ -0.6
NEGR1-IT1-201ENST00000453121 SPOCK2Q92563 424 aa11.3□□□□□ -0.6
NEGR1-IT1-201ENST00000453121 CLCN6P51797 869 aa11.26□□□□□ -0.61
NEGR1-IT1-201ENST00000453121 NUBP1P53384 320 aa11.25□□□□□ -0.61
NEGR1-IT1-201ENST00000453121 TSPYL2Q9H2G4 693 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms