RNA–Protein interactions for RNA: ENST00000410513.1

RN7SKP56-201, Transcript of RNA, 7SK small nuclear pseudogene 56, humanhuman

BASIC

Gene RN7SKP56, Length 331 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP56-201ENST00000410513 AEBP2Q6ZN18 517 aaPredicted RBP21.97■■□□□ 1.11
RN7SKP56-201ENST00000410513 CHIC1Q5VXU3 224 aa21.29■■□□□ 1
RN7SKP56-201ENST00000410513 PHF23Q9BUL5 403 aaPredicted RBP18.78■□□□□ 0.6
RN7SKP56-201ENST00000410513 SENP3Q9H4L4 574 aaPredicted RBP18.54■□□□□ 0.56
RN7SKP56-201ENST00000410513 FOXD1Q16676 465 aa17.29■□□□□ 0.36
RN7SKP56-201ENST00000410513 PLPPR3Q6T4P5 718 aa17.2■□□□□ 0.34
RN7SKP56-201ENST00000410513 PPP6R1Q9UPN7 881 aa16.61■□□□□ 0.25
RN7SKP56-201ENST00000410513 ADRA2BP18089 450 aa16.56■□□□□ 0.24
RN7SKP56-201ENST00000410513 PIAS4Q8N2W9 510 aaPredicted RBP16.23■□□□□ 0.19
RN7SKP56-201ENST00000410513 MSH5O43196 834 aa15.89■□□□□ 0.13
RN7SKP56-201ENST00000410513 POTEDQ86YR6 584 aa15.58■□□□□ 0.08
RN7SKP56-201ENST00000410513 PPP4R3CPQ6ZMV5 832 aa15.18■□□□□ 0.02
RN7SKP56-201ENST00000410513 MAPK8IP2Q13387 824 aaPredicted RBP15.07■□□□□ 0
RN7SKP56-201ENST00000410513 SCAF1Q9H7N4 1312 aaKnown RBP15□□□□□ -0.01
RN7SKP56-201ENST00000410513 DMRT2Q9Y5R5 561 aa14.82□□□□□ -0.04
RN7SKP56-201ENST00000410513 KCNA4P22459 653 aa14.77□□□□□ -0.05
RN7SKP56-201ENST00000410513 CNKSR2Q8WXI2 1034 aa14.74□□□□□ -0.05
RN7SKP56-201ENST00000410513 NCBP3Q53F19 620 aaKnown RBP14.67□□□□□ -0.06
RN7SKP56-201ENST00000410513 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
RN7SKP56-201ENST00000410513 RNF216Q9NWF9 866 aaPredicted RBP14.48□□□□□ -0.09
RN7SKP56-201ENST00000410513 HOXD11P31277 338 aaPredicted RBP14.47□□□□□ -0.09
RN7SKP56-201ENST00000410513 DCAF8L1A6NGE4 600 aa14.15□□□□□ -0.14
RN7SKP56-201ENST00000410513 DNAJC5BQ9UF47 199 aa14.11□□□□□ -0.15
RN7SKP56-201ENST00000410513 SLC4A1APQ9BWU0 796 aaKnown RBP13.99□□□□□ -0.17
RN7SKP56-201ENST00000410513 SLC4A2P04920 1241 aa13.81□□□□□ -0.2
RN7SKP56-201ENST00000410513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.76□□□□□ -0.21
RN7SKP56-201ENST00000410513 RNF39Q9H2S5 420 aa13.66□□□□□ -0.22
RN7SKP56-201ENST00000410513 ZBTB22O15209 634 aa13.64□□□□□ -0.23
RN7SKP56-201ENST00000410513 U3KPZ7 1027 aaPredicted RBP13.6□□□□□ -0.23
RN7SKP56-201ENST00000410513 FOXD4L1Q9NU39 408 aa13.57□□□□□ -0.24
RN7SKP56-201ENST00000410513 EHMT2Q96KQ7 1210 aa13.53□□□□□ -0.24
RN7SKP56-201ENST00000410513 C1QBPQ07021 282 aaKnown RBP13.45□□□□□ -0.26
RN7SKP56-201ENST00000410513 CSRNP3Q8WYN3 585 aa13.44□□□□□ -0.26
RN7SKP56-201ENST00000410513 MYCNP04198 464 aaPredicted RBP13.4□□□□□ -0.26
RN7SKP56-201ENST00000410513 CACNB1Q02641 598 aaPredicted RBP13.33□□□□□ -0.28
RN7SKP56-201ENST00000410513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.26□□□□□ -0.29
RN7SKP56-201ENST00000410513 HNRNPUL2Q1KMD3 747 aaKnown RBP13.26□□□□□ -0.29
RN7SKP56-201ENST00000410513 SPINK5Q9NQ38 1064 aaPredicted RBP13.25□□□□□ -0.29
RN7SKP56-201ENST00000410513 SAMD1Q6SPF0 538 aaPredicted RBP13.24□□□□□ -0.29
RN7SKP56-201ENST00000410513 ATF5Q9Y2D1 282 aaPredicted RBP13.16□□□□□ -0.3
RN7SKP56-201ENST00000410513 CAPN15O75808 1086 aa13.13□□□□□ -0.31
RN7SKP56-201ENST00000410513 APLP2Q06481 763 aa13.11□□□□□ -0.31
RN7SKP56-201ENST00000410513 ATXN8OSP0DMR3 200 aa13.06□□□□□ -0.32
RN7SKP56-201ENST00000410513 TRHP20396 242 aaPredicted RBP13.06□□□□□ -0.32
RN7SKP56-201ENST00000410513 ZNF219Q9P2Y4 722 aaPredicted RBP13.01□□□□□ -0.33
RN7SKP56-201ENST00000410513 DSG3P32926 999 aa12.98□□□□□ -0.33
RN7SKP56-201ENST00000410513 ABCB7O75027 752 aa12.92□□□□□ -0.34
RN7SKP56-201ENST00000410513 POLA2Q14181 598 aa12.83□□□□□ -0.36
RN7SKP56-201ENST00000410513 MKRN4PQ13434 485 aaPredicted RBP12.57□□□□□ -0.4
RN7SKP56-201ENST00000410513 ZBTB12Q9Y330 459 aaPredicted RBP12.54□□□□□ -0.4
RN7SKP56-201ENST00000410513 FBLN2P98095 1184 aa12.47□□□□□ -0.41
RN7SKP56-201ENST00000410513 OSCARQ8IYS5 282 aa12.44□□□□□ -0.42
RN7SKP56-201ENST00000410513 RBM42Q9BTD8 480 aaKnown RBP12.28□□□□□ -0.44
RN7SKP56-201ENST00000410513 SPDYE2BA6NHP3 402 aa12.24□□□□□ -0.45
RN7SKP56-201ENST00000410513 SPDYE6P0CI01 402 aa12.24□□□□□ -0.45
RN7SKP56-201ENST00000410513 SPDYE2Q495Y8 402 aa12.24□□□□□ -0.45
RN7SKP56-201ENST00000410513 ZNF692Q9BU19 519 aaPredicted RBP12.18□□□□□ -0.46
RN7SKP56-201ENST00000410513 SSUH2Q9Y2M2 353 aa12.18□□□□□ -0.46
RN7SKP56-201ENST00000410513 SPDYE4A6NLX3 237 aa12.17□□□□□ -0.46
RN7SKP56-201ENST00000410513 AKT1S1Q96B36 256 aa12.15□□□□□ -0.46
RN7SKP56-201ENST00000410513 FKBP8Q14318 412 aa12.12□□□□□ -0.47
RN7SKP56-201ENST00000410513 REM2Q8IYK8 340 aaPredicted RBP12.07□□□□□ -0.48
RN7SKP56-201ENST00000410513 PABPN1Q86U42 306 aaKnown RBP eCLIP12.05□□□□□ -0.48
RN7SKP56-201ENST00000410513 POTEHQ6S545 545 aa12.03□□□□□ -0.48
RN7SKP56-201ENST00000410513 PROM2Q8N271 834 aa12□□□□□ -0.49
RN7SKP56-201ENST00000410513 PITPNM1O00562 1244 aa11.95□□□□□ -0.5
RN7SKP56-201ENST00000410513 SPDYE1Q8NFV5 336 aaPredicted RBP11.89□□□□□ -0.51
RN7SKP56-201ENST00000410513 CHRDL2Q6WN34 429 aa11.87□□□□□ -0.51
RN7SKP56-201ENST00000410513 CLEC11AQ9Y240 323 aa11.85□□□□□ -0.51
RN7SKP56-201ENST00000410513 STAG3Q9UJ98 1225 aa11.75□□□□□ -0.53
RN7SKP56-201ENST00000410513 FXR2P51116 673 aaKnown RBP eCLIP11.73□□□□□ -0.53
RN7SKP56-201ENST00000410513 PRR29P0C7W0 189 aa11.72□□□□□ -0.53
RN7SKP56-201ENST00000410513 PIP4P2Q8N4L2 257 aa11.72□□□□□ -0.53
RN7SKP56-201ENST00000410513 CHADLQ6NUI6 762 aa11.64□□□□□ -0.55
RN7SKP56-201ENST00000410513 CREBZFQ9NS37 354 aa11.63□□□□□ -0.55
RN7SKP56-201ENST00000410513 PRKAR2AP13861 404 aaKnown RBP11.62□□□□□ -0.55
RN7SKP56-201ENST00000410513 FBXO3Q9UK99 471 aa11.62□□□□□ -0.55
RN7SKP56-201ENST00000410513 VASPP50552 380 aaPredicted RBP11.55□□□□□ -0.56
RN7SKP56-201ENST00000410513 MIER1Q8N108 512 aa11.52□□□□□ -0.57
RN7SKP56-201ENST00000410513 MNX1P50219 401 aaPredicted RBP11.51□□□□□ -0.57
RN7SKP56-201ENST00000410513 PLCD3Q8N3E9 789 aa11.48□□□□□ -0.57
RN7SKP56-201ENST00000410513 FARP1Q9Y4F1 1045 aaPredicted RBP11.48□□□□□ -0.57
RN7SKP56-201ENST00000410513 IFNLR1Q8IU57 520 aaPredicted RBP11.42□□□□□ -0.58
RN7SKP56-201ENST00000410513 PLEKHG5O94827 1062 aa11.39□□□□□ -0.59
RN7SKP56-201ENST00000410513 C19orf67A6NJJ6 358 aa11.33□□□□□ -0.6
RN7SKP56-201ENST00000410513 NPM1P06748 294 aaKnown RBP eCLIP11.33□□□□□ -0.6
RN7SKP56-201ENST00000410513 EVX2Q03828 476 aa11.33□□□□□ -0.6
RN7SKP56-201ENST00000410513 HAX1O00165 279 aa11.32□□□□□ -0.6
RN7SKP56-201ENST00000410513 KLHL34Q8N239 644 aa11.32□□□□□ -0.6
RN7SKP56-201ENST00000410513 ZBTB47Q9UFB7 747 aaPredicted RBP11.31□□□□□ -0.6
RN7SKP56-201ENST00000410513 NUBP1P53384 320 aa11.3□□□□□ -0.6
RN7SKP56-201ENST00000410513 CD44P16070 742 aaKnown RBP11.28□□□□□ -0.6
RN7SKP56-201ENST00000410513 RASEFQ8IZ41 740 aa11.28□□□□□ -0.6
RN7SKP56-201ENST00000410513 SPOCK2Q92563 424 aa11.24□□□□□ -0.61
RN7SKP56-201ENST00000410513 TSPYL2Q9H2G4 693 aaPredicted RBP11.21□□□□□ -0.61
RN7SKP56-201ENST00000410513 ZRANB1Q9UGI0 708 aa11.2□□□□□ -0.62
RN7SKP56-201ENST00000410513 CCDC61Q9Y6R9 512 aa11.15□□□□□ -0.62
RN7SKP56-201ENST00000410513 PAK3O75914 559 aaPredicted RBP11.14□□□□□ -0.63
RN7SKP56-201ENST00000410513 ZNF579Q8NAF0 562 aaKnown RBP11.14□□□□□ -0.63
RN7SKP56-201ENST00000410513 FAM212AQ96EL1 285 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms