RNA–Protein interactions for RNA: ENST00000396218.5

RUNX1T1-203, Transcript of RUNX1 translocation partner 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RUNX1T1, Length 3,463 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-203ENST00000396218 NISCHQ9Y2I1 1504 aa16.85■□□□□ 0.29
RUNX1T1-203ENST00000396218 SHROOM4Q9ULL8 1493 aa14.73□□□□□ -0.05
RUNX1T1-203ENST00000396218 DCAF8L2P0C7V8 631 aa14.65□□□□□ -0.06
RUNX1T1-203ENST00000396218 SUPT5HO00267 1087 aaKnown RBP14.62□□□□□ -0.07
RUNX1T1-203ENST00000396218 ZCCHC6Q5VYS8 1495 aaKnown RBP14.31□□□□□ -0.12
RUNX1T1-203ENST00000396218 MYO15BQ96JP2 1530 aa14.3□□□□□ -0.12
RUNX1T1-203ENST00000396218 HRCP23327 699 aa14.29□□□□□ -0.12
RUNX1T1-203ENST00000396218 CHIC1Q5VXU3 224 aa14.24□□□□□ -0.13
RUNX1T1-203ENST00000396218 PCGF6Q9BYE7 350 aa14.14□□□□□ -0.15
RUNX1T1-203ENST00000396218 CCDC180Q9P1Z9 1646 aa14.13□□□□□ -0.15
RUNX1T1-203ENST00000396218 PPARGC1BQ86YN6 1023 aaKnown RBP14.04□□□□□ -0.16
RUNX1T1-203ENST00000396218 EHMT2Q96KQ7 1210 aa13.91□□□□□ -0.18
RUNX1T1-203ENST00000396218 DCAF1Q9Y4B6 1507 aa13.9□□□□□ -0.18
RUNX1T1-203ENST00000396218 LOC105371045A0A1W2PR82 267 aa13.89□□□□□ -0.19
RUNX1T1-203ENST00000396218 ABCC9O60706 1549 aa13.82□□□□□ -0.2
RUNX1T1-203ENST00000396218 TRIM26Q12899 539 aaPredicted RBP13.73□□□□□ -0.21
RUNX1T1-203ENST00000396218 FAM9AQ8IZU1 332 aaPredicted RBP13.69□□□□□ -0.22
RUNX1T1-203ENST00000396218 ZEB1P37275 1124 aaPredicted RBP13.51□□□□□ -0.25
RUNX1T1-203ENST00000396218 TRIM41Q8WV44 630 aa13.48□□□□□ -0.25
RUNX1T1-203ENST00000396218 RSF1Q96T23 1441 aaPredicted RBP13.48□□□□□ -0.25
RUNX1T1-203ENST00000396218 TTBK1Q5TCY1 1321 aaPredicted RBP13.42□□□□□ -0.26
RUNX1T1-203ENST00000396218 SCRIBQ14160 1630 aa13.42□□□□□ -0.26
RUNX1T1-203ENST00000396218 RB1CC1Q8TDY2 1594 aa13.41□□□□□ -0.26
RUNX1T1-203ENST00000396218 SCAF1Q9H7N4 1312 aaKnown RBP13.39□□□□□ -0.27
RUNX1T1-203ENST00000396218 PELP1Q8IZL8 1130 aaKnown RBP13.35□□□□□ -0.27
RUNX1T1-203ENST00000396218 PABPN1Q86U42 306 aaKnown RBP eCLIP13.23□□□□□ -0.29
RUNX1T1-203ENST00000396218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.2□□□□□ -0.3
RUNX1T1-203ENST00000396218 CECR2Q9BXF3 1484 aa13.19□□□□□ -0.3
RUNX1T1-203ENST00000396218 MROH2BQ7Z745 1585 aa13.16□□□□□ -0.3
RUNX1T1-203ENST00000396218 CCER1Q8TC90 406 aaPredicted RBP13.15□□□□□ -0.3
RUNX1T1-203ENST00000396218 ACIN1Q9UKV3 1341 aaKnown RBP13.13□□□□□ -0.31
RUNX1T1-203ENST00000396218 NEUROD1Q13562 356 aa13.12□□□□□ -0.31
RUNX1T1-203ENST00000396218 WIZO95785 1651 aa13.12□□□□□ -0.31
RUNX1T1-203ENST00000396218 RANGAP1P46060 587 aaPredicted RBP13.07□□□□□ -0.32
RUNX1T1-203ENST00000396218 DIEXFQ68CQ4 756 aaKnown RBP13.04□□□□□ -0.32
RUNX1T1-203ENST00000396218 EIF4G1Q04637 1599 aaKnown RBP13.02□□□□□ -0.32
RUNX1T1-203ENST00000396218 GTF3C3Q9Y5Q9 886 aa13.01□□□□□ -0.33
RUNX1T1-203ENST00000396218 NACADO15069 1562 aa13.01□□□□□ -0.33
RUNX1T1-203ENST00000396218 BAZ1AQ9NRL2 1556 aaPredicted RBP13□□□□□ -0.33
RUNX1T1-203ENST00000396218 CENPBP07199 599 aaPredicted RBP12.98□□□□□ -0.33
RUNX1T1-203ENST00000396218 ABCC8Q09428 1581 aa12.95□□□□□ -0.34
RUNX1T1-203ENST00000396218 WRNQ14191 1432 aaPredicted RBP eCLIP12.95□□□□□ -0.34
RUNX1T1-203ENST00000396218 UBTFP17480 764 aaKnown RBP12.94□□□□□ -0.34
RUNX1T1-203ENST00000396218 CCDC88BA6NC98 1476 aa12.94□□□□□ -0.34
RUNX1T1-203ENST00000396218 CEP162Q5TB80 1403 aa12.93□□□□□ -0.34
RUNX1T1-203ENST00000396218 YTHDC1Q96MU7 727 aaKnown RBP12.89□□□□□ -0.35
RUNX1T1-203ENST00000396218 SOGA1O94964 1423 aa12.88□□□□□ -0.35
RUNX1T1-203ENST00000396218 TNIKQ9UKE5 1360 aa12.85□□□□□ -0.35
RUNX1T1-203ENST00000396218 TOP2AP11388 1531 aaKnown RBP12.85□□□□□ -0.35
RUNX1T1-203ENST00000396218 ZNF316A6NFI3 1004 aaPredicted RBP12.85□□□□□ -0.35
RUNX1T1-203ENST00000396218 SMARCA2P51531 1590 aa12.82□□□□□ -0.36
RUNX1T1-203ENST00000396218 RUSC2Q8N2Y8 1516 aa12.82□□□□□ -0.36
RUNX1T1-203ENST00000396218 APLP2Q06481 763 aa12.79□□□□□ -0.36
RUNX1T1-203ENST00000396218 CSRNP3Q8WYN3 585 aa12.79□□□□□ -0.36
RUNX1T1-203ENST00000396218 HNRNPUL2Q1KMD3 747 aaKnown RBP12.78□□□□□ -0.36
RUNX1T1-203ENST00000396218 SMARCA4P51532 1647 aa12.78□□□□□ -0.36
RUNX1T1-203ENST00000396218 EEA1Q15075 1411 aa12.76□□□□□ -0.37
RUNX1T1-203ENST00000396218 MIER1Q8N108 512 aa12.75□□□□□ -0.37
RUNX1T1-203ENST00000396218 GOLGA3Q08378 1498 aa12.74□□□□□ -0.37
RUNX1T1-203ENST00000396218 MYT1Q01538 1121 aa12.72□□□□□ -0.37
RUNX1T1-203ENST00000396218 DNAJC5BQ9UF47 199 aa12.67□□□□□ -0.38
RUNX1T1-203ENST00000396218 UNC13AQ9UPW8 1703 aa12.63□□□□□ -0.39
RUNX1T1-203ENST00000396218 CEP164Q9UPV0 1460 aa12.63□□□□□ -0.39
RUNX1T1-203ENST00000396218 CLIP1P30622 1438 aa12.63□□□□□ -0.39
RUNX1T1-203ENST00000396218 KIF21BO75037 1637 aa12.6□□□□□ -0.39
RUNX1T1-203ENST00000396218 SYNJ1O43426 1573 aa12.6□□□□□ -0.39
RUNX1T1-203ENST00000396218 VPS8Q8N3P4 1428 aa12.59□□□□□ -0.39
RUNX1T1-203ENST00000396218 ITGAEP38570 1179 aa12.59□□□□□ -0.39
RUNX1T1-203ENST00000396218 ATP1B4Q9UN42 357 aaPredicted RBP12.54□□□□□ -0.4
RUNX1T1-203ENST00000396218 RAPGEF2Q9Y4G8 1499 aa12.54□□□□□ -0.4
RUNX1T1-203ENST00000396218 BICRAQ9NZM4 1560 aa12.53□□□□□ -0.4
RUNX1T1-203ENST00000396218 BAZ1BQ9UIG0 1483 aaKnown RBP12.51□□□□□ -0.41
RUNX1T1-203ENST00000396218 DHX57Q6P158 1386 aaKnown RBP12.48□□□□□ -0.41
RUNX1T1-203ENST00000396218 PEG3Q9GZU2 1588 aa12.47□□□□□ -0.41
RUNX1T1-203ENST00000396218 SUPT16HQ9Y5B9 1047 aaKnown RBP12.45□□□□□ -0.42
RUNX1T1-203ENST00000396218 CLSPNQ9HAW4 1339 aa12.44□□□□□ -0.42
RUNX1T1-203ENST00000396218 KANK4Q5T7N3 995 aaPredicted RBP12.41□□□□□ -0.42
RUNX1T1-203ENST00000396218 ARAP1Q96P48 1450 aa12.39□□□□□ -0.43
RUNX1T1-203ENST00000396218 ATAD2BQ9ULI0 1458 aa12.39□□□□□ -0.43
RUNX1T1-203ENST00000396218 TOP2BQ02880 1626 aa12.37□□□□□ -0.43
RUNX1T1-203ENST00000396218 ERICH3Q5RHP9 1530 aa12.33□□□□□ -0.43
RUNX1T1-203ENST00000396218 PRXQ9BXM0 1461 aa12.33□□□□□ -0.43
RUNX1T1-203ENST00000396218 RRBP1Q9P2E9 1410 aaKnown RBP12.33□□□□□ -0.44
RUNX1T1-203ENST00000396218 TSHZ2Q9NRE2 1034 aa12.33□□□□□ -0.44
RUNX1T1-203ENST00000396218 KCNH8Q96L42 1107 aa12.32□□□□□ -0.44
RUNX1T1-203ENST00000396218 BIVM-ERCC5R4GMW8 1640 aa12.31□□□□□ -0.44
RUNX1T1-203ENST00000396218 CUX2O14529 1486 aa12.29□□□□□ -0.44
RUNX1T1-203ENST00000396218 CCNB3Q8WWL7 1395 aa12.28□□□□□ -0.44
RUNX1T1-203ENST00000396218 BCANQ96GW7 911 aa12.25□□□□□ -0.45
RUNX1T1-203ENST00000396218 RAB3GAP2Q9H2M9 1393 aa12.23□□□□□ -0.45
RUNX1T1-203ENST00000396218 ARHGAP35Q9NRY4 1499 aa12.23□□□□□ -0.45
RUNX1T1-203ENST00000396218 P3H3Q8IVL6 736 aa12.23□□□□□ -0.45
RUNX1T1-203ENST00000396218 MAPKBP1O60336 1514 aa12.23□□□□□ -0.45
RUNX1T1-203ENST00000396218 CUX1P39880 1505 aa12.22□□□□□ -0.45
RUNX1T1-203ENST00000396218 FAM50AQ14320 339 aaKnown RBP12.22□□□□□ -0.45
RUNX1T1-203ENST00000396218 ANP32EQ9BTT0 268 aa12.21□□□□□ -0.45
RUNX1T1-203ENST00000396218 KIF27Q86VH2 1401 aa12.21□□□□□ -0.45
RUNX1T1-203ENST00000396218 CC2D2AQ9P2K1 1620 aa12.2□□□□□ -0.46
RUNX1T1-203ENST00000396218 DDX10Q13206 875 aaKnown RBP12.19□□□□□ -0.46
RUNX1T1-203ENST00000396218 CNGB1Q14028 1251 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms