RNA–Protein interactions for RNA: ENST00000282641.6

A1CF-201, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene A1CF, Length 9,350 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-201ENST00000282641 MYT1Q01538 1121 aa15.48■□□□□ 0.07
A1CF-201ENST00000282641 PELP1Q8IZL8 1130 aaKnown RBP15.28■□□□□ 0.04
A1CF-201ENST00000282641 TTBK1Q5TCY1 1321 aaPredicted RBP14.69□□□□□ -0.06
A1CF-201ENST00000282641 NISCHQ9Y2I1 1504 aa14.11□□□□□ -0.15
A1CF-201ENST00000282641 ZEB1P37275 1124 aaPredicted RBP13.94□□□□□ -0.18
A1CF-201ENST00000282641 CENPBP07199 599 aaPredicted RBP13.64□□□□□ -0.23
A1CF-201ENST00000282641 ERICH6Q7L0X2 663 aa13.58□□□□□ -0.24
A1CF-201ENST00000282641 CLSPNQ9HAW4 1339 aa13.56□□□□□ -0.24
A1CF-201ENST00000282641 CCER1Q8TC90 406 aaPredicted RBP13.39□□□□□ -0.27
A1CF-201ENST00000282641 HRCP23327 699 aa13.36□□□□□ -0.27
A1CF-201ENST00000282641 MYT1LQ9UL68 1186 aa13.35□□□□□ -0.27
A1CF-201ENST00000282641 YTHDC1Q96MU7 727 aaKnown RBP13.3□□□□□ -0.28
A1CF-201ENST00000282641 DCAF1Q9Y4B6 1507 aa13.03□□□□□ -0.32
A1CF-201ENST00000282641 CCDC180Q9P1Z9 1646 aa12.95□□□□□ -0.34
A1CF-201ENST00000282641 TRIM26Q12899 539 aaPredicted RBP12.88□□□□□ -0.35
A1CF-201ENST00000282641 NEFLP07196 543 aa12.74□□□□□ -0.37
A1CF-201ENST00000282641 PCGF6Q9BYE7 350 aa12.7□□□□□ -0.38
A1CF-201ENST00000282641 GLIPR1L2Q4G1C9 344 aa12.67□□□□□ -0.38
A1CF-201ENST00000282641 FAM9AQ8IZU1 332 aaPredicted RBP12.61□□□□□ -0.39
A1CF-201ENST00000282641 ACIN1Q9UKV3 1341 aaKnown RBP12.58□□□□□ -0.4
A1CF-201ENST00000282641 SHROOM4Q9ULL8 1493 aa12.52□□□□□ -0.41
A1CF-201ENST00000282641 ERICH6BQ5W0A0 696 aa12.48□□□□□ -0.41
A1CF-201ENST00000282641 RTL5Q5HYW3 569 aaPredicted RBP12.46□□□□□ -0.42
A1CF-201ENST00000282641 SUPT5HO00267 1087 aaKnown RBP12.39□□□□□ -0.43
A1CF-201ENST00000282641 APLP2Q06481 763 aa12.38□□□□□ -0.43
A1CF-201ENST00000282641 DIEXFQ68CQ4 756 aaKnown RBP12.31□□□□□ -0.44
A1CF-201ENST00000282641 ANP32EQ9BTT0 268 aa12.3□□□□□ -0.44
A1CF-201ENST00000282641 ARID4BQ4LE39 1312 aaPredicted RBP12.27□□□□□ -0.45
A1CF-201ENST00000282641 EHMT2Q96KQ7 1210 aa12.24□□□□□ -0.45
A1CF-201ENST00000282641 RANGAP1P46060 587 aaPredicted RBP12.24□□□□□ -0.45
A1CF-201ENST00000282641 CHIC1Q5VXU3 224 aa12.22□□□□□ -0.45
A1CF-201ENST00000282641 GTF3C3Q9Y5Q9 886 aa12.22□□□□□ -0.45
A1CF-201ENST00000282641 NCLP19338 710 aaKnown RBP12.14□□□□□ -0.47
A1CF-201ENST00000282641 DAXXQ9UER7 740 aaPredicted RBP12.13□□□□□ -0.47
A1CF-201ENST00000282641 SCAF1Q9H7N4 1312 aaKnown RBP12.11□□□□□ -0.47
A1CF-201ENST00000282641 EEA1Q15075 1411 aa12.1□□□□□ -0.47
A1CF-201ENST00000282641 ZNF316A6NFI3 1004 aaPredicted RBP12.1□□□□□ -0.47
A1CF-201ENST00000282641 BCL11AQ9H165 835 aa12.09□□□□□ -0.47
A1CF-201ENST00000282641 SLC24A1O60721 1099 aa12.09□□□□□ -0.47
A1CF-201ENST00000282641 CDK11AQ9UQ88 783 aaPredicted RBP12.07□□□□□ -0.48
A1CF-201ENST00000282641 ZCCHC6Q5VYS8 1495 aaKnown RBP12.07□□□□□ -0.48
A1CF-201ENST00000282641 TRIM41Q8WV44 630 aa12.04□□□□□ -0.48
A1CF-201ENST00000282641 ANP32AP39687 249 aaKnown RBP12.02□□□□□ -0.49
A1CF-201ENST00000282641 NEUROD1Q13562 356 aa11.95□□□□□ -0.5
A1CF-201ENST00000282641 USP35Q9P2H5 1018 aa11.92□□□□□ -0.5
A1CF-201ENST00000282641 ZNF326Q5BKZ1 582 aaKnown RBP11.91□□□□□ -0.5
A1CF-201ENST00000282641 EIF5BO60841 1220 aaKnown RBP11.86□□□□□ -0.51
A1CF-201ENST00000282641 PPM1GO15355 546 aaPredicted RBP11.85□□□□□ -0.51
A1CF-201ENST00000282641 RSPH6AQ9H0K4 717 aa11.84□□□□□ -0.51
A1CF-201ENST00000282641 TRIM44Q96DX7 344 aaPredicted RBP11.84□□□□□ -0.51
A1CF-201ENST00000282641 TIMELESSQ9UNS1 1208 aa11.82□□□□□ -0.52
A1CF-201ENST00000282641 TNNT2P45379 298 aaPredicted RBP11.81□□□□□ -0.52
A1CF-201ENST00000282641 DDRGK1Q96HY6 314 aa11.81□□□□□ -0.52
A1CF-201ENST00000282641 PPARGC1BQ86YN6 1023 aaKnown RBP11.79□□□□□ -0.52
A1CF-201ENST00000282641 FANCIQ9NVI1 1328 aa11.79□□□□□ -0.52
A1CF-201ENST00000282641 WRNQ14191 1432 aaPredicted RBP eCLIP11.76□□□□□ -0.53
A1CF-201ENST00000282641 ANP32BQ92688 251 aaKnown RBP11.75□□□□□ -0.53
A1CF-201ENST00000282641 MYO15BQ96JP2 1530 aa11.73□□□□□ -0.53
A1CF-201ENST00000282641 ANP32CO43423 234 aa11.73□□□□□ -0.53
A1CF-201ENST00000282641 ABCC9O60706 1549 aa11.7□□□□□ -0.54
A1CF-201ENST00000282641 PTMSP20962 102 aa11.67□□□□□ -0.54
A1CF-201ENST00000282641 LAS1LQ9Y4W2 734 aaKnown RBP11.67□□□□□ -0.54
A1CF-201ENST00000282641 GOLGA3Q08378 1498 aa11.67□□□□□ -0.54
A1CF-201ENST00000282641 CCER2I3L3R5 266 aa11.66□□□□□ -0.54
A1CF-201ENST00000282641 L1TD1Q5T7N2 865 aaKnown RBP11.65□□□□□ -0.54
A1CF-201ENST00000282641 RB1CC1Q8TDY2 1594 aa11.64□□□□□ -0.55
A1CF-201ENST00000282641 MTERF4Q7Z6M4 381 aaKnown RBP11.64□□□□□ -0.55
A1CF-201ENST00000282641 PRKCSHP14314 528 aaPredicted RBP11.62□□□□□ -0.55
A1CF-201ENST00000282641 ZBTB47Q9UFB7 747 aaPredicted RBP11.61□□□□□ -0.55
A1CF-201ENST00000282641 NOP58Q9Y2X3 529 aaKnown RBP11.59□□□□□ -0.55
A1CF-201ENST00000282641 MAP7D2Q96T17 732 aa11.58□□□□□ -0.56
A1CF-201ENST00000282641 DCAF8L2P0C7V8 631 aa11.58□□□□□ -0.56
A1CF-201ENST00000282641 NEFMP07197 916 aa11.55□□□□□ -0.56
A1CF-201ENST00000282641 SUPT16HQ9Y5B9 1047 aaKnown RBP11.55□□□□□ -0.56
A1CF-201ENST00000282641 ISY1Q9ULR0 285 aaKnown RBP11.55□□□□□ -0.56
A1CF-201ENST00000282641 UBE2Q2Q8WVN8 375 aa11.55□□□□□ -0.56
A1CF-201ENST00000282641 TNIKQ9UKE5 1360 aa11.55□□□□□ -0.56
A1CF-201ENST00000282641 BECN1Q14457 450 aa11.54□□□□□ -0.56
A1CF-201ENST00000282641 UPF2Q9HAU5 1272 aaKnown RBP11.53□□□□□ -0.56
A1CF-201ENST00000282641 PPP4R2Q9NY27 417 aa11.52□□□□□ -0.56
A1CF-201ENST00000282641 TAF3Q5VWG9 929 aa11.51□□□□□ -0.57
A1CF-201ENST00000282641 UBTFP17480 764 aaKnown RBP11.5□□□□□ -0.57
A1CF-201ENST00000282641 BAZ1AQ9NRL2 1556 aaPredicted RBP11.5□□□□□ -0.57
A1CF-201ENST00000282641 CEP164Q9UPV0 1460 aa11.5□□□□□ -0.57
A1CF-201ENST00000282641 BAZ1BQ9UIG0 1483 aaKnown RBP11.49□□□□□ -0.57
A1CF-201ENST00000282641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.48□□□□□ -0.57
A1CF-201ENST00000282641 DEKP35659 375 aaKnown RBP11.45□□□□□ -0.58
A1CF-201ENST00000282641 POLR3GLQ9BT43 218 aa11.44□□□□□ -0.58
A1CF-201ENST00000282641 RRP9O43818 475 aaKnown RBP11.41□□□□□ -0.58
A1CF-201ENST00000282641 CFAP44Q96MT7 982 aa11.41□□□□□ -0.58
A1CF-201ENST00000282641 CCDC136Q96JN2 1154 aa11.41□□□□□ -0.58
A1CF-201ENST00000282641 FKBP8Q14318 412 aa11.41□□□□□ -0.58
A1CF-201ENST00000282641 HMGB1P09429 215 aaKnown RBP11.4□□□□□ -0.58
A1CF-201ENST00000282641 CEP162Q5TB80 1403 aa11.4□□□□□ -0.58
A1CF-201ENST00000282641 HSP90AA1P07900 732 aaKnown RBP11.4□□□□□ -0.58
A1CF-201ENST00000282641 CDK11BP21127 795 aaKnown RBP11.39□□□□□ -0.59
A1CF-201ENST00000282641 TSHZ2Q9NRE2 1034 aa11.39□□□□□ -0.59
A1CF-201ENST00000282641 CSRNP3Q8WYN3 585 aa11.39□□□□□ -0.59
A1CF-201ENST00000282641 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.39□□□□□ -0.59
A1CF-201ENST00000282641 RBM19Q9Y4C8 960 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms