RNA–Protein interactions for RNA: ENST00000544717.5

LINC02443-204, Transcript of long intergenic non-protein coding RNA 2443, humanhuman

TSL 5 BASIC

Gene LINC02443, Length 754 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02443-204ENST00000544717 AEBP2Q6ZN18 517 aaPredicted RBP20.98■□□□□ 0.95
LINC02443-204ENST00000544717 CHIC1Q5VXU3 224 aa20.62■□□□□ 0.89
LINC02443-204ENST00000544717 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
LINC02443-204ENST00000544717 SENP3Q9H4L4 574 aaPredicted RBP18.05■□□□□ 0.48
LINC02443-204ENST00000544717 PLPPR3Q6T4P5 718 aa16.86■□□□□ 0.29
LINC02443-204ENST00000544717 FOXD1Q16676 465 aa16.74■□□□□ 0.27
LINC02443-204ENST00000544717 ADRA2BP18089 450 aa15.97■□□□□ 0.15
LINC02443-204ENST00000544717 PPP6R1Q9UPN7 881 aa15.95■□□□□ 0.14
LINC02443-204ENST00000544717 MSH5O43196 834 aa15.83■□□□□ 0.12
LINC02443-204ENST00000544717 PIAS4Q8N2W9 510 aaPredicted RBP15.64■□□□□ 0.09
LINC02443-204ENST00000544717 POTEDQ86YR6 584 aa15.54■□□□□ 0.08
LINC02443-204ENST00000544717 PPP4R3CPQ6ZMV5 832 aa14.87□□□□□ -0.03
LINC02443-204ENST00000544717 KCNA4P22459 653 aa14.75□□□□□ -0.05
LINC02443-204ENST00000544717 SCAF1Q9H7N4 1312 aaKnown RBP14.65□□□□□ -0.06
LINC02443-204ENST00000544717 NCBP3Q53F19 620 aaKnown RBP14.57□□□□□ -0.08
LINC02443-204ENST00000544717 MAPK8IP2Q13387 824 aaPredicted RBP14.43□□□□□ -0.1
LINC02443-204ENST00000544717 CNKSR2Q8WXI2 1034 aa14.41□□□□□ -0.1
LINC02443-204ENST00000544717 NPM3O75607 178 aaKnown RBP14.32□□□□□ -0.12
LINC02443-204ENST00000544717 DMRT2Q9Y5R5 561 aa14.27□□□□□ -0.13
LINC02443-204ENST00000544717 SLC4A1APQ9BWU0 796 aaKnown RBP14.11□□□□□ -0.15
LINC02443-204ENST00000544717 RNF216Q9NWF9 866 aaPredicted RBP14.07□□□□□ -0.16
LINC02443-204ENST00000544717 EHMT2Q96KQ7 1210 aa13.96□□□□□ -0.17
LINC02443-204ENST00000544717 HOXD11P31277 338 aaPredicted RBP13.94□□□□□ -0.18
LINC02443-204ENST00000544717 DNAJC5BQ9UF47 199 aa13.8□□□□□ -0.2
LINC02443-204ENST00000544717 DCAF8L1A6NGE4 600 aa13.65□□□□□ -0.22
LINC02443-204ENST00000544717 CSRNP3Q8WYN3 585 aa13.65□□□□□ -0.22
LINC02443-204ENST00000544717 CACNB1Q02641 598 aaPredicted RBP13.57□□□□□ -0.24
LINC02443-204ENST00000544717 ZBTB22O15209 634 aa13.55□□□□□ -0.24
LINC02443-204ENST00000544717 FOXD4L1Q9NU39 408 aa13.53□□□□□ -0.24
LINC02443-204ENST00000544717 SLC4A2P04920 1241 aa13.45□□□□□ -0.26
LINC02443-204ENST00000544717 RNF39Q9H2S5 420 aa13.44□□□□□ -0.26
LINC02443-204ENST00000544717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.36□□□□□ -0.27
LINC02443-204ENST00000544717 C1QBPQ07021 282 aaKnown RBP13.3□□□□□ -0.28
LINC02443-204ENST00000544717 MYCNP04198 464 aaPredicted RBP13.25□□□□□ -0.29
LINC02443-204ENST00000544717 U3KPZ7 1027 aaPredicted RBP13.11□□□□□ -0.31
LINC02443-204ENST00000544717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.06□□□□□ -0.32
LINC02443-204ENST00000544717 HNRNPUL2Q1KMD3 747 aaKnown RBP13.06□□□□□ -0.32
LINC02443-204ENST00000544717 ATXN8OSP0DMR3 200 aa13.02□□□□□ -0.33
LINC02443-204ENST00000544717 SAMD1Q6SPF0 538 aaPredicted RBP13.01□□□□□ -0.33
LINC02443-204ENST00000544717 APLP2Q06481 763 aa12.88□□□□□ -0.35
LINC02443-204ENST00000544717 ATF5Q9Y2D1 282 aaPredicted RBP12.86□□□□□ -0.35
LINC02443-204ENST00000544717 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.37
LINC02443-204ENST00000544717 CAPN15O75808 1086 aa12.69□□□□□ -0.38
LINC02443-204ENST00000544717 TRHP20396 242 aaPredicted RBP12.68□□□□□ -0.38
LINC02443-204ENST00000544717 ZNF219Q9P2Y4 722 aaPredicted RBP12.66□□□□□ -0.38
LINC02443-204ENST00000544717 DSG3P32926 999 aa12.53□□□□□ -0.4
LINC02443-204ENST00000544717 POLA2Q14181 598 aa12.49□□□□□ -0.41
LINC02443-204ENST00000544717 ABCB7O75027 752 aa12.46□□□□□ -0.41
LINC02443-204ENST00000544717 FKBP8Q14318 412 aa12.38□□□□□ -0.43
LINC02443-204ENST00000544717 FBLN2P98095 1184 aa12.36□□□□□ -0.43
LINC02443-204ENST00000544717 ZBTB12Q9Y330 459 aaPredicted RBP12.3□□□□□ -0.44
LINC02443-204ENST00000544717 MKRN4PQ13434 485 aaPredicted RBP12.29□□□□□ -0.44
LINC02443-204ENST00000544717 POTEHQ6S545 545 aa12.18□□□□□ -0.46
LINC02443-204ENST00000544717 SPDYE4A6NLX3 237 aa12.16□□□□□ -0.46
LINC02443-204ENST00000544717 OSCARQ8IYS5 282 aa12.06□□□□□ -0.48
LINC02443-204ENST00000544717 RBM42Q9BTD8 480 aaKnown RBP12.05□□□□□ -0.48
LINC02443-204ENST00000544717 ZNF692Q9BU19 519 aaPredicted RBP11.98□□□□□ -0.49
LINC02443-204ENST00000544717 SPDYE2BA6NHP3 402 aa11.97□□□□□ -0.49
LINC02443-204ENST00000544717 SPDYE6P0CI01 402 aa11.97□□□□□ -0.49
LINC02443-204ENST00000544717 SPDYE2Q495Y8 402 aa11.97□□□□□ -0.49
LINC02443-204ENST00000544717 PROM2Q8N271 834 aa11.91□□□□□ -0.5
LINC02443-204ENST00000544717 FBXO3Q9UK99 471 aa11.88□□□□□ -0.51
LINC02443-204ENST00000544717 SSUH2Q9Y2M2 353 aa11.87□□□□□ -0.51
LINC02443-204ENST00000544717 PABPN1Q86U42 306 aaKnown RBP eCLIP11.82□□□□□ -0.52
LINC02443-204ENST00000544717 CHRDL2Q6WN34 429 aa11.75□□□□□ -0.53
LINC02443-204ENST00000544717 AKT1S1Q96B36 256 aa11.72□□□□□ -0.53
LINC02443-204ENST00000544717 VASPP50552 380 aaPredicted RBP11.7□□□□□ -0.54
LINC02443-204ENST00000544717 STAG3Q9UJ98 1225 aa11.67□□□□□ -0.54
LINC02443-204ENST00000544717 AMER1Q5JTC6 1135 aaPredicted RBP11.61□□□□□ -0.55
LINC02443-204ENST00000544717 REM2Q8IYK8 340 aaPredicted RBP11.59□□□□□ -0.55
LINC02443-204ENST00000544717 SPDYE1Q8NFV5 336 aaPredicted RBP11.59□□□□□ -0.55
LINC02443-204ENST00000544717 RTN4Q9NQC3 1192 aaKnown RBP11.57□□□□□ -0.56
LINC02443-204ENST00000544717 PLCD3Q8N3E9 789 aa11.56□□□□□ -0.56
LINC02443-204ENST00000544717 CLEC11AQ9Y240 323 aa11.56□□□□□ -0.56
LINC02443-204ENST00000544717 IFNLR1Q8IU57 520 aaPredicted RBP11.54□□□□□ -0.56
LINC02443-204ENST00000544717 MIER1Q8N108 512 aa11.54□□□□□ -0.56
LINC02443-204ENST00000544717 KLHL34Q8N239 644 aa11.51□□□□□ -0.57
LINC02443-204ENST00000544717 PLEKHG5O94827 1062 aa11.49□□□□□ -0.57
LINC02443-204ENST00000544717 PRR29P0C7W0 189 aa11.46□□□□□ -0.57
LINC02443-204ENST00000544717 PITPNM1O00562 1244 aa11.45□□□□□ -0.58
LINC02443-204ENST00000544717 PIP4P2Q8N4L2 257 aa11.42□□□□□ -0.58
LINC02443-204ENST00000544717 ZBTB47Q9UFB7 747 aaPredicted RBP11.4□□□□□ -0.58
LINC02443-204ENST00000544717 SPOCK2Q92563 424 aa11.39□□□□□ -0.59
LINC02443-204ENST00000544717 FXR2P51116 673 aaKnown RBP eCLIP11.38□□□□□ -0.59
LINC02443-204ENST00000544717 SP7Q8TDD2 431 aaPredicted RBP11.38□□□□□ -0.59
LINC02443-204ENST00000544717 CREBZFQ9NS37 354 aa11.32□□□□□ -0.6
LINC02443-204ENST00000544717 HAX1O00165 279 aa11.24□□□□□ -0.61
LINC02443-204ENST00000544717 CHADLQ6NUI6 762 aa11.23□□□□□ -0.61
LINC02443-204ENST00000544717 PKD2Q13563 968 aa11.22□□□□□ -0.61
LINC02443-204ENST00000544717 CIZ1Q9ULV3 898 aaPredicted RBP11.22□□□□□ -0.61
LINC02443-204ENST00000544717 MNX1P50219 401 aaPredicted RBP11.21□□□□□ -0.61
LINC02443-204ENST00000544717 NPM1P06748 294 aaKnown RBP eCLIP11.19□□□□□ -0.62
LINC02443-204ENST00000544717 PRKAR2AP13861 404 aaKnown RBP11.19□□□□□ -0.62
LINC02443-204ENST00000544717 ECM2O94769 699 aaPredicted RBP11.16□□□□□ -0.62
LINC02443-204ENST00000544717 NUBP1P53384 320 aa11.16□□□□□ -0.62
LINC02443-204ENST00000544717 DCAF8L2P0C7V8 631 aa11.14□□□□□ -0.63
LINC02443-204ENST00000544717 GSE1Q14687 1217 aa11.13□□□□□ -0.63
LINC02443-204ENST00000544717 DCAF8Q5TAQ9 597 aa11.13□□□□□ -0.63
LINC02443-204ENST00000544717 FARP1Q9Y4F1 1045 aaPredicted RBP11.13□□□□□ -0.63
LINC02443-204ENST00000544717 FAM212AQ96EL1 285 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms