RNA–Protein interactions for RNA: ENST00000512839.5

LINC01060-205, Transcript of long intergenic non-protein coding RNA 1060, humanhuman

TSL 1 (best) BASIC

Gene LINC01060, Length 716 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01060-205ENST00000512839 CHIC1Q5VXU3 224 aa19.95■□□□□ 0.78
LINC01060-205ENST00000512839 AEBP2Q6ZN18 517 aaPredicted RBP19.64■□□□□ 0.73
LINC01060-205ENST00000512839 PHF23Q9BUL5 403 aaPredicted RBP17.54■□□□□ 0.4
LINC01060-205ENST00000512839 SENP3Q9H4L4 574 aaPredicted RBP16.69■□□□□ 0.26
LINC01060-205ENST00000512839 PLPPR3Q6T4P5 718 aa16.54■□□□□ 0.24
LINC01060-205ENST00000512839 FOXD1Q16676 465 aa15.3■□□□□ 0.04
LINC01060-205ENST00000512839 ADRA2BP18089 450 aa15.28■□□□□ 0.04
LINC01060-205ENST00000512839 PPP6R1Q9UPN7 881 aa15.21■□□□□ 0.03
LINC01060-205ENST00000512839 KCNA4P22459 653 aa14.97□□□□□ -0.01
LINC01060-205ENST00000512839 EHMT2Q96KQ7 1210 aa14.68□□□□□ -0.06
LINC01060-205ENST00000512839 PIAS4Q8N2W9 510 aaPredicted RBP14.6□□□□□ -0.07
LINC01060-205ENST00000512839 PPP4R3CPQ6ZMV5 832 aa14.59□□□□□ -0.07
LINC01060-205ENST00000512839 NCBP3Q53F19 620 aaKnown RBP14.49□□□□□ -0.09
LINC01060-205ENST00000512839 SLC4A1APQ9BWU0 796 aaKnown RBP14.43□□□□□ -0.1
LINC01060-205ENST00000512839 CSRNP3Q8WYN3 585 aa14.29□□□□□ -0.12
LINC01060-205ENST00000512839 NPM3O75607 178 aaKnown RBP14.19□□□□□ -0.14
LINC01060-205ENST00000512839 SCAF1Q9H7N4 1312 aaKnown RBP14.11□□□□□ -0.15
LINC01060-205ENST00000512839 CNKSR2Q8WXI2 1034 aa14.1□□□□□ -0.15
LINC01060-205ENST00000512839 MSH5O43196 834 aa13.97□□□□□ -0.17
LINC01060-205ENST00000512839 DNAJC5BQ9UF47 199 aa13.93□□□□□ -0.18
LINC01060-205ENST00000512839 ZBTB22O15209 634 aa13.78□□□□□ -0.2
LINC01060-205ENST00000512839 FOXD4L1Q9NU39 408 aa13.69□□□□□ -0.22
LINC01060-205ENST00000512839 RNF216Q9NWF9 866 aaPredicted RBP13.67□□□□□ -0.22
LINC01060-205ENST00000512839 MAPK8IP2Q13387 824 aaPredicted RBP13.57□□□□□ -0.24
LINC01060-205ENST00000512839 HOXD11P31277 338 aaPredicted RBP13.44□□□□□ -0.26
LINC01060-205ENST00000512839 DMRT2Q9Y5R5 561 aa13.42□□□□□ -0.26
LINC01060-205ENST00000512839 ATXN8OSP0DMR3 200 aa13.25□□□□□ -0.29
LINC01060-205ENST00000512839 SLC4A2P04920 1241 aa13.22□□□□□ -0.29
LINC01060-205ENST00000512839 MYCNP04198 464 aaPredicted RBP13.17□□□□□ -0.3
LINC01060-205ENST00000512839 POTEDQ86YR6 584 aa13.08□□□□□ -0.32
LINC01060-205ENST00000512839 AMER1Q5JTC6 1135 aaPredicted RBP13.04□□□□□ -0.32
LINC01060-205ENST00000512839 RTN4Q9NQC3 1192 aaKnown RBP12.88□□□□□ -0.35
LINC01060-205ENST00000512839 FKBP8Q14318 412 aa12.85□□□□□ -0.35
LINC01060-205ENST00000512839 SLC24A1O60721 1099 aa12.82□□□□□ -0.36
LINC01060-205ENST00000512839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.81□□□□□ -0.36
LINC01060-205ENST00000512839 HNRNPUL2Q1KMD3 747 aaKnown RBP12.81□□□□□ -0.36
LINC01060-205ENST00000512839 SAMD1Q6SPF0 538 aaPredicted RBP12.76□□□□□ -0.37
LINC01060-205ENST00000512839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.71□□□□□ -0.37
LINC01060-205ENST00000512839 DCAF8L1A6NGE4 600 aa12.63□□□□□ -0.39
LINC01060-205ENST00000512839 ATF5Q9Y2D1 282 aaPredicted RBP12.61□□□□□ -0.39
LINC01060-205ENST00000512839 U3KPZ7 1027 aaPredicted RBP12.59□□□□□ -0.39
LINC01060-205ENST00000512839 APLP2Q06481 763 aa12.54□□□□□ -0.4
LINC01060-205ENST00000512839 ZNF219Q9P2Y4 722 aaPredicted RBP12.43□□□□□ -0.42
LINC01060-205ENST00000512839 FBXO3Q9UK99 471 aa12.36□□□□□ -0.43
LINC01060-205ENST00000512839 PROM2Q8N271 834 aa12.25□□□□□ -0.45
LINC01060-205ENST00000512839 SPDYE4A6NLX3 237 aa12.24□□□□□ -0.45
LINC01060-205ENST00000512839 FBLN2P98095 1184 aa12.17□□□□□ -0.46
LINC01060-205ENST00000512839 MKRN4PQ13434 485 aaPredicted RBP12.15□□□□□ -0.46
LINC01060-205ENST00000512839 VASPP50552 380 aaPredicted RBP12.09□□□□□ -0.47
LINC01060-205ENST00000512839 ZBTB12Q9Y330 459 aaPredicted RBP12.02□□□□□ -0.49
LINC01060-205ENST00000512839 TRHP20396 242 aaPredicted RBP11.99□□□□□ -0.49
LINC01060-205ENST00000512839 POLA2Q14181 598 aa11.99□□□□□ -0.49
LINC01060-205ENST00000512839 RNF39Q9H2S5 420 aa11.99□□□□□ -0.49
LINC01060-205ENST00000512839 SPINK5Q9NQ38 1064 aaPredicted RBP11.97□□□□□ -0.49
LINC01060-205ENST00000512839 PLCB2Q00722 1185 aa11.96□□□□□ -0.49
LINC01060-205ENST00000512839 C1QBPQ07021 282 aaKnown RBP11.94□□□□□ -0.5
LINC01060-205ENST00000512839 IFNLR1Q8IU57 520 aaPredicted RBP11.93□□□□□ -0.5
LINC01060-205ENST00000512839 CAPN15O75808 1086 aa11.91□□□□□ -0.5
LINC01060-205ENST00000512839 PKD2Q13563 968 aa11.81□□□□□ -0.52
LINC01060-205ENST00000512839 STAG3Q9UJ98 1225 aa11.78□□□□□ -0.52
LINC01060-205ENST00000512839 SPOCK2Q92563 424 aa11.73□□□□□ -0.53
LINC01060-205ENST00000512839 DCAF8L2P0C7V8 631 aa11.72□□□□□ -0.53
LINC01060-205ENST00000512839 SPDYE2BA6NHP3 402 aa11.71□□□□□ -0.53
LINC01060-205ENST00000512839 SPDYE6P0CI01 402 aa11.71□□□□□ -0.53
LINC01060-205ENST00000512839 SPDYE2Q495Y8 402 aa11.71□□□□□ -0.53
LINC01060-205ENST00000512839 HAP1P54257 671 aaPredicted RBP11.69□□□□□ -0.54
LINC01060-205ENST00000512839 ABCB7O75027 752 aa11.68□□□□□ -0.54
LINC01060-205ENST00000512839 VSIG10Q8N0Z9 540 aa11.68□□□□□ -0.54
LINC01060-205ENST00000512839 SSUH2Q9Y2M2 353 aa11.68□□□□□ -0.54
LINC01060-205ENST00000512839 ZNF692Q9BU19 519 aaPredicted RBP11.67□□□□□ -0.54
LINC01060-205ENST00000512839 KLHL34Q8N239 644 aa11.65□□□□□ -0.54
LINC01060-205ENST00000512839 BBXQ8WY36 941 aaPredicted RBP11.64□□□□□ -0.55
LINC01060-205ENST00000512839 BCANQ96GW7 911 aa11.62□□□□□ -0.55
LINC01060-205ENST00000512839 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.62□□□□□ -0.55
LINC01060-205ENST00000512839 DSG3P32926 999 aa11.61□□□□□ -0.55
LINC01060-205ENST00000512839 ECM2O94769 699 aaPredicted RBP11.6□□□□□ -0.55
LINC01060-205ENST00000512839 PLCD3Q8N3E9 789 aa11.57□□□□□ -0.56
LINC01060-205ENST00000512839 OSCARQ8IYS5 282 aa11.55□□□□□ -0.56
LINC01060-205ENST00000512839 ZBTB47Q9UFB7 747 aaPredicted RBP11.55□□□□□ -0.56
LINC01060-205ENST00000512839 PABPN1Q86U42 306 aaKnown RBP eCLIP11.52□□□□□ -0.57
LINC01060-205ENST00000512839 PLEKHG5O94827 1062 aa11.5□□□□□ -0.57
LINC01060-205ENST00000512839 MIER1Q8N108 512 aa11.49□□□□□ -0.57
LINC01060-205ENST00000512839 TRIM41Q8WV44 630 aa11.48□□□□□ -0.57
LINC01060-205ENST00000512839 NPM1P06748 294 aaKnown RBP eCLIP11.45□□□□□ -0.58
LINC01060-205ENST00000512839 RGL2O15211 777 aa11.44□□□□□ -0.58
LINC01060-205ENST00000512839 PAXIP1Q6ZW49 1069 aaPredicted RBP11.43□□□□□ -0.58
LINC01060-205ENST00000512839 SPRYD3Q8NCJ5 442 aa11.41□□□□□ -0.58
LINC01060-205ENST00000512839 TAOK2Q9UL54 1235 aa11.38□□□□□ -0.59
LINC01060-205ENST00000512839 KDM2AQ9Y2K7 1162 aa11.38□□□□□ -0.59
LINC01060-205ENST00000512839 CFAP44Q96MT7 982 aa11.37□□□□□ -0.59
LINC01060-205ENST00000512839 CIZ1Q9ULV3 898 aaPredicted RBP11.34□□□□□ -0.59
LINC01060-205ENST00000512839 DNAJC5Q9H3Z4 198 aa11.33□□□□□ -0.6
LINC01060-205ENST00000512839 GSE1Q14687 1217 aa11.3□□□□□ -0.6
LINC01060-205ENST00000512839 HS6ST3Q8IZP7 471 aa11.3□□□□□ -0.6
LINC01060-205ENST00000512839 CHGAP10645 457 aaKnown RBP11.29□□□□□ -0.6
LINC01060-205ENST00000512839 TSHZ2Q9NRE2 1034 aa11.24□□□□□ -0.61
LINC01060-205ENST00000512839 PRKCSHP14314 528 aaPredicted RBP11.2□□□□□ -0.62
LINC01060-205ENST00000512839 NUBP1P53384 320 aa11.18□□□□□ -0.62
LINC01060-205ENST00000512839 SPDYE1Q8NFV5 336 aaPredicted RBP11.17□□□□□ -0.62
LINC01060-205ENST00000512839 RNF25Q96BH1 459 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms