RNA–Protein interactions for RNA: ENST00000302328.7

SCN11A-201, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN11A, Length 6,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-201ENST00000302328 DCAF8L2P0C7V8 631 aa15.63■□□□□ 0.09
SCN11A-201ENST00000302328 NISCHQ9Y2I1 1504 aa15.02■□□□□ -0
SCN11A-201ENST00000302328 SHROOM4Q9ULL8 1493 aa14.22□□□□□ -0.13
SCN11A-201ENST00000302328 SUPT5HO00267 1087 aaKnown RBP14.2□□□□□ -0.14
SCN11A-201ENST00000302328 FAM9AQ8IZU1 332 aaPredicted RBP13.95□□□□□ -0.18
SCN11A-201ENST00000302328 EHMT2Q96KQ7 1210 aa13.82□□□□□ -0.2
SCN11A-201ENST00000302328 APLP2Q06481 763 aa13.64□□□□□ -0.23
SCN11A-201ENST00000302328 ABCC9O60706 1549 aa13.46□□□□□ -0.26
SCN11A-201ENST00000302328 ATP1B4Q9UN42 357 aaPredicted RBP13.44□□□□□ -0.26
SCN11A-201ENST00000302328 RANGAP1P46060 587 aaPredicted RBP13.44□□□□□ -0.26
SCN11A-201ENST00000302328 TRIM41Q8WV44 630 aa13.25□□□□□ -0.29
SCN11A-201ENST00000302328 TTBK1Q5TCY1 1321 aaPredicted RBP13.25□□□□□ -0.29
SCN11A-201ENST00000302328 PABPN1Q86U42 306 aaKnown RBP eCLIP13.24□□□□□ -0.29
SCN11A-201ENST00000302328 MYT1LQ9UL68 1186 aa13.19□□□□□ -0.3
SCN11A-201ENST00000302328 UBTFP17480 764 aaKnown RBP13.18□□□□□ -0.3
SCN11A-201ENST00000302328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.1□□□□□ -0.31
SCN11A-201ENST00000302328 HNRNPUL2Q1KMD3 747 aaKnown RBP13.1□□□□□ -0.31
SCN11A-201ENST00000302328 FBLN2P98095 1184 aa12.87□□□□□ -0.35
SCN11A-201ENST00000302328 CHIC1Q5VXU3 224 aa12.86□□□□□ -0.35
SCN11A-201ENST00000302328 PCGF6Q9BYE7 350 aa12.77□□□□□ -0.37
SCN11A-201ENST00000302328 SCRIBQ14160 1630 aa12.72□□□□□ -0.37
SCN11A-201ENST00000302328 CCDC180Q9P1Z9 1646 aa12.71□□□□□ -0.37
SCN11A-201ENST00000302328 PELP1Q8IZL8 1130 aaKnown RBP12.68□□□□□ -0.38
SCN11A-201ENST00000302328 CCER1Q8TC90 406 aaPredicted RBP12.68□□□□□ -0.38
SCN11A-201ENST00000302328 ITGAEP38570 1179 aa12.67□□□□□ -0.38
SCN11A-201ENST00000302328 RB1CC1Q8TDY2 1594 aa12.64□□□□□ -0.39
SCN11A-201ENST00000302328 PPARGC1BQ86YN6 1023 aaKnown RBP12.62□□□□□ -0.39
SCN11A-201ENST00000302328 SLC4A1APQ9BWU0 796 aaKnown RBP12.55□□□□□ -0.4
SCN11A-201ENST00000302328 POLR3GLQ9BT43 218 aa12.53□□□□□ -0.4
SCN11A-201ENST00000302328 NPM1P06748 294 aaKnown RBP eCLIP12.51□□□□□ -0.41
SCN11A-201ENST00000302328 BCANQ96GW7 911 aa12.47□□□□□ -0.41
SCN11A-201ENST00000302328 FAM50AQ14320 339 aaKnown RBP12.47□□□□□ -0.41
SCN11A-201ENST00000302328 ZEB1P37275 1124 aaPredicted RBP12.46□□□□□ -0.42
SCN11A-201ENST00000302328 ESF1Q9H501 851 aaKnown RBP12.45□□□□□ -0.42
SCN11A-201ENST00000302328 ARID3CA6NKF2 412 aa12.41□□□□□ -0.42
SCN11A-201ENST00000302328 PLPPR3Q6T4P5 718 aa12.41□□□□□ -0.42
SCN11A-201ENST00000302328 TRIM52Q96A61 297 aa12.41□□□□□ -0.42
SCN11A-201ENST00000302328 NACADO15069 1562 aa12.38□□□□□ -0.43
SCN11A-201ENST00000302328 ERCC6Q03468 1493 aa12.38□□□□□ -0.43
SCN11A-201ENST00000302328 P3H3Q8IVL6 736 aa12.37□□□□□ -0.43
SCN11A-201ENST00000302328 ZCCHC6Q5VYS8 1495 aaKnown RBP12.35□□□□□ -0.43
SCN11A-201ENST00000302328 LOC105371045A0A1W2PR82 267 aa12.32□□□□□ -0.44
SCN11A-201ENST00000302328 CHMP7Q8WUX9 453 aaPredicted RBP12.32□□□□□ -0.44
SCN11A-201ENST00000302328 ZNF777Q9ULD5 760 aaPredicted RBP12.31□□□□□ -0.44
SCN11A-201ENST00000302328 CDK11AQ9UQ88 783 aaPredicted RBP12.31□□□□□ -0.44
SCN11A-201ENST00000302328 CNGB1Q14028 1251 aaPredicted RBP12.29□□□□□ -0.44
SCN11A-201ENST00000302328 STAG3Q9UJ98 1225 aa12.26□□□□□ -0.45
SCN11A-201ENST00000302328 TRIM26Q12899 539 aaPredicted RBP12.24□□□□□ -0.45
SCN11A-201ENST00000302328 NEFLP07196 543 aa12.21□□□□□ -0.46
SCN11A-201ENST00000302328 CENPBP07199 599 aaPredicted RBP12.19□□□□□ -0.46
SCN11A-201ENST00000302328 BAZ1BQ9UIG0 1483 aaKnown RBP12.19□□□□□ -0.46
SCN11A-201ENST00000302328 ZNF326Q5BKZ1 582 aaKnown RBP12.18□□□□□ -0.46
SCN11A-201ENST00000302328 ERICH6Q7L0X2 663 aa12.15□□□□□ -0.46
SCN11A-201ENST00000302328 NEUROD1Q13562 356 aa12.14□□□□□ -0.47
SCN11A-201ENST00000302328 TRHP20396 242 aaPredicted RBP12.14□□□□□ -0.47
SCN11A-201ENST00000302328 CHGAP10645 457 aaKnown RBP12.13□□□□□ -0.47
SCN11A-201ENST00000302328 SLC24A1O60721 1099 aa12.13□□□□□ -0.47
SCN11A-201ENST00000302328 YTHDC1Q96MU7 727 aaKnown RBP12.13□□□□□ -0.47
SCN11A-201ENST00000302328 CSRNP3Q8WYN3 585 aa12.13□□□□□ -0.47
SCN11A-201ENST00000302328 ARID4BQ4LE39 1312 aaPredicted RBP12.08□□□□□ -0.48
SCN11A-201ENST00000302328 KCNH8Q96L42 1107 aa12.05□□□□□ -0.48
SCN11A-201ENST00000302328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.02□□□□□ -0.49
SCN11A-201ENST00000302328 NEFMP07197 916 aa12.01□□□□□ -0.49
SCN11A-201ENST00000302328 SCAF1Q9H7N4 1312 aaKnown RBP11.99□□□□□ -0.49
SCN11A-201ENST00000302328 TSPY4P0CV99 314 aa11.94□□□□□ -0.5
SCN11A-201ENST00000302328 TSPY10P0CW01 314 aa11.94□□□□□ -0.5
SCN11A-201ENST00000302328 PLEKHD1A6NEE1 506 aa11.93□□□□□ -0.5
SCN11A-201ENST00000302328 BAZ1AQ9NRL2 1556 aaPredicted RBP11.93□□□□□ -0.5
SCN11A-201ENST00000302328 C14orf37Q86TY3 774 aa11.92□□□□□ -0.5
SCN11A-201ENST00000302328 DAXXQ9UER7 740 aaPredicted RBP11.92□□□□□ -0.5
SCN11A-201ENST00000302328 PPP1R15AO75807 674 aaPredicted RBP11.91□□□□□ -0.5
SCN11A-201ENST00000302328 CECR2Q9BXF3 1484 aa11.89□□□□□ -0.51
SCN11A-201ENST00000302328 PDS5BQ9NTI5 1447 aa11.89□□□□□ -0.51
SCN11A-201ENST00000302328 MTUS2Q5JR59 1369 aa11.88□□□□□ -0.51
SCN11A-201ENST00000302328 ZBTB47Q9UFB7 747 aaPredicted RBP11.87□□□□□ -0.51
SCN11A-201ENST00000302328 CHIC2Q9UKJ5 165 aa11.87□□□□□ -0.51
SCN11A-201ENST00000302328 SMARCA2P51531 1590 aa11.87□□□□□ -0.51
SCN11A-201ENST00000302328 EIF4G1Q04637 1599 aaKnown RBP11.87□□□□□ -0.51
SCN11A-201ENST00000302328 A0A0G2JS52 829 aa11.84□□□□□ -0.51
SCN11A-201ENST00000302328 HAP1P54257 671 aaPredicted RBP11.83□□□□□ -0.52
SCN11A-201ENST00000302328 SENP3Q9H4L4 574 aaPredicted RBP11.83□□□□□ -0.52
SCN11A-201ENST00000302328 CLSPNQ9HAW4 1339 aa11.83□□□□□ -0.52
SCN11A-201ENST00000302328 KIF27Q86VH2 1401 aa11.83□□□□□ -0.52
SCN11A-201ENST00000302328 ZBTB7CA1YPR0 619 aa11.82□□□□□ -0.52
SCN11A-201ENST00000302328 RSF1Q96T23 1441 aaPredicted RBP11.82□□□□□ -0.52
SCN11A-201ENST00000302328 DCAF1Q9Y4B6 1507 aa11.81□□□□□ -0.52
SCN11A-201ENST00000302328 WRNQ14191 1432 aaPredicted RBP eCLIP11.81□□□□□ -0.52
SCN11A-201ENST00000302328 PLEKHG5O94827 1062 aa11.8□□□□□ -0.52
SCN11A-201ENST00000302328 CANXP27824 592 aaKnown RBP11.79□□□□□ -0.52
SCN11A-201ENST00000302328 ANP32CO43423 234 aa11.77□□□□□ -0.52
SCN11A-201ENST00000302328 AEBP2Q6ZN18 517 aaPredicted RBP11.76□□□□□ -0.53
SCN11A-201ENST00000302328 BCL11AQ9H165 835 aa11.74□□□□□ -0.53
SCN11A-201ENST00000302328 HRCP23327 699 aa11.74□□□□□ -0.53
SCN11A-201ENST00000302328 MLECQ14165 292 aa11.74□□□□□ -0.53
SCN11A-201ENST00000302328 KDM2AQ9Y2K7 1162 aa11.73□□□□□ -0.53
SCN11A-201ENST00000302328 CFDP1Q9UEE9 299 aaPredicted RBP11.72□□□□□ -0.53
SCN11A-201ENST00000302328 TONSLQ96HA7 1378 aa11.72□□□□□ -0.53
SCN11A-201ENST00000302328 CUX2O14529 1486 aa11.7□□□□□ -0.54
SCN11A-201ENST00000302328 GOLGA3Q08378 1498 aa11.7□□□□□ -0.54
SCN11A-201ENST00000302328 CARMIL2Q6F5E8 1435 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms