Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.49□□□□□ -0.096e-6■□□□□ 9.4
PRPF8Q6P2Q9 PPP1R16A-207ENST00000529009 657 ntTSL 314.47□□□□□ -0.096e-6■□□□□ 9.4
PRPF8Q6P2Q9 SH3TC1-203ENST00000457650 617 ntTSL 514.1□□□□□ -0.156e-6■□□□□ 9.4
PRPF8Q6P2Q9 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.92□□□□□ -0.186e-6■□□□□ 9.4
PRPF8Q6P2Q9 SLC13A3-203ENST00000372121 848 ntTSL 513.73□□□□□ -0.216e-6■□□□□ 9.4
PRPF8Q6P2Q9 SLC13A3-206ENST00000420568 1256 ntTSL 513.73□□□□□ -0.216e-6■□□□□ 9.4
PRPF8Q6P2Q9 NR1H3-227ENST00000498548 559 ntTSL 313.71□□□□□ -0.216e-6■□□□□ 9.4
PRPF8Q6P2Q9 HLA-H-201ENST00000383620 1096 ntBASIC13.66□□□□□ -0.226e-6■□□□□ 9.4
PRPF8Q6P2Q9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.6□□□□□ -0.236e-6■□□□□ 9.4
PRPF8Q6P2Q9 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.6□□□□□ -0.236e-6■□□□□ 9.4
PRPF8Q6P2Q9 PALM-209ENST00000592870 1346 ntTSL 213.33□□□□□ -0.286e-6■□□□□ 9.4
PRPF8Q6P2Q9 HSF4-205ENST00000517750 546 ntTSL 513.17□□□□□ -0.36e-6■□□□□ 9.4
PRPF8Q6P2Q9 MEGF6-203ENST00000461795 418 ntTSL 213.05□□□□□ -0.326e-6■□□□□ 9.4
PRPF8Q6P2Q9 PTK7-220ENST00000497957 713 ntTSL 312.84□□□□□ -0.356e-6■□□□□ 9.4
PRPF8Q6P2Q9 NR1H3-222ENST00000483882 572 ntTSL 212.57□□□□□ -0.46e-6■□□□□ 9.4
PRPF8Q6P2Q9 RHBG-209ENST00000622297 720 ntTSL 512.06□□□□□ -0.482e-40■□□□□ 9.4
PRPF8Q6P2Q9 HSF4-221ENST00000522459 358 ntTSL 311.95□□□□□ -0.56e-6■□□□□ 9.4
PRPF8Q6P2Q9 PTK7-206ENST00000461100 546 ntTSL 411.75□□□□□ -0.536e-6■□□□□ 9.4
PRPF8Q6P2Q9 WDR59-216ENST00000569183 949 ntTSL 211.58□□□□□ -0.567e-10■□□□□ 9.4
PRPF8Q6P2Q9 HSF4-208ENST00000519224 637 ntTSL 511.53□□□□□ -0.566e-6■□□□□ 9.4
PRPF8Q6P2Q9 DEAF1-205ENST00000526790 498 ntTSL 211.41□□□□□ -0.586e-6■□□□□ 9.4
PRPF8Q6P2Q9 HSF4-202ENST00000517680 368 ntTSL 311.09□□□□□ -0.636e-6■□□□□ 9.4
PRPF8Q6P2Q9 DMPK-208ENST00000595361 466 ntTSL 511.07□□□□□ -0.646e-6■□□□□ 9.4
PRPF8Q6P2Q9 DCAF11-224ENST00000559472 843 ntTSL 211.03□□□□□ -0.646e-6■□□□□ 9.4
PRPF8Q6P2Q9 TOP1MT-217ENST00000523417 698 ntTSL 310.87□□□□□ -0.676e-6■□□□□ 9.4
PRPF8Q6P2Q9 MYO10-204ENST00000506343 575 ntTSL 410.83□□□□□ -0.686e-6■□□□□ 9.4
PRPF8Q6P2Q9 MYO10-208ENST00000511972 583 ntTSL 310.83□□□□□ -0.686e-6■□□□□ 9.4
PRPF8Q6P2Q9 MYO10-206ENST00000508318 582 ntTSL 210.48□□□□□ -0.736e-6■□□□□ 9.4
PRPF8Q6P2Q9 MYO10-207ENST00000510401 537 ntTSL 310.37□□□□□ -0.756e-6■□□□□ 9.4
PRPF8Q6P2Q9 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.776e-6■□□□□ 9.4
PRPF8Q6P2Q9 TBL2-220ENST00000495885 543 ntTSL 410.24□□□□□ -0.776e-6■□□□□ 9.4
PRPF8Q6P2Q9 AL354993.2-201ENST00000558738 542 ntTSL 4 BASIC10.2□□□□□ -0.786e-6■□□□□ 9.4
PRPF8Q6P2Q9 TOP1MT-204ENST00000518007 509 ntTSL 59.32□□□□□ -0.926e-6■□□□□ 9.4
PRPF8Q6P2Q9 MYO10-209ENST00000512061 807 ntTSL 58.87□□□□□ -0.996e-6■□□□□ 9.4
PRPF8Q6P2Q9 HSF4-219ENST00000522027 447 ntTSL 38.52□□□□□ -1.056e-6■□□□□ 9.4
PRPF8Q6P2Q9 RNPC3-206ENST00000531883 686 ntTSL 28.47□□□□□ -1.056e-6■□□□□ 9.4
PRPF8Q6P2Q9 PTK7-219ENST00000494146 576 ntTSL 48.19□□□□□ -1.16e-6■□□□□ 9.4
PRPF8Q6P2Q9 RNPC3-201ENST00000423855 1872 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.186e-6■□□□□ 9.4
PRPF8Q6P2Q9 AL109930.1-201ENST00000606932 724 ntTSL 5 BASIC7.47□□□□□ -1.216e-6■□□□□ 9.4
PRPF8Q6P2Q9 WDR59-221ENST00000569968 393 ntTSL 27.05□□□□□ -1.287e-10■□□□□ 9.4
PRPF8Q6P2Q9 RNPC3-202ENST00000524631 2013 ntAPPRIS ALT1 TSL 2 BASIC7.01□□□□□ -1.296e-6■□□□□ 9.4
PRPF8Q6P2Q9 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.326e-6■□□□□ 9.4
PRPF8Q6P2Q9 MYO10-211ENST00000513882 2910 ntTSL 26.63□□□□□ -1.356e-6■□□□□ 9.4
PRPF8Q6P2Q9 RBM6-212ENST00000446471 695 ntTSL 45.48□□□□□ -1.536e-6■□□□□ 9.4
PRPF8Q6P2Q9 SLC13A3-207ENST00000450298 707 ntTSL 35.41□□□□□ -1.546e-6■□□□□ 9.4
PRPF8Q6P2Q9 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.626e-6■□□□□ 9.4
PRPF8Q6P2Q9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.726e-6■□□□□ 9.4
PRPF8Q6P2Q9 AP000580.1-201ENST00000404439 358 ntBASIC3.9□□□□□ -1.786e-6■□□□□ 9.4
PRPF8Q6P2Q9 CTNNB1-215ENST00000488914 804 ntTSL 22.1□□□□□ -2.076e-6■□□□□ 9.4
PRPF8Q6P2Q9 SKP1-211ENST00000523359 748 ntTSL 51.8□□□□□ -2.126e-6■□□□□ 9.4
PRPF8Q6P2Q9 ADNP-205ENST00000534467 773 ntTSL 31.23□□□□□ -2.216e-6■□□□□ 9.4
PRPF8Q6P2Q9 RNPC3-205ENST00000527062 768 ntTSL 50.8□□□□□ -2.286e-6■□□□□ 9.4
PRPF8Q6P2Q9 SKP1-207ENST00000520417 610 ntTSL 3-0.27□□□□□ -2.456e-6■□□□□ 9.4
PRPF8Q6P2Q9 ADD1-215ENST00000510101 704 ntTSL 322.01■■□□□ 1.111e-7■□□□□ 9.4
PRPF8Q6P2Q9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.181e-7■□□□□ 9.4
PRPF8Q6P2Q9 MAD1L1-215ENST00000464742 449 ntTSL 513.65□□□□□ -0.221e-7■□□□□ 9.4
PRPF8Q6P2Q9 DMAP1-207ENST00000440641 909 ntTSL 313.59□□□□□ -0.231e-7■□□□□ 9.4
PRPF8Q6P2Q9 BSCL2-217ENST00000524862 865 ntTSL 513.04□□□□□ -0.321e-7■□□□□ 9.4
PRPF8Q6P2Q9 DMAP1-206ENST00000437511 957 ntTSL 311.52□□□□□ -0.571e-7■□□□□ 9.4
PRPF8Q6P2Q9 PHF7-207ENST00000473145 962 ntTSL 211.4□□□□□ -0.581e-7■□□□□ 9.4
PRPF8Q6P2Q9 MAD1L1-222ENST00000491858 494 ntTSL 411.18□□□□□ -0.621e-7■□□□□ 9.4
PRPF8Q6P2Q9 PHF7-210ENST00000614886 1421 ntTSL 1 (best) BASIC9□□□□□ -0.971e-7■□□□□ 9.4
PRPF8Q6P2Q9 MAD1L1-214ENST00000459731 371 ntTSL 38.62□□□□□ -1.031e-7■□□□□ 9.4
PRPF8Q6P2Q9 STON2-205ENST00000555284 2362 ntTSL 1 (best)7.91□□□□□ -1.141e-7■□□□□ 9.4
PRPF8Q6P2Q9 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC7.9□□□□□ -1.141e-7■□□□□ 9.4
PRPF8Q6P2Q9 RPL24-205ENST00000488288 1857 ntTSL 27.83□□□□□ -1.162e-6■□□□□ 9.4
PRPF8Q6P2Q9 CIT-215ENST00000544800 564 ntTSL 47.06□□□□□ -1.281e-7■□□□□ 9.4
PRPF8Q6P2Q9 PHF7-208ENST00000482327 576 ntTSL 26.98□□□□□ -1.291e-7■□□□□ 9.4
PRPF8Q6P2Q9 STON2-201ENST00000267540 2977 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.331e-7■□□□□ 9.4
PRPF8Q6P2Q9 CIT-213ENST00000543324 497 ntTSL 36.36□□□□□ -1.391e-7■□□□□ 9.4
PRPF8Q6P2Q9 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.411e-7■□□□□ 9.4
PRPF8Q6P2Q9 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.481e-7■□□□□ 9.4
PRPF8Q6P2Q9 BSCL2-219ENST00000526426 353 ntTSL 35.77□□□□□ -1.491e-7■□□□□ 9.4
PRPF8Q6P2Q9 BSCL2-223ENST00000531524 844 ntTSL 34.57□□□□□ -1.681e-7■□□□□ 9.4
PRPF8Q6P2Q9 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC3.94□□□□□ -1.781e-7■□□□□ 9.4
PRPF8Q6P2Q9 ADD1-220ENST00000534870 795 ntTSL 23.82□□□□□ -1.81e-7■□□□□ 9.4
PRPF8Q6P2Q9 STON2-202ENST00000553821 686 ntTSL 32.79□□□□□ -1.961e-7■□□□□ 9.4
PRPF8Q6P2Q9 PHF7-206ENST00000472337 387 ntTSL 52.43□□□□□ -2.021e-7■□□□□ 9.4
PRPF8Q6P2Q9 C2CD2L-209ENST00000533458 1639 ntTSL 215.76■□□□□ 0.114e-7■□□□□ 9.4
PRPF8Q6P2Q9 YWHAG-201ENST00000307630 3750 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.97e-9■□□□□ 9.4
PRPF8Q6P2Q9 FGFR1-210ENST00000413133 587 ntTSL 413.07□□□□□ -0.329e-11■□□□□ 9.4
PRPF8Q6P2Q9 GALNT12-203ENST00000610463 550 ntTSL 416.58■□□□□ 0.241e-9■□□□□ 9.4
PRPF8Q6P2Q9 LRP1-206ENST00000554118 418 ntTSL 26.7□□□□□ -1.341e-6■□□□□ 9.4
PRPF8Q6P2Q9 RAB11FIP3-207ENST00000461009 514 ntTSL 211.17□□□□□ -0.627e-9■□□□□ 9.4
PRPF8Q6P2Q9 MBOAT2-204ENST00000471753 1227 ntTSL 56.95□□□□□ -1.32e-6■□□□□ 9.4
PRPF8Q6P2Q9 MYH9-204ENST00000459960 687 ntTSL 28.89□□□□□ -0.996e-7■□□□□ 9.4
PRPF8Q6P2Q9 GNL1-203ENST00000462708 774 ntTSL 27.34□□□□□ -1.231e-8■□□□□ 9.4
PRPF8Q6P2Q9 PCSK6-212ENST00000560785 507 ntTSL 410.86□□□□□ -0.671e-12■□□□□ 9.4
PRPF8Q6P2Q9 SORD-204ENST00000558789 1553 ntTSL 212.82□□□□□ -0.363e-9■□□□□ 9.4
PRPF8Q6P2Q9 SORD-205ENST00000559230 1502 ntTSL 1 (best)9.89□□□□□ -0.833e-9■□□□□ 9.4
PRPF8Q6P2Q9 SORD-201ENST00000267814 4909 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.143e-9■□□□□ 9.4
PRPF8Q6P2Q9 UBE2C-205ENST00000372568 914 ntTSL 2 BASIC8.12□□□□□ -1.111e-6■□□□□ 9.4
PRPF8Q6P2Q9 ATXN7-204ENST00000474112 3367 ntTSL 213.64□□□□□ -0.233e-11■□□□□ 9.4
PRPF8Q6P2Q9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.283e-11■□□□□ 9.4
PRPF8Q6P2Q9 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.363e-11■□□□□ 9.4
PRPF8Q6P2Q9 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.563e-11■□□□□ 9.4
PRPF8Q6P2Q9 ATXN7-209ENST00000484668 573 ntTSL 34.94□□□□□ -1.623e-11■□□□□ 9.4
PRPF8Q6P2Q9 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.85□□□□□ -1.633e-11■□□□□ 9.4
PRPF8Q6P2Q9 ATXN7-203ENST00000472569 536 ntTSL 24.64□□□□□ -1.673e-11■□□□□ 9.4
PRPF8Q6P2Q9 ATXN7-202ENST00000466529 758 ntTSL 24.46□□□□□ -1.693e-11■□□□□ 9.4
Retrieved 100 of 73,762 protein–RNA pairs in 459.7 ms