RNA–Protein interactions for RNA: ENST00000527062.5

RNPC3-205, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 5

Gene RNPC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-205ENST00000527062 AEBP2Q6ZN18 517 aaPredicted RBP28.48■■■□□ 2.15
RNPC3-205ENST00000527062 CHIC1Q5VXU3 224 aa26.68■■□□□ 1.86
RNPC3-205ENST00000527062 SENP3Q9H4L4 574 aaPredicted RBP24.24■■□□□ 1.47
RNPC3-205ENST00000527062 PHF23Q9BUL5 403 aaPredicted RBP23.91■■□□□ 1.42
RNPC3-205ENST00000527062 FOXD1Q16676 465 aa22.7■■□□□ 1.22
RNPC3-205ENST00000527062 POTEDQ86YR6 584 aa21.37■■□□□ 1.01
RNPC3-205ENST00000527062 MSH5O43196 834 aa21.28■■□□□ 1
RNPC3-205ENST00000527062 PLPPR3Q6T4P5 718 aa21.14■□□□□ 0.97
RNPC3-205ENST00000527062 PIAS4Q8N2W9 510 aaPredicted RBP21.09■□□□□ 0.97
RNPC3-205ENST00000527062 PPP6R1Q9UPN7 881 aa21.01■□□□□ 0.95
RNPC3-205ENST00000527062 ADRA2BP18089 450 aa20.9■□□□□ 0.94
RNPC3-205ENST00000527062 MAPK8IP2Q13387 824 aaPredicted RBP19.31■□□□□ 0.68
RNPC3-205ENST00000527062 DMRT2Q9Y5R5 561 aa19.2■□□□□ 0.66
RNPC3-205ENST00000527062 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
RNPC3-205ENST00000527062 PPP4R3CPQ6ZMV5 832 aa18.52■□□□□ 0.56
RNPC3-205ENST00000527062 CACNB1Q02641 598 aaPredicted RBP18.46■□□□□ 0.55
RNPC3-205ENST00000527062 DCAF8L1A6NGE4 600 aa18.4■□□□□ 0.54
RNPC3-205ENST00000527062 HOXD11P31277 338 aaPredicted RBP18.38■□□□□ 0.53
RNPC3-205ENST00000527062 CNKSR2Q8WXI2 1034 aa18.22■□□□□ 0.51
RNPC3-205ENST00000527062 RNF39Q9H2S5 420 aa18.18■□□□□ 0.5
RNPC3-205ENST00000527062 RNF216Q9NWF9 866 aaPredicted RBP18.14■□□□□ 0.49
RNPC3-205ENST00000527062 C1QBPQ07021 282 aaKnown RBP17.84■□□□□ 0.45
RNPC3-205ENST00000527062 DNAJC5BQ9UF47 199 aa17.75■□□□□ 0.43
RNPC3-205ENST00000527062 NCBP3Q53F19 620 aaKnown RBP17.64■□□□□ 0.41
RNPC3-205ENST00000527062 NPM3O75607 178 aaKnown RBP17.48■□□□□ 0.39
RNPC3-205ENST00000527062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.46■□□□□ 0.39
RNPC3-205ENST00000527062 U3KPZ7 1027 aaPredicted RBP17.14■□□□□ 0.33
RNPC3-205ENST00000527062 SPINK5Q9NQ38 1064 aaPredicted RBP16.99■□□□□ 0.31
RNPC3-205ENST00000527062 DSG3P32926 999 aa16.92■□□□□ 0.3
RNPC3-205ENST00000527062 CAPN15O75808 1086 aa16.91■□□□□ 0.3
RNPC3-205ENST00000527062 KCNA4P22459 653 aa16.88■□□□□ 0.29
RNPC3-205ENST00000527062 SLC4A2P04920 1241 aa16.8■□□□□ 0.28
RNPC3-205ENST00000527062 POTEHQ6S545 545 aa16.66■□□□□ 0.26
RNPC3-205ENST00000527062 TRHP20396 242 aaPredicted RBP16.58■□□□□ 0.24
RNPC3-205ENST00000527062 ABCB7O75027 752 aa16.54■□□□□ 0.24
RNPC3-205ENST00000527062 ZNF219Q9P2Y4 722 aaPredicted RBP16.5■□□□□ 0.23
RNPC3-205ENST00000527062 APLP2Q06481 763 aa16.48■□□□□ 0.23
RNPC3-205ENST00000527062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.42■□□□□ 0.22
RNPC3-205ENST00000527062 HNRNPUL2Q1KMD3 747 aaKnown RBP16.42■□□□□ 0.22
RNPC3-205ENST00000527062 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
RNPC3-205ENST00000527062 MYCNP04198 464 aaPredicted RBP16.13■□□□□ 0.17
RNPC3-205ENST00000527062 RBM42Q9BTD8 480 aaKnown RBP16.08■□□□□ 0.16
RNPC3-205ENST00000527062 POLA2Q14181 598 aa16.07■□□□□ 0.16
RNPC3-205ENST00000527062 SLC4A1APQ9BWU0 796 aaKnown RBP16.03■□□□□ 0.16
RNPC3-205ENST00000527062 CHRDL2Q6WN34 429 aa15.9■□□□□ 0.14
RNPC3-205ENST00000527062 ATF5Q9Y2D1 282 aaPredicted RBP15.87■□□□□ 0.13
RNPC3-205ENST00000527062 FOXD4L1Q9NU39 408 aa15.81■□□□□ 0.12
RNPC3-205ENST00000527062 AKT1S1Q96B36 256 aa15.67■□□□□ 0.1
RNPC3-205ENST00000527062 ZBTB12Q9Y330 459 aaPredicted RBP15.65■□□□□ 0.1
RNPC3-205ENST00000527062 OSCARQ8IYS5 282 aa15.6■□□□□ 0.09
RNPC3-205ENST00000527062 ZBTB22O15209 634 aa15.56■□□□□ 0.08
RNPC3-205ENST00000527062 REM2Q8IYK8 340 aaPredicted RBP15.56■□□□□ 0.08
RNPC3-205ENST00000527062 PIP4P2Q8N4L2 257 aa15.49■□□□□ 0.07
RNPC3-205ENST00000527062 EHMT2Q96KQ7 1210 aa15.49■□□□□ 0.07
RNPC3-205ENST00000527062 SP7Q8TDD2 431 aaPredicted RBP15.47■□□□□ 0.07
RNPC3-205ENST00000527062 PITPNM1O00562 1244 aa15.42■□□□□ 0.06
RNPC3-205ENST00000527062 CSRNP3Q8WYN3 585 aa15.38■□□□□ 0.05
RNPC3-205ENST00000527062 FXR2P51116 673 aaKnown RBP eCLIP15.33■□□□□ 0.04
RNPC3-205ENST00000527062 ATXN8OSP0DMR3 200 aa15.31■□□□□ 0.04
RNPC3-205ENST00000527062 HAX1O00165 279 aa15.24■□□□□ 0.03
RNPC3-205ENST00000527062 SPDYE2BA6NHP3 402 aa15.17■□□□□ 0.02
RNPC3-205ENST00000527062 SPDYE6P0CI01 402 aa15.17■□□□□ 0.02
RNPC3-205ENST00000527062 SPDYE2Q495Y8 402 aa15.17■□□□□ 0.02
RNPC3-205ENST00000527062 FBLN2P98095 1184 aa15.15■□□□□ 0.02
RNPC3-205ENST00000527062 EVX2Q03828 476 aa15.12■□□□□ 0.01
RNPC3-205ENST00000527062 MKRN4PQ13434 485 aaPredicted RBP15.11■□□□□ 0.01
RNPC3-205ENST00000527062 PRKAR2AP13861 404 aaKnown RBP14.99□□□□□ -0.01
RNPC3-205ENST00000527062 CLEC11AQ9Y240 323 aa14.99□□□□□ -0.01
RNPC3-205ENST00000527062 SSUH2Q9Y2M2 353 aa14.98□□□□□ -0.01
RNPC3-205ENST00000527062 SPDYE1Q8NFV5 336 aaPredicted RBP14.97□□□□□ -0.01
RNPC3-205ENST00000527062 ZNF692Q9BU19 519 aaPredicted RBP14.95□□□□□ -0.02
RNPC3-205ENST00000527062 C19orf67A6NJJ6 358 aa14.85□□□□□ -0.03
RNPC3-205ENST00000527062 CHADLQ6NUI6 762 aa14.79□□□□□ -0.04
RNPC3-205ENST00000527062 PABPN1Q86U42 306 aaKnown RBP eCLIP14.74□□□□□ -0.05
RNPC3-205ENST00000527062 GABBR2O75899 941 aa14.71□□□□□ -0.05
RNPC3-205ENST00000527062 PRR29P0C7W0 189 aa14.68□□□□□ -0.06
RNPC3-205ENST00000527062 FARP1Q9Y4F1 1045 aaPredicted RBP14.5□□□□□ -0.09
RNPC3-205ENST00000527062 CD44P16070 742 aaKnown RBP14.49□□□□□ -0.09
RNPC3-205ENST00000527062 LHX8Q68G74 356 aa14.49□□□□□ -0.09
RNPC3-205ENST00000527062 POTEIP0CG38 1075 aa14.45□□□□□ -0.1
RNPC3-205ENST00000527062 CREBZFQ9NS37 354 aa14.31□□□□□ -0.12
RNPC3-205ENST00000527062 CLCN6P51797 869 aa14.26□□□□□ -0.13
RNPC3-205ENST00000527062 ZNF579Q8NAF0 562 aaKnown RBP14.26□□□□□ -0.13
RNPC3-205ENST00000527062 ZRANB1Q9UGI0 708 aa14.24□□□□□ -0.13
RNPC3-205ENST00000527062 DCBLD2Q96PD2 775 aa14.2□□□□□ -0.14
RNPC3-205ENST00000527062 STAG3Q9UJ98 1225 aa14.2□□□□□ -0.14
RNPC3-205ENST00000527062 SPDYE4A6NLX3 237 aa14.18□□□□□ -0.14
RNPC3-205ENST00000527062 GALR2O43603 387 aaPredicted RBP14.14□□□□□ -0.15
RNPC3-205ENST00000527062 PHF12Q96QT6 1004 aa14.05□□□□□ -0.16
RNPC3-205ENST00000527062 MNX1P50219 401 aaPredicted RBP14.04□□□□□ -0.16
RNPC3-205ENST00000527062 PAK3O75914 559 aaPredicted RBP13.99□□□□□ -0.17
RNPC3-205ENST00000527062 POTEB2H3BUK9 544 aa13.97□□□□□ -0.17
RNPC3-205ENST00000527062 NPM1P06748 294 aaKnown RBP eCLIP13.94□□□□□ -0.18
RNPC3-205ENST00000527062 OTUD5Q96G74 571 aa13.94□□□□□ -0.18
RNPC3-205ENST00000527062 PELP1Q8IZL8 1130 aaKnown RBP13.92□□□□□ -0.18
RNPC3-205ENST00000527062 FKBP8Q14318 412 aa13.88□□□□□ -0.19
RNPC3-205ENST00000527062 MS4A3Q96HJ5 214 aa13.85□□□□□ -0.19
RNPC3-205ENST00000527062 PROM2Q8N271 834 aa13.83□□□□□ -0.2
RNPC3-205ENST00000527062 PLSCR2Q9NRY7 297 aa13.81□□□□□ -0.2
RNPC3-205ENST00000527062 ASTLQ6HA08 431 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms