Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 AC021733.2-201ENST00000518830 497 ntBASIC10.84□□□□□ -0.67
PHF8Q9UPP1 AP001207.1-201ENST00000524051 481 ntBASIC10.84□□□□□ -0.67
PHF8Q9UPP1 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 AC009063.1-201ENST00000563342 702 ntBASIC10.84□□□□□ -0.67
PHF8Q9UPP1 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 ACP5-208ENST00000590420 301 ntTSL 5 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 RPS11-203ENST00000596873 583 ntTSL 2 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 AC140658.6-201ENST00000603958 201 ntBASIC10.84□□□□□ -0.67
PHF8Q9UPP1 U1.22-201ENST00000605806 164 ntBASIC10.84□□□□□ -0.67
PHF8Q9UPP1 RN7SL82P-201ENST00000611435 237 ntBASIC10.84□□□□□ -0.67
PHF8Q9UPP1 5S_rRNA.20-201ENST00000612104 118 ntBASIC10.84□□□□□ -0.67
PHF8Q9UPP1 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 RN7SL628P-201ENST00000619139 237 ntBASIC10.84□□□□□ -0.67
PHF8Q9UPP1 AC015871.5-202ENST00000623252 701 ntBASIC10.84□□□□□ -0.67
PHF8Q9UPP1 ASB8-218ENST00000629941 278 ntTSL 5 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 AC091305.2-201ENST00000624049 1576 ntBASIC10.84□□□□□ -0.67
PHF8Q9UPP1 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 ZKSCAN3-202ENST00000341464 1794 ntTSL 2 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 PTCHD4-201ENST00000339488 2850 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 ARHGEF9-225ENST00000636276 4097 ntTSL 5 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 ZNF343-201ENST00000278772 3632 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 RBM46-202ENST00000510397 3626 ntTSL 2 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 MELK-208ENST00000536987 2125 ntTSL 2 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 AP000641.1-201ENST00000531988 1639 ntBASIC10.84□□□□□ -0.67
PHF8Q9UPP1 AMBN-202ENST00000449493 1512 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 ADAM10-201ENST00000260408 11431 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PHF8Q9UPP1 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.67
PHF8Q9UPP1 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC10.83□□□□□ -0.67
PHF8Q9UPP1 CD164-201ENST00000275080 2954 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 APOL2-202ENST00000358502 2551 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 AL355852.1-201ENST00000454081 1771 ntBASIC10.83□□□□□ -0.68
PHF8Q9UPP1 WARS-204ENST00000392882 2938 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 IL5RA-206ENST00000430514 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 NLRP4-201ENST00000301295 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 EXOC7-220ENST00000607838 3353 ntTSL 5 BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 RNU4-91P-201ENST00000364778 135 ntBASIC10.83□□□□□ -0.68
PHF8Q9UPP1 RN7SKP137-201ENST00000411074 307 ntBASIC10.83□□□□□ -0.68
PHF8Q9UPP1 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 AL390840.1-201ENST00000420303 988 ntBASIC10.83□□□□□ -0.68
PHF8Q9UPP1 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 AL512882.1-201ENST00000436086 832 ntBASIC10.83□□□□□ -0.68
PHF8Q9UPP1 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 PAXBP1P1-201ENST00000449315 447 ntBASIC10.83□□□□□ -0.68
PHF8Q9UPP1 RPL4P1-201ENST00000496596 1278 ntBASIC10.83□□□□□ -0.68
PHF8Q9UPP1 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 AL136985.2-201ENST00000607372 535 ntBASIC10.83□□□□□ -0.68
PHF8Q9UPP1 AL121985.2-201ENST00000621192 555 ntBASIC10.83□□□□□ -0.68
PHF8Q9UPP1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 LINC00710-219ENST00000635054 938 ntTSL 5 BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 LINC00558-201ENST00000569422 3163 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 CALN1-202ENST00000395275 9459 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PHF8Q9UPP1 PAPD4-202ENST00000423041 3223 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 SYT2-202ENST00000367268 7598 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 ARL6IP5-201ENST00000273258 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 EFHC1-226ENST00000636954 2129 ntTSL 2 BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 OR7E11P-202ENST00000642027 1491 ntBASIC10.82□□□□□ -0.68
PHF8Q9UPP1 CU633906.2-201ENST00000624576 2257 ntTSL 5 BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 SLC34A2-201ENST00000382051 4122 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 GPLD1-201ENST00000230036 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
PHF8Q9UPP1 NPIPA5-201ENST00000360151 1088 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms