RNA–Protein interactions for RNA: ENST00000636954.1

EFHC1-226, Transcript of EF-hand domain containing 1, humanhuman

TSL 2 BASIC

Gene EFHC1, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-226ENST00000636954 NISCHQ9Y2I1 1504 aa18.43■□□□□ 0.54
EFHC1-226ENST00000636954 SHROOM4Q9ULL8 1493 aa15.92■□□□□ 0.14
EFHC1-226ENST00000636954 SUPT5HO00267 1087 aaKnown RBP15.77■□□□□ 0.12
EFHC1-226ENST00000636954 ZCCHC6Q5VYS8 1495 aaKnown RBP15.63■□□□□ 0.09
EFHC1-226ENST00000636954 HRCP23327 699 aa15.53■□□□□ 0.08
EFHC1-226ENST00000636954 CHIC1Q5VXU3 224 aa15.5■□□□□ 0.07
EFHC1-226ENST00000636954 CCDC180Q9P1Z9 1646 aa15.5■□□□□ 0.07
EFHC1-226ENST00000636954 MYO15BQ96JP2 1530 aa15.49■□□□□ 0.07
EFHC1-226ENST00000636954 PCGF6Q9BYE7 350 aa15.31■□□□□ 0.04
EFHC1-226ENST00000636954 DCAF8L2P0C7V8 631 aa15.21■□□□□ 0.03
EFHC1-226ENST00000636954 DCAF1Q9Y4B6 1507 aa15.17■□□□□ 0.02
EFHC1-226ENST00000636954 PPARGC1BQ86YN6 1023 aaKnown RBP15.14■□□□□ 0.01
EFHC1-226ENST00000636954 LOC105371045A0A1W2PR82 267 aa15.06■□□□□ 0
EFHC1-226ENST00000636954 TRIM26Q12899 539 aaPredicted RBP14.97□□□□□ -0.01
EFHC1-226ENST00000636954 ABCC9O60706 1549 aa14.79□□□□□ -0.04
EFHC1-226ENST00000636954 ZEB1P37275 1124 aaPredicted RBP14.78□□□□□ -0.04
EFHC1-226ENST00000636954 RSF1Q96T23 1441 aaPredicted RBP14.7□□□□□ -0.06
EFHC1-226ENST00000636954 TRIM41Q8WV44 630 aa14.68□□□□□ -0.06
EFHC1-226ENST00000636954 SCRIBQ14160 1630 aa14.58□□□□□ -0.07
EFHC1-226ENST00000636954 RB1CC1Q8TDY2 1594 aa14.58□□□□□ -0.08
EFHC1-226ENST00000636954 PELP1Q8IZL8 1130 aaKnown RBP14.57□□□□□ -0.08
EFHC1-226ENST00000636954 FAM9AQ8IZU1 332 aaPredicted RBP14.56□□□□□ -0.08
EFHC1-226ENST00000636954 SCAF1Q9H7N4 1312 aaKnown RBP14.49□□□□□ -0.09
EFHC1-226ENST00000636954 EHMT2Q96KQ7 1210 aa14.42□□□□□ -0.1
EFHC1-226ENST00000636954 CECR2Q9BXF3 1484 aa14.36□□□□□ -0.11
EFHC1-226ENST00000636954 MROH2BQ7Z745 1585 aa14.34□□□□□ -0.11
EFHC1-226ENST00000636954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.29□□□□□ -0.12
EFHC1-226ENST00000636954 WIZO95785 1651 aa14.28□□□□□ -0.12
EFHC1-226ENST00000636954 NACADO15069 1562 aa14.28□□□□□ -0.12
EFHC1-226ENST00000636954 CCER1Q8TC90 406 aaPredicted RBP14.27□□□□□ -0.12
EFHC1-226ENST00000636954 ACIN1Q9UKV3 1341 aaKnown RBP14.27□□□□□ -0.12
EFHC1-226ENST00000636954 NEUROD1Q13562 356 aa14.21□□□□□ -0.13
EFHC1-226ENST00000636954 EIF4G1Q04637 1599 aaKnown RBP14.2□□□□□ -0.14
EFHC1-226ENST00000636954 BAZ1AQ9NRL2 1556 aaPredicted RBP14.2□□□□□ -0.14
EFHC1-226ENST00000636954 DIEXFQ68CQ4 756 aaKnown RBP14.17□□□□□ -0.14
EFHC1-226ENST00000636954 WRNQ14191 1432 aaPredicted RBP eCLIP14.16□□□□□ -0.14
EFHC1-226ENST00000636954 CENPBP07199 599 aaPredicted RBP14.13□□□□□ -0.15
EFHC1-226ENST00000636954 GTF3C3Q9Y5Q9 886 aa14.1□□□□□ -0.15
EFHC1-226ENST00000636954 CCDC88BA6NC98 1476 aa14.07□□□□□ -0.16
EFHC1-226ENST00000636954 CEP162Q5TB80 1403 aa14.07□□□□□ -0.16
EFHC1-226ENST00000636954 ABCC8Q09428 1581 aa14.06□□□□□ -0.16
EFHC1-226ENST00000636954 TNIKQ9UKE5 1360 aa14.05□□□□□ -0.16
EFHC1-226ENST00000636954 TOP2AP11388 1531 aaKnown RBP14.05□□□□□ -0.16
EFHC1-226ENST00000636954 TTBK1Q5TCY1 1321 aaPredicted RBP14.03□□□□□ -0.16
EFHC1-226ENST00000636954 ZNF316A6NFI3 1004 aaPredicted RBP14□□□□□ -0.17
EFHC1-226ENST00000636954 SOGA1O94964 1423 aa14□□□□□ -0.17
EFHC1-226ENST00000636954 SMARCA2P51531 1590 aa13.99□□□□□ -0.17
EFHC1-226ENST00000636954 EEA1Q15075 1411 aa13.98□□□□□ -0.17
EFHC1-226ENST00000636954 CSRNP3Q8WYN3 585 aa13.97□□□□□ -0.17
EFHC1-226ENST00000636954 SMARCA4P51532 1647 aa13.96□□□□□ -0.17
EFHC1-226ENST00000636954 UBTFP17480 764 aaKnown RBP13.94□□□□□ -0.18
EFHC1-226ENST00000636954 MYT1Q01538 1121 aa13.93□□□□□ -0.18
EFHC1-226ENST00000636954 RUSC2Q8N2Y8 1516 aa13.93□□□□□ -0.18
EFHC1-226ENST00000636954 GOLGA3Q08378 1498 aa13.89□□□□□ -0.19
EFHC1-226ENST00000636954 MIER1Q8N108 512 aa13.83□□□□□ -0.2
EFHC1-226ENST00000636954 YTHDC1Q96MU7 727 aaKnown RBP13.83□□□□□ -0.2
EFHC1-226ENST00000636954 HNRNPUL2Q1KMD3 747 aaKnown RBP13.81□□□□□ -0.2
EFHC1-226ENST00000636954 UNC13AQ9UPW8 1703 aa13.79□□□□□ -0.2
EFHC1-226ENST00000636954 CEP164Q9UPV0 1460 aa13.79□□□□□ -0.2
EFHC1-226ENST00000636954 KIF21BO75037 1637 aa13.77□□□□□ -0.21
EFHC1-226ENST00000636954 CLIP1P30622 1438 aa13.75□□□□□ -0.21
EFHC1-226ENST00000636954 VPS8Q8N3P4 1428 aa13.73□□□□□ -0.21
EFHC1-226ENST00000636954 SYNJ1O43426 1573 aa13.71□□□□□ -0.22
EFHC1-226ENST00000636954 APLP2Q06481 763 aa13.7□□□□□ -0.22
EFHC1-226ENST00000636954 BAZ1BQ9UIG0 1483 aaKnown RBP13.69□□□□□ -0.22
EFHC1-226ENST00000636954 PEG3Q9GZU2 1588 aa13.68□□□□□ -0.22
EFHC1-226ENST00000636954 RAPGEF2Q9Y4G8 1499 aa13.64□□□□□ -0.23
EFHC1-226ENST00000636954 CLSPNQ9HAW4 1339 aa13.64□□□□□ -0.23
EFHC1-226ENST00000636954 BICRAQ9NZM4 1560 aa13.6□□□□□ -0.23
EFHC1-226ENST00000636954 PABPN1Q86U42 306 aaKnown RBP eCLIP13.6□□□□□ -0.23
EFHC1-226ENST00000636954 DHX57Q6P158 1386 aaKnown RBP13.58□□□□□ -0.24
EFHC1-226ENST00000636954 RANGAP1P46060 587 aaPredicted RBP13.56□□□□□ -0.24
EFHC1-226ENST00000636954 ATAD2BQ9ULI0 1458 aa13.54□□□□□ -0.24
EFHC1-226ENST00000636954 TOP2BQ02880 1626 aa13.52□□□□□ -0.25
EFHC1-226ENST00000636954 SUPT16HQ9Y5B9 1047 aaKnown RBP13.51□□□□□ -0.25
EFHC1-226ENST00000636954 ERICH3Q5RHP9 1530 aa13.49□□□□□ -0.25
EFHC1-226ENST00000636954 ARAP1Q96P48 1450 aa13.49□□□□□ -0.25
EFHC1-226ENST00000636954 KANK4Q5T7N3 995 aaPredicted RBP13.49□□□□□ -0.25
EFHC1-226ENST00000636954 PRXQ9BXM0 1461 aa13.48□□□□□ -0.25
EFHC1-226ENST00000636954 RRBP1Q9P2E9 1410 aaKnown RBP13.47□□□□□ -0.25
EFHC1-226ENST00000636954 BIVM-ERCC5R4GMW8 1640 aa13.46□□□□□ -0.25
EFHC1-226ENST00000636954 CUX2O14529 1486 aa13.44□□□□□ -0.26
EFHC1-226ENST00000636954 AEBP2Q6ZN18 517 aaPredicted RBP13.42□□□□□ -0.26
EFHC1-226ENST00000636954 CCNB3Q8WWL7 1395 aa13.39□□□□□ -0.27
EFHC1-226ENST00000636954 TSHZ2Q9NRE2 1034 aa13.38□□□□□ -0.27
EFHC1-226ENST00000636954 KIF27Q86VH2 1401 aa13.35□□□□□ -0.27
EFHC1-226ENST00000636954 ARHGAP35Q9NRY4 1499 aa13.33□□□□□ -0.28
EFHC1-226ENST00000636954 CUX1P39880 1505 aa13.32□□□□□ -0.28
EFHC1-226ENST00000636954 ITGAEP38570 1179 aa13.31□□□□□ -0.28
EFHC1-226ENST00000636954 KCNH8Q96L42 1107 aa13.31□□□□□ -0.28
EFHC1-226ENST00000636954 RAB3GAP2Q9H2M9 1393 aa13.31□□□□□ -0.28
EFHC1-226ENST00000636954 MAPKBP1O60336 1514 aa13.3□□□□□ -0.28
EFHC1-226ENST00000636954 ANP32EQ9BTT0 268 aa13.27□□□□□ -0.28
EFHC1-226ENST00000636954 SETD5Q9C0A6 1442 aa13.25□□□□□ -0.29
EFHC1-226ENST00000636954 MAP3K1Q13233 1512 aa13.25□□□□□ -0.29
EFHC1-226ENST00000636954 TIAM1Q13009 1591 aa13.23□□□□□ -0.29
EFHC1-226ENST00000636954 NCAPD3P42695 1498 aa13.23□□□□□ -0.29
EFHC1-226ENST00000636954 DDX10Q13206 875 aaKnown RBP13.23□□□□□ -0.29
EFHC1-226ENST00000636954 HMGXB3Q12766 1538 aa13.23□□□□□ -0.29
EFHC1-226ENST00000636954 WDR97A6NE52 1622 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms