RNA–Protein interactions for RNA: ENST00000554042.1

AL450442.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL450442.1, Length 854 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL450442.1-201ENST00000554042 AEBP2Q6ZN18 517 aaPredicted RBP23.14■■□□□ 1.29
AL450442.1-201ENST00000554042 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
AL450442.1-201ENST00000554042 SENP3Q9H4L4 574 aaPredicted RBP19.67■□□□□ 0.74
AL450442.1-201ENST00000554042 PHF23Q9BUL5 403 aaPredicted RBP19.63■□□□□ 0.73
AL450442.1-201ENST00000554042 FOXD1Q16676 465 aa18.3■□□□□ 0.52
AL450442.1-201ENST00000554042 PLPPR3Q6T4P5 718 aa18.01■□□□□ 0.47
AL450442.1-201ENST00000554042 POTEDQ86YR6 584 aa17.45■□□□□ 0.38
AL450442.1-201ENST00000554042 PPP6R1Q9UPN7 881 aa17.42■□□□□ 0.38
AL450442.1-201ENST00000554042 ADRA2BP18089 450 aa17.39■□□□□ 0.37
AL450442.1-201ENST00000554042 PIAS4Q8N2W9 510 aaPredicted RBP17.18■□□□□ 0.34
AL450442.1-201ENST00000554042 MSH5O43196 834 aa16.97■□□□□ 0.31
AL450442.1-201ENST00000554042 SCAF1Q9H7N4 1312 aaKnown RBP15.9■□□□□ 0.14
AL450442.1-201ENST00000554042 MAPK8IP2Q13387 824 aaPredicted RBP15.87■□□□□ 0.13
AL450442.1-201ENST00000554042 PPP4R3CPQ6ZMV5 832 aa15.85■□□□□ 0.13
AL450442.1-201ENST00000554042 DMRT2Q9Y5R5 561 aa15.66■□□□□ 0.1
AL450442.1-201ENST00000554042 CNKSR2Q8WXI2 1034 aa15.46■□□□□ 0.07
AL450442.1-201ENST00000554042 NCBP3Q53F19 620 aaKnown RBP15.35■□□□□ 0.05
AL450442.1-201ENST00000554042 HOXD11P31277 338 aaPredicted RBP15.23■□□□□ 0.03
AL450442.1-201ENST00000554042 RNF216Q9NWF9 866 aaPredicted RBP15.22■□□□□ 0.03
AL450442.1-201ENST00000554042 KCNA4P22459 653 aa15.17■□□□□ 0.02
AL450442.1-201ENST00000554042 NPM3O75607 178 aaKnown RBP15.12■□□□□ 0.01
AL450442.1-201ENST00000554042 DCAF8L1A6NGE4 600 aa15□□□□□ -0.01
AL450442.1-201ENST00000554042 DNAJC5BQ9UF47 199 aa14.72□□□□□ -0.05
AL450442.1-201ENST00000554042 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.52□□□□□ -0.09
AL450442.1-201ENST00000554042 RNF39Q9H2S5 420 aa14.52□□□□□ -0.09
AL450442.1-201ENST00000554042 SLC4A1APQ9BWU0 796 aaKnown RBP14.39□□□□□ -0.11
AL450442.1-201ENST00000554042 SLC4A2P04920 1241 aa14.36□□□□□ -0.11
AL450442.1-201ENST00000554042 CACNB1Q02641 598 aaPredicted RBP14.35□□□□□ -0.11
AL450442.1-201ENST00000554042 C1QBPQ07021 282 aaKnown RBP14.34□□□□□ -0.11
AL450442.1-201ENST00000554042 U3KPZ7 1027 aaPredicted RBP14.25□□□□□ -0.13
AL450442.1-201ENST00000554042 FOXD4L1Q9NU39 408 aa14.02□□□□□ -0.17
AL450442.1-201ENST00000554042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.98□□□□□ -0.17
AL450442.1-201ENST00000554042 HNRNPUL2Q1KMD3 747 aaKnown RBP13.98□□□□□ -0.17
AL450442.1-201ENST00000554042 MYCNP04198 464 aaPredicted RBP13.97□□□□□ -0.17
AL450442.1-201ENST00000554042 ZBTB22O15209 634 aa13.94□□□□□ -0.18
AL450442.1-201ENST00000554042 SPINK5Q9NQ38 1064 aaPredicted RBP13.94□□□□□ -0.18
AL450442.1-201ENST00000554042 SAMD1Q6SPF0 538 aaPredicted RBP13.91□□□□□ -0.18
AL450442.1-201ENST00000554042 CAPN15O75808 1086 aa13.89□□□□□ -0.19
AL450442.1-201ENST00000554042 EHMT2Q96KQ7 1210 aa13.89□□□□□ -0.19
AL450442.1-201ENST00000554042 APLP2Q06481 763 aa13.88□□□□□ -0.19
AL450442.1-201ENST00000554042 TRHP20396 242 aaPredicted RBP13.77□□□□□ -0.21
AL450442.1-201ENST00000554042 DSG3P32926 999 aa13.73□□□□□ -0.21
AL450442.1-201ENST00000554042 ZNF219Q9P2Y4 722 aaPredicted RBP13.73□□□□□ -0.21
AL450442.1-201ENST00000554042 CSRNP3Q8WYN3 585 aa13.66□□□□□ -0.22
AL450442.1-201ENST00000554042 ATF5Q9Y2D1 282 aaPredicted RBP13.64□□□□□ -0.23
AL450442.1-201ENST00000554042 ABCB7O75027 752 aa13.6□□□□□ -0.23
AL450442.1-201ENST00000554042 ATXN8OSP0DMR3 200 aa13.57□□□□□ -0.24
AL450442.1-201ENST00000554042 POLA2Q14181 598 aa13.49□□□□□ -0.25
AL450442.1-201ENST00000554042 POTEHQ6S545 545 aa13.38□□□□□ -0.27
AL450442.1-201ENST00000554042 ZBTB12Q9Y330 459 aaPredicted RBP13.22□□□□□ -0.29
AL450442.1-201ENST00000554042 FBLN2P98095 1184 aa13.07□□□□□ -0.32
AL450442.1-201ENST00000554042 RBM42Q9BTD8 480 aaKnown RBP13.07□□□□□ -0.32
AL450442.1-201ENST00000554042 MKRN4PQ13434 485 aaPredicted RBP13.03□□□□□ -0.32
AL450442.1-201ENST00000554042 OSCARQ8IYS5 282 aa13.02□□□□□ -0.33
AL450442.1-201ENST00000554042 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
AL450442.1-201ENST00000554042 SPDYE2BA6NHP3 402 aa12.85□□□□□ -0.35
AL450442.1-201ENST00000554042 SPDYE6P0CI01 402 aa12.85□□□□□ -0.35
AL450442.1-201ENST00000554042 SPDYE2Q495Y8 402 aa12.85□□□□□ -0.35
AL450442.1-201ENST00000554042 ZNF692Q9BU19 519 aaPredicted RBP12.77□□□□□ -0.37
AL450442.1-201ENST00000554042 REM2Q8IYK8 340 aaPredicted RBP12.76□□□□□ -0.37
AL450442.1-201ENST00000554042 SSUH2Q9Y2M2 353 aa12.72□□□□□ -0.37
AL450442.1-201ENST00000554042 CHRDL2Q6WN34 429 aa12.65□□□□□ -0.38
AL450442.1-201ENST00000554042 SPDYE4A6NLX3 237 aa12.6□□□□□ -0.39
AL450442.1-201ENST00000554042 PABPN1Q86U42 306 aaKnown RBP eCLIP12.6□□□□□ -0.39
AL450442.1-201ENST00000554042 PITPNM1O00562 1244 aa12.59□□□□□ -0.39
AL450442.1-201ENST00000554042 SPDYE1Q8NFV5 336 aaPredicted RBP12.54□□□□□ -0.4
AL450442.1-201ENST00000554042 CLEC11AQ9Y240 323 aa12.51□□□□□ -0.41
AL450442.1-201ENST00000554042 PIP4P2Q8N4L2 257 aa12.44□□□□□ -0.42
AL450442.1-201ENST00000554042 FXR2P51116 673 aaKnown RBP eCLIP12.42□□□□□ -0.42
AL450442.1-201ENST00000554042 PRR29P0C7W0 189 aa12.36□□□□□ -0.43
AL450442.1-201ENST00000554042 FKBP8Q14318 412 aa12.35□□□□□ -0.43
AL450442.1-201ENST00000554042 PROM2Q8N271 834 aa12.34□□□□□ -0.43
AL450442.1-201ENST00000554042 STAG3Q9UJ98 1225 aa12.33□□□□□ -0.44
AL450442.1-201ENST00000554042 PRKAR2AP13861 404 aaKnown RBP12.29□□□□□ -0.44
AL450442.1-201ENST00000554042 CHADLQ6NUI6 762 aa12.22□□□□□ -0.45
AL450442.1-201ENST00000554042 CREBZFQ9NS37 354 aa12.14□□□□□ -0.47
AL450442.1-201ENST00000554042 HAX1O00165 279 aa12.12□□□□□ -0.47
AL450442.1-201ENST00000554042 FARP1Q9Y4F1 1045 aaPredicted RBP12.09□□□□□ -0.47
AL450442.1-201ENST00000554042 C19orf67A6NJJ6 358 aa12.01□□□□□ -0.49
AL450442.1-201ENST00000554042 EVX2Q03828 476 aa12.01□□□□□ -0.49
AL450442.1-201ENST00000554042 MIER1Q8N108 512 aa12□□□□□ -0.49
AL450442.1-201ENST00000554042 FBXO3Q9UK99 471 aa11.99□□□□□ -0.49
AL450442.1-201ENST00000554042 MNX1P50219 401 aaPredicted RBP11.98□□□□□ -0.49
AL450442.1-201ENST00000554042 SP7Q8TDD2 431 aaPredicted RBP11.95□□□□□ -0.5
AL450442.1-201ENST00000554042 PLEKHG5O94827 1062 aa11.93□□□□□ -0.5
AL450442.1-201ENST00000554042 PLCD3Q8N3E9 789 aa11.93□□□□□ -0.5
AL450442.1-201ENST00000554042 NPM1P06748 294 aaKnown RBP eCLIP11.92□□□□□ -0.5
AL450442.1-201ENST00000554042 CD44P16070 742 aaKnown RBP11.91□□□□□ -0.5
AL450442.1-201ENST00000554042 VASPP50552 380 aaPredicted RBP11.83□□□□□ -0.52
AL450442.1-201ENST00000554042 ZRANB1Q9UGI0 708 aa11.81□□□□□ -0.52
AL450442.1-201ENST00000554042 ZBTB47Q9UFB7 747 aaPredicted RBP11.8□□□□□ -0.52
AL450442.1-201ENST00000554042 PLSCR2Q9NRY7 297 aa11.79□□□□□ -0.52
AL450442.1-201ENST00000554042 PAK3O75914 559 aaPredicted RBP11.78□□□□□ -0.52
AL450442.1-201ENST00000554042 GABBR2O75899 941 aa11.75□□□□□ -0.53
AL450442.1-201ENST00000554042 ZNF579Q8NAF0 562 aaKnown RBP11.74□□□□□ -0.53
AL450442.1-201ENST00000554042 TSPYL2Q9H2G4 693 aaPredicted RBP11.73□□□□□ -0.53
AL450442.1-201ENST00000554042 NUBP1P53384 320 aa11.71□□□□□ -0.53
AL450442.1-201ENST00000554042 RASEFQ8IZ41 740 aa11.71□□□□□ -0.53
AL450442.1-201ENST00000554042 KLHL34Q8N239 644 aa11.7□□□□□ -0.54
AL450442.1-201ENST00000554042 CLCN6P51797 869 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms