RNA–Protein interactions for RNA: ENST00000590719.1

LINC01533-204, Transcript of long intergenic non-protein coding RNA 1533, humanhuman

TSL 5 BASIC

Gene LINC01533, Length 435 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01533-204ENST00000590719 AEBP2Q6ZN18 517 aaPredicted RBP22.5■■□□□ 1.19
LINC01533-204ENST00000590719 CHIC1Q5VXU3 224 aa21.81■■□□□ 1.08
LINC01533-204ENST00000590719 PHF23Q9BUL5 403 aaPredicted RBP19.31■□□□□ 0.68
LINC01533-204ENST00000590719 SENP3Q9H4L4 574 aaPredicted RBP18.85■□□□□ 0.61
LINC01533-204ENST00000590719 FOXD1Q16676 465 aa17.65■□□□□ 0.42
LINC01533-204ENST00000590719 PLPPR3Q6T4P5 718 aa17.6■□□□□ 0.41
LINC01533-204ENST00000590719 PPP6R1Q9UPN7 881 aa17.05■□□□□ 0.32
LINC01533-204ENST00000590719 ADRA2BP18089 450 aa16.99■□□□□ 0.31
LINC01533-204ENST00000590719 PIAS4Q8N2W9 510 aaPredicted RBP16.56■□□□□ 0.24
LINC01533-204ENST00000590719 MSH5O43196 834 aa16.21■□□□□ 0.19
LINC01533-204ENST00000590719 POTEDQ86YR6 584 aa15.93■□□□□ 0.14
LINC01533-204ENST00000590719 PPP4R3CPQ6ZMV5 832 aa15.58■□□□□ 0.08
LINC01533-204ENST00000590719 MAPK8IP2Q13387 824 aaPredicted RBP15.46■□□□□ 0.07
LINC01533-204ENST00000590719 KCNA4P22459 653 aa15.3■□□□□ 0.04
LINC01533-204ENST00000590719 SCAF1Q9H7N4 1312 aaKnown RBP15.24■□□□□ 0.03
LINC01533-204ENST00000590719 NISCHQ9Y2I1 1504 aa15.15■□□□□ 0.02
LINC01533-204ENST00000590719 DMRT2Q9Y5R5 561 aa15.12■□□□□ 0.01
LINC01533-204ENST00000590719 CNKSR2Q8WXI2 1034 aa15.08■□□□□ 0
LINC01533-204ENST00000590719 NPM3O75607 178 aaKnown RBP15□□□□□ -0.01
LINC01533-204ENST00000590719 NCBP3Q53F19 620 aaKnown RBP15□□□□□ -0.01
LINC01533-204ENST00000590719 RNF216Q9NWF9 866 aaPredicted RBP14.8□□□□□ -0.04
LINC01533-204ENST00000590719 HOXD11P31277 338 aaPredicted RBP14.79□□□□□ -0.04
LINC01533-204ENST00000590719 DNAJC5BQ9UF47 199 aa14.47□□□□□ -0.09
LINC01533-204ENST00000590719 SLC4A1APQ9BWU0 796 aaKnown RBP14.45□□□□□ -0.1
LINC01533-204ENST00000590719 DCAF8L1A6NGE4 600 aa14.4□□□□□ -0.1
LINC01533-204ENST00000590719 SLC4A2P04920 1241 aa14.23□□□□□ -0.13
LINC01533-204ENST00000590719 ZBTB22O15209 634 aa14.17□□□□□ -0.14
LINC01533-204ENST00000590719 EHMT2Q96KQ7 1210 aa14.1□□□□□ -0.15
LINC01533-204ENST00000590719 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.02□□□□□ -0.17
LINC01533-204ENST00000590719 CSRNP3Q8WYN3 585 aa13.99□□□□□ -0.17
LINC01533-204ENST00000590719 CACNB1Q02641 598 aaPredicted RBP13.97□□□□□ -0.17
LINC01533-204ENST00000590719 FOXD4L1Q9NU39 408 aa13.96□□□□□ -0.17
LINC01533-204ENST00000590719 U3KPZ7 1027 aaPredicted RBP13.94□□□□□ -0.18
LINC01533-204ENST00000590719 RNF39Q9H2S5 420 aa13.9□□□□□ -0.18
LINC01533-204ENST00000590719 MYCNP04198 464 aaPredicted RBP13.75□□□□□ -0.21
LINC01533-204ENST00000590719 C1QBPQ07021 282 aaKnown RBP13.62□□□□□ -0.23
LINC01533-204ENST00000590719 ATF5Q9Y2D1 282 aaPredicted RBP13.6□□□□□ -0.23
LINC01533-204ENST00000590719 SPINK5Q9NQ38 1064 aaPredicted RBP13.58□□□□□ -0.24
LINC01533-204ENST00000590719 SAMD1Q6SPF0 538 aaPredicted RBP13.5□□□□□ -0.25
LINC01533-204ENST00000590719 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.47□□□□□ -0.25
LINC01533-204ENST00000590719 HNRNPUL2Q1KMD3 747 aaKnown RBP13.47□□□□□ -0.25
LINC01533-204ENST00000590719 ABCC9O60706 1549 aa13.47□□□□□ -0.25
LINC01533-204ENST00000590719 ATXN8OSP0DMR3 200 aa13.4□□□□□ -0.26
LINC01533-204ENST00000590719 CAPN15O75808 1086 aa13.39□□□□□ -0.27
LINC01533-204ENST00000590719 CCDC180Q9P1Z9 1646 aa13.38□□□□□ -0.27
LINC01533-204ENST00000590719 TRHP20396 242 aaPredicted RBP13.35□□□□□ -0.27
LINC01533-204ENST00000590719 APLP2Q06481 763 aa13.29□□□□□ -0.28
LINC01533-204ENST00000590719 DSG3P32926 999 aa13.25□□□□□ -0.29
LINC01533-204ENST00000590719 ZNF219Q9P2Y4 722 aaPredicted RBP13.25□□□□□ -0.29
LINC01533-204ENST00000590719 ABCB7O75027 752 aa13.24□□□□□ -0.29
LINC01533-204ENST00000590719 POLA2Q14181 598 aa13.13□□□□□ -0.31
LINC01533-204ENST00000590719 MKRN4PQ13434 485 aaPredicted RBP12.98□□□□□ -0.33
LINC01533-204ENST00000590719 DCAF8L2P0C7V8 631 aa12.96□□□□□ -0.33
LINC01533-204ENST00000590719 RB1CC1Q8TDY2 1594 aa12.78□□□□□ -0.36
LINC01533-204ENST00000590719 OSCARQ8IYS5 282 aa12.75□□□□□ -0.37
LINC01533-204ENST00000590719 FBLN2P98095 1184 aa12.74□□□□□ -0.37
LINC01533-204ENST00000590719 ZBTB12Q9Y330 459 aaPredicted RBP12.74□□□□□ -0.37
LINC01533-204ENST00000590719 NACADO15069 1562 aa12.73□□□□□ -0.37
LINC01533-204ENST00000590719 PABPN1Q86U42 306 aaKnown RBP eCLIP12.67□□□□□ -0.38
LINC01533-204ENST00000590719 MYO15BQ96JP2 1530 aa12.59□□□□□ -0.39
LINC01533-204ENST00000590719 FKBP8Q14318 412 aa12.57□□□□□ -0.4
LINC01533-204ENST00000590719 ZCCHC6Q5VYS8 1495 aaKnown RBP12.54□□□□□ -0.4
LINC01533-204ENST00000590719 SPDYE4A6NLX3 237 aa12.53□□□□□ -0.4
LINC01533-204ENST00000590719 SPDYE2BA6NHP3 402 aa12.5□□□□□ -0.41
LINC01533-204ENST00000590719 SPDYE6P0CI01 402 aa12.5□□□□□ -0.41
LINC01533-204ENST00000590719 SPDYE2Q495Y8 402 aa12.5□□□□□ -0.41
LINC01533-204ENST00000590719 SSUH2Q9Y2M2 353 aa12.49□□□□□ -0.41
LINC01533-204ENST00000590719 DCAF1Q9Y4B6 1507 aa12.47□□□□□ -0.41
LINC01533-204ENST00000590719 POTEHQ6S545 545 aa12.47□□□□□ -0.41
LINC01533-204ENST00000590719 ZNF692Q9BU19 519 aaPredicted RBP12.46□□□□□ -0.41
LINC01533-204ENST00000590719 RBM42Q9BTD8 480 aaKnown RBP12.43□□□□□ -0.42
LINC01533-204ENST00000590719 PROM2Q8N271 834 aa12.4□□□□□ -0.42
LINC01533-204ENST00000590719 BICRAQ9NZM4 1560 aa12.39□□□□□ -0.43
LINC01533-204ENST00000590719 AKT1S1Q96B36 256 aa12.35□□□□□ -0.43
LINC01533-204ENST00000590719 UNC13AQ9UPW8 1703 aa12.32□□□□□ -0.44
LINC01533-204ENST00000590719 REM2Q8IYK8 340 aaPredicted RBP12.31□□□□□ -0.44
LINC01533-204ENST00000590719 SCRIBQ14160 1630 aa12.3□□□□□ -0.44
LINC01533-204ENST00000590719 SHROOM4Q9ULL8 1493 aa12.23□□□□□ -0.45
LINC01533-204ENST00000590719 PITPNM1O00562 1244 aa12.21□□□□□ -0.45
LINC01533-204ENST00000590719 CHRDL2Q6WN34 429 aa12.12□□□□□ -0.47
LINC01533-204ENST00000590719 CECR2Q9BXF3 1484 aa12.12□□□□□ -0.47
LINC01533-204ENST00000590719 CLEC11AQ9Y240 323 aa12.11□□□□□ -0.47
LINC01533-204ENST00000590719 EIF4G1Q04637 1599 aaKnown RBP12.1□□□□□ -0.47
LINC01533-204ENST00000590719 SPDYE1Q8NFV5 336 aaPredicted RBP12.1□□□□□ -0.47
LINC01533-204ENST00000590719 CC2D2AQ9P2K1 1620 aa12.08□□□□□ -0.48
LINC01533-204ENST00000590719 STAG3Q9UJ98 1225 aa11.97□□□□□ -0.49
LINC01533-204ENST00000590719 FXR2P51116 673 aaKnown RBP eCLIP11.96□□□□□ -0.49
LINC01533-204ENST00000590719 PRR29P0C7W0 189 aa11.95□□□□□ -0.5
LINC01533-204ENST00000590719 VASPP50552 380 aaPredicted RBP11.95□□□□□ -0.5
LINC01533-204ENST00000590719 PIP4P2Q8N4L2 257 aa11.95□□□□□ -0.5
LINC01533-204ENST00000590719 CREBZFQ9NS37 354 aa11.94□□□□□ -0.5
LINC01533-204ENST00000590719 FBXO3Q9UK99 471 aa11.94□□□□□ -0.5
LINC01533-204ENST00000590719 CHADLQ6NUI6 762 aa11.93□□□□□ -0.5
LINC01533-204ENST00000590719 PRKAR2AP13861 404 aaKnown RBP11.85□□□□□ -0.51
LINC01533-204ENST00000590719 MNX1P50219 401 aaPredicted RBP11.85□□□□□ -0.51
LINC01533-204ENST00000590719 IFNLR1Q8IU57 520 aaPredicted RBP11.85□□□□□ -0.51
LINC01533-204ENST00000590719 MIER1Q8N108 512 aa11.83□□□□□ -0.52
LINC01533-204ENST00000590719 NCAPD3P42695 1498 aa11.83□□□□□ -0.52
LINC01533-204ENST00000590719 ATAD2BQ9ULI0 1458 aa11.8□□□□□ -0.52
LINC01533-204ENST00000590719 PLCD3Q8N3E9 789 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms