RNA–Protein interactions for RNA: ENST00000568432.1

TMEM87A-212, Transcript of transmembrane protein 87A, humanhuman

TSL 3 BASIC

Gene TMEM87A, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-212ENST00000568432 AEBP2Q6ZN18 517 aaPredicted RBP23.15■■□□□ 1.3
TMEM87A-212ENST00000568432 CHIC1Q5VXU3 224 aa22.12■■□□□ 1.13
TMEM87A-212ENST00000568432 SENP3Q9H4L4 574 aaPredicted RBP19.81■□□□□ 0.76
TMEM87A-212ENST00000568432 PHF23Q9BUL5 403 aaPredicted RBP19.48■□□□□ 0.71
TMEM87A-212ENST00000568432 FOXD1Q16676 465 aa18.54■□□□□ 0.56
TMEM87A-212ENST00000568432 POTEDQ86YR6 584 aa17.97■□□□□ 0.47
TMEM87A-212ENST00000568432 PLPPR3Q6T4P5 718 aa17.86■□□□□ 0.45
TMEM87A-212ENST00000568432 MSH5O43196 834 aa17.52■□□□□ 0.4
TMEM87A-212ENST00000568432 PPP6R1Q9UPN7 881 aa17.27■□□□□ 0.36
TMEM87A-212ENST00000568432 ADRA2BP18089 450 aa17.23■□□□□ 0.35
TMEM87A-212ENST00000568432 PIAS4Q8N2W9 510 aaPredicted RBP17.2■□□□□ 0.34
TMEM87A-212ENST00000568432 PPP4R3CPQ6ZMV5 832 aa15.75■□□□□ 0.11
TMEM87A-212ENST00000568432 MAPK8IP2Q13387 824 aaPredicted RBP15.72■□□□□ 0.11
TMEM87A-212ENST00000568432 SCAF1Q9H7N4 1312 aaKnown RBP15.7■□□□□ 0.1
TMEM87A-212ENST00000568432 DMRT2Q9Y5R5 561 aa15.63■□□□□ 0.09
TMEM87A-212ENST00000568432 CACNB1Q02641 598 aaPredicted RBP15.35■□□□□ 0.05
TMEM87A-212ENST00000568432 CNKSR2Q8WXI2 1034 aa15.32■□□□□ 0.04
TMEM87A-212ENST00000568432 NCBP3Q53F19 620 aaKnown RBP15.24■□□□□ 0.03
TMEM87A-212ENST00000568432 KCNA4P22459 653 aa15.17■□□□□ 0.02
TMEM87A-212ENST00000568432 RNF216Q9NWF9 866 aaPredicted RBP15.07■□□□□ 0
TMEM87A-212ENST00000568432 NPM3O75607 178 aaKnown RBP15.06■□□□□ 0
TMEM87A-212ENST00000568432 HOXD11P31277 338 aaPredicted RBP15.06■□□□□ 0
TMEM87A-212ENST00000568432 DCAF8L1A6NGE4 600 aa15.03■□□□□ -0
TMEM87A-212ENST00000568432 RNF39Q9H2S5 420 aa14.91□□□□□ -0.02
TMEM87A-212ENST00000568432 C1QBPQ07021 282 aaKnown RBP14.65□□□□□ -0.06
TMEM87A-212ENST00000568432 DNAJC5BQ9UF47 199 aa14.58□□□□□ -0.08
TMEM87A-212ENST00000568432 SLC4A1APQ9BWU0 796 aaKnown RBP14.4□□□□□ -0.1
TMEM87A-212ENST00000568432 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.37□□□□□ -0.11
TMEM87A-212ENST00000568432 SLC4A2P04920 1241 aa14.28□□□□□ -0.12
TMEM87A-212ENST00000568432 U3KPZ7 1027 aaPredicted RBP14.12□□□□□ -0.15
TMEM87A-212ENST00000568432 POTEHQ6S545 545 aa13.98□□□□□ -0.17
TMEM87A-212ENST00000568432 FOXD4L1Q9NU39 408 aa13.98□□□□□ -0.17
TMEM87A-212ENST00000568432 ZBTB22O15209 634 aa13.97□□□□□ -0.17
TMEM87A-212ENST00000568432 MYCNP04198 464 aaPredicted RBP13.88□□□□□ -0.19
TMEM87A-212ENST00000568432 SPINK5Q9NQ38 1064 aaPredicted RBP13.83□□□□□ -0.2
TMEM87A-212ENST00000568432 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.81□□□□□ -0.2
TMEM87A-212ENST00000568432 HNRNPUL2Q1KMD3 747 aaKnown RBP13.81□□□□□ -0.2
TMEM87A-212ENST00000568432 DSG3P32926 999 aa13.8□□□□□ -0.2
TMEM87A-212ENST00000568432 EHMT2Q96KQ7 1210 aa13.79□□□□□ -0.2
TMEM87A-212ENST00000568432 CAPN15O75808 1086 aa13.78□□□□□ -0.2
TMEM87A-212ENST00000568432 SAMD1Q6SPF0 538 aaPredicted RBP13.77□□□□□ -0.21
TMEM87A-212ENST00000568432 CSRNP3Q8WYN3 585 aa13.73□□□□□ -0.21
TMEM87A-212ENST00000568432 APLP2Q06481 763 aa13.7□□□□□ -0.22
TMEM87A-212ENST00000568432 TRHP20396 242 aaPredicted RBP13.64□□□□□ -0.23
TMEM87A-212ENST00000568432 ATF5Q9Y2D1 282 aaPredicted RBP13.6□□□□□ -0.23
TMEM87A-212ENST00000568432 ZNF219Q9P2Y4 722 aaPredicted RBP13.57□□□□□ -0.24
TMEM87A-212ENST00000568432 ATXN8OSP0DMR3 200 aa13.5□□□□□ -0.25
TMEM87A-212ENST00000568432 ABCB7O75027 752 aa13.48□□□□□ -0.25
TMEM87A-212ENST00000568432 POLA2Q14181 598 aa13.38□□□□□ -0.27
TMEM87A-212ENST00000568432 RBM42Q9BTD8 480 aaKnown RBP13.17□□□□□ -0.3
TMEM87A-212ENST00000568432 CHRDL2Q6WN34 429 aa13.09□□□□□ -0.31
TMEM87A-212ENST00000568432 ZBTB12Q9Y330 459 aaPredicted RBP13.06□□□□□ -0.32
TMEM87A-212ENST00000568432 MKRN4PQ13434 485 aaPredicted RBP12.97□□□□□ -0.33
TMEM87A-212ENST00000568432 FBLN2P98095 1184 aa12.96□□□□□ -0.33
TMEM87A-212ENST00000568432 OSCARQ8IYS5 282 aa12.91□□□□□ -0.34
TMEM87A-212ENST00000568432 SP7Q8TDD2 431 aaPredicted RBP12.87□□□□□ -0.35
TMEM87A-212ENST00000568432 AKT1S1Q96B36 256 aa12.77□□□□□ -0.37
TMEM87A-212ENST00000568432 SPDYE2BA6NHP3 402 aa12.72□□□□□ -0.37
TMEM87A-212ENST00000568432 SPDYE6P0CI01 402 aa12.72□□□□□ -0.37
TMEM87A-212ENST00000568432 SPDYE2Q495Y8 402 aa12.72□□□□□ -0.37
TMEM87A-212ENST00000568432 PIP4P2Q8N4L2 257 aa12.68□□□□□ -0.38
TMEM87A-212ENST00000568432 ZNF692Q9BU19 519 aaPredicted RBP12.68□□□□□ -0.38
TMEM87A-212ENST00000568432 REM2Q8IYK8 340 aaPredicted RBP12.67□□□□□ -0.38
TMEM87A-212ENST00000568432 SSUH2Q9Y2M2 353 aa12.61□□□□□ -0.39
TMEM87A-212ENST00000568432 HAX1O00165 279 aa12.58□□□□□ -0.4
TMEM87A-212ENST00000568432 SPDYE4A6NLX3 237 aa12.57□□□□□ -0.4
TMEM87A-212ENST00000568432 PITPNM1O00562 1244 aa12.54□□□□□ -0.4
TMEM87A-212ENST00000568432 FXR2P51116 673 aaKnown RBP eCLIP12.51□□□□□ -0.41
TMEM87A-212ENST00000568432 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
TMEM87A-212ENST00000568432 FKBP8Q14318 412 aa12.41□□□□□ -0.42
TMEM87A-212ENST00000568432 EVX2Q03828 476 aa12.4□□□□□ -0.42
TMEM87A-212ENST00000568432 SPDYE1Q8NFV5 336 aaPredicted RBP12.4□□□□□ -0.42
TMEM87A-212ENST00000568432 CLEC11AQ9Y240 323 aa12.4□□□□□ -0.42
TMEM87A-212ENST00000568432 PROM2Q8N271 834 aa12.31□□□□□ -0.44
TMEM87A-212ENST00000568432 PRR29P0C7W0 189 aa12.24□□□□□ -0.45
TMEM87A-212ENST00000568432 STAG3Q9UJ98 1225 aa12.22□□□□□ -0.45
TMEM87A-212ENST00000568432 PRKAR2AP13861 404 aaKnown RBP12.2□□□□□ -0.46
TMEM87A-212ENST00000568432 C19orf67A6NJJ6 358 aa12.14□□□□□ -0.47
TMEM87A-212ENST00000568432 CHADLQ6NUI6 762 aa12.13□□□□□ -0.47
TMEM87A-212ENST00000568432 GABBR2O75899 941 aa12.08□□□□□ -0.48
TMEM87A-212ENST00000568432 LHX8Q68G74 356 aa12.06□□□□□ -0.48
TMEM87A-212ENST00000568432 CREBZFQ9NS37 354 aa12.05□□□□□ -0.48
TMEM87A-212ENST00000568432 FBXO3Q9UK99 471 aa11.98□□□□□ -0.49
TMEM87A-212ENST00000568432 MIER1Q8N108 512 aa11.96□□□□□ -0.49
TMEM87A-212ENST00000568432 FARP1Q9Y4F1 1045 aaPredicted RBP11.96□□□□□ -0.49
TMEM87A-212ENST00000568432 MNX1P50219 401 aaPredicted RBP11.9□□□□□ -0.5
TMEM87A-212ENST00000568432 PLCD3Q8N3E9 789 aa11.9□□□□□ -0.5
TMEM87A-212ENST00000568432 PLEKHG5O94827 1062 aa11.85□□□□□ -0.51
TMEM87A-212ENST00000568432 VASPP50552 380 aaPredicted RBP11.84□□□□□ -0.51
TMEM87A-212ENST00000568432 POTEIP0CG38 1075 aa11.83□□□□□ -0.52
TMEM87A-212ENST00000568432 NPM1P06748 294 aaKnown RBP eCLIP11.82□□□□□ -0.52
TMEM87A-212ENST00000568432 CD44P16070 742 aaKnown RBP11.81□□□□□ -0.52
TMEM87A-212ENST00000568432 ZBTB47Q9UFB7 747 aaPredicted RBP11.73□□□□□ -0.53
TMEM87A-212ENST00000568432 KLHL34Q8N239 644 aa11.71□□□□□ -0.53
TMEM87A-212ENST00000568432 PLSCR2Q9NRY7 297 aa11.71□□□□□ -0.53
TMEM87A-212ENST00000568432 IFNLR1Q8IU57 520 aaPredicted RBP11.7□□□□□ -0.54
TMEM87A-212ENST00000568432 CLCN6P51797 869 aa11.69□□□□□ -0.54
TMEM87A-212ENST00000568432 ZRANB1Q9UGI0 708 aa11.69□□□□□ -0.54
TMEM87A-212ENST00000568432 NUBP1P53384 320 aa11.67□□□□□ -0.54
TMEM87A-212ENST00000568432 RASEFQ8IZ41 740 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms