RNA–Protein interactions for RNA: ENST00000599409.5

LINC01515-209, Transcript of long intergenic non-protein coding RNA 1515, humanhuman

TSL 5 BASIC

Gene LINC01515, Length 755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01515-209ENST00000599409 AEBP2Q6ZN18 517 aaPredicted RBP22■■□□□ 1.11
LINC01515-209ENST00000599409 CHIC1Q5VXU3 224 aa20.54■□□□□ 0.88
LINC01515-209ENST00000599409 SENP3Q9H4L4 574 aaPredicted RBP18.9■□□□□ 0.62
LINC01515-209ENST00000599409 PHF23Q9BUL5 403 aaPredicted RBP18.51■□□□□ 0.55
LINC01515-209ENST00000599409 NISCHQ9Y2I1 1504 aa18.39■□□□□ 0.53
LINC01515-209ENST00000599409 POTEDQ86YR6 584 aa17.71■□□□□ 0.43
LINC01515-209ENST00000599409 FOXD1Q16676 465 aa17.69■□□□□ 0.42
LINC01515-209ENST00000599409 MSH5O43196 834 aa16.87■□□□□ 0.29
LINC01515-209ENST00000599409 PIAS4Q8N2W9 510 aaPredicted RBP16.3■□□□□ 0.2
LINC01515-209ENST00000599409 CCDC180Q9P1Z9 1646 aa16.11■□□□□ 0.17
LINC01515-209ENST00000599409 PPP6R1Q9UPN7 881 aa15.95■□□□□ 0.14
LINC01515-209ENST00000599409 ADRA2BP18089 450 aa15.81■□□□□ 0.12
LINC01515-209ENST00000599409 PLPPR3Q6T4P5 718 aa15.77■□□□□ 0.12
LINC01515-209ENST00000599409 ABCC9O60706 1549 aa15.59■□□□□ 0.09
LINC01515-209ENST00000599409 DCAF8L2P0C7V8 631 aa15.38■□□□□ 0.05
LINC01515-209ENST00000599409 ZCCHC6Q5VYS8 1495 aaKnown RBP15.35■□□□□ 0.05
LINC01515-209ENST00000599409 DCAF1Q9Y4B6 1507 aa15.2■□□□□ 0.02
LINC01515-209ENST00000599409 MYO15BQ96JP2 1530 aa15.16■□□□□ 0.02
LINC01515-209ENST00000599409 NACADO15069 1562 aa15.15■□□□□ 0.02
LINC01515-209ENST00000599409 RB1CC1Q8TDY2 1594 aa15.07■□□□□ 0
LINC01515-209ENST00000599409 DMRT2Q9Y5R5 561 aa14.89□□□□□ -0.03
LINC01515-209ENST00000599409 CACNB1Q02641 598 aaPredicted RBP14.85□□□□□ -0.03
LINC01515-209ENST00000599409 SHROOM4Q9ULL8 1493 aa14.77□□□□□ -0.04
LINC01515-209ENST00000599409 SCRIBQ14160 1630 aa14.77□□□□□ -0.05
LINC01515-209ENST00000599409 MAPK8IP2Q13387 824 aaPredicted RBP14.74□□□□□ -0.05
LINC01515-209ENST00000599409 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
LINC01515-209ENST00000599409 UNC13AQ9UPW8 1703 aa14.67□□□□□ -0.06
LINC01515-209ENST00000599409 BICRAQ9NZM4 1560 aa14.62□□□□□ -0.07
LINC01515-209ENST00000599409 SCAF1Q9H7N4 1312 aaKnown RBP14.51□□□□□ -0.09
LINC01515-209ENST00000599409 CECR2Q9BXF3 1484 aa14.33□□□□□ -0.12
LINC01515-209ENST00000599409 RNF39Q9H2S5 420 aa14.33□□□□□ -0.12
LINC01515-209ENST00000599409 EIF4G1Q04637 1599 aaKnown RBP14.2□□□□□ -0.14
LINC01515-209ENST00000599409 BAZ1AQ9NRL2 1556 aaPredicted RBP14.2□□□□□ -0.14
LINC01515-209ENST00000599409 MROH2BQ7Z745 1585 aa14.18□□□□□ -0.14
LINC01515-209ENST00000599409 RSF1Q96T23 1441 aaPredicted RBP14.16□□□□□ -0.14
LINC01515-209ENST00000599409 SMARCA4P51532 1647 aa14.15□□□□□ -0.14
LINC01515-209ENST00000599409 DNAJC5BQ9UF47 199 aa14.15□□□□□ -0.14
LINC01515-209ENST00000599409 DCAF8L1A6NGE4 600 aa14.14□□□□□ -0.15
LINC01515-209ENST00000599409 SUPT5HO00267 1087 aaKnown RBP14.1□□□□□ -0.15
LINC01515-209ENST00000599409 C1QBPQ07021 282 aaKnown RBP14.09□□□□□ -0.15
LINC01515-209ENST00000599409 CC2D2AQ9P2K1 1620 aa14.08□□□□□ -0.16
LINC01515-209ENST00000599409 ATAD2BQ9ULI0 1458 aa14.07□□□□□ -0.16
LINC01515-209ENST00000599409 HOXD11P31277 338 aaPredicted RBP14.07□□□□□ -0.16
LINC01515-209ENST00000599409 NCAPD3P42695 1498 aa14.03□□□□□ -0.16
LINC01515-209ENST00000599409 PEG3Q9GZU2 1588 aa14.02□□□□□ -0.16
LINC01515-209ENST00000599409 WIZO95785 1651 aa14.01□□□□□ -0.17
LINC01515-209ENST00000599409 SMARCA2P51531 1590 aa14.01□□□□□ -0.17
LINC01515-209ENST00000599409 BAZ1BQ9UIG0 1483 aaKnown RBP13.94□□□□□ -0.18
LINC01515-209ENST00000599409 HMGXB3Q12766 1538 aa13.9□□□□□ -0.18
LINC01515-209ENST00000599409 TOP2AP11388 1531 aaKnown RBP13.87□□□□□ -0.19
LINC01515-209ENST00000599409 CCDC88BA6NC98 1476 aa13.78□□□□□ -0.2
LINC01515-209ENST00000599409 RNF216Q9NWF9 866 aaPredicted RBP13.74□□□□□ -0.21
LINC01515-209ENST00000599409 POTEHQ6S545 545 aa13.72□□□□□ -0.21
LINC01515-209ENST00000599409 PPP4R3CPQ6ZMV5 832 aa13.7□□□□□ -0.22
LINC01515-209ENST00000599409 CADPSQ9ULU8 1353 aa13.66□□□□□ -0.22
LINC01515-209ENST00000599409 CNKSR2Q8WXI2 1034 aa13.64□□□□□ -0.23
LINC01515-209ENST00000599409 CFTRP13569 1480 aa13.6□□□□□ -0.23
LINC01515-209ENST00000599409 NESP48681 1621 aa13.58□□□□□ -0.24
LINC01515-209ENST00000599409 LAMC3Q9Y6N6 1575 aa13.54□□□□□ -0.24
LINC01515-209ENST00000599409 PDS5BQ9NTI5 1447 aa13.5□□□□□ -0.25
LINC01515-209ENST00000599409 FANCD2Q9BXW9 1451 aa13.45□□□□□ -0.26
LINC01515-209ENST00000599409 ERCC6Q03468 1493 aa13.39□□□□□ -0.27
LINC01515-209ENST00000599409 CEP164Q9UPV0 1460 aa13.38□□□□□ -0.27
LINC01515-209ENST00000599409 PRDM2Q13029 1718 aa13.37□□□□□ -0.27
LINC01515-209ENST00000599409 KIF21AQ7Z4S6 1674 aa13.34□□□□□ -0.27
LINC01515-209ENST00000599409 WRNQ14191 1432 aaPredicted RBP eCLIP13.32□□□□□ -0.28
LINC01515-209ENST00000599409 ABCC8Q09428 1581 aa13.32□□□□□ -0.28
LINC01515-209ENST00000599409 TRIM41Q8WV44 630 aa13.31□□□□□ -0.28
LINC01515-209ENST00000599409 MRC2Q9UBG0 1479 aa13.3□□□□□ -0.28
LINC01515-209ENST00000599409 URB2Q14146 1524 aaKnown RBP13.29□□□□□ -0.28
LINC01515-209ENST00000599409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.28□□□□□ -0.28
LINC01515-209ENST00000599409 CUX1P39880 1505 aa13.28□□□□□ -0.28
LINC01515-209ENST00000599409 TOPBP1Q92547 1522 aa13.27□□□□□ -0.29
LINC01515-209ENST00000599409 DNMBPQ6XZF7 1577 aa13.24□□□□□ -0.29
LINC01515-209ENST00000599409 THOC2Q8NI27 1593 aaKnown RBP13.23□□□□□ -0.29
LINC01515-209ENST00000599409 WDR62O43379 1518 aa13.23□□□□□ -0.29
LINC01515-209ENST00000599409 SYNJ1O43426 1573 aa13.22□□□□□ -0.29
LINC01515-209ENST00000599409 TOP2BQ02880 1626 aa13.21□□□□□ -0.3
LINC01515-209ENST00000599409 SOGA1O94964 1423 aa13.19□□□□□ -0.3
LINC01515-209ENST00000599409 FGD5Q6ZNL6 1462 aa13.18□□□□□ -0.3
LINC01515-209ENST00000599409 BIVM-ERCC5R4GMW8 1640 aa13.18□□□□□ -0.3
LINC01515-209ENST00000599409 POLA1P09884 1462 aaPredicted RBP13.16□□□□□ -0.3
LINC01515-209ENST00000599409 CUX2O14529 1486 aa13.15□□□□□ -0.3
LINC01515-209ENST00000599409 RAD54L2Q9Y4B4 1467 aa13.15□□□□□ -0.3
LINC01515-209ENST00000599409 DSG3P32926 999 aa13.14□□□□□ -0.31
LINC01515-209ENST00000599409 IFT140Q96RY7 1462 aa13.1□□□□□ -0.31
LINC01515-209ENST00000599409 ABCA10Q8WWZ4 1543 aa13.08□□□□□ -0.32
LINC01515-209ENST00000599409 TDRD9Q8NDG6 1382 aaKnown RBP13.07□□□□□ -0.32
LINC01515-209ENST00000599409 TARBP1Q13395 1621 aaKnown RBP13.06□□□□□ -0.32
LINC01515-209ENST00000599409 ZNF608Q9ULD9 1512 aaPredicted RBP13.04□□□□□ -0.32
LINC01515-209ENST00000599409 AQRO60306 1485 aaKnown RBP eCLIP13.04□□□□□ -0.32
LINC01515-209ENST00000599409 RUSC2Q8N2Y8 1516 aa13.03□□□□□ -0.32
LINC01515-209ENST00000599409 FAM9AQ8IZU1 332 aaPredicted RBP13.03□□□□□ -0.32
LINC01515-209ENST00000599409 KIF27Q86VH2 1401 aa13.03□□□□□ -0.32
LINC01515-209ENST00000599409 IGF1RP08069 1367 aa13□□□□□ -0.33
LINC01515-209ENST00000599409 CSRNP3Q8WYN3 585 aa13□□□□□ -0.33
LINC01515-209ENST00000599409 GAPVD1Q14C86 1478 aa12.99□□□□□ -0.33
LINC01515-209ENST00000599409 SPINK5Q9NQ38 1064 aaPredicted RBP12.98□□□□□ -0.33
LINC01515-209ENST00000599409 U3KPZ7 1027 aaPredicted RBP12.98□□□□□ -0.33
LINC01515-209ENST00000599409 WDR97A6NE52 1622 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms