RNA–Protein interactions for RNA: ENST00000515882.1

SLIT2-IT1-201, SLIT2 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene SLIT2-IT1, Length 601 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-IT1-201ENST00000515882 AEBP2Q6ZN18 517 aaPredicted RBP25.41■■□□□ 1.66
SLIT2-IT1-201ENST00000515882 CHIC1Q5VXU3 224 aa23.85■■□□□ 1.41
SLIT2-IT1-201ENST00000515882 SENP3Q9H4L4 574 aaPredicted RBP21.82■■□□□ 1.08
SLIT2-IT1-201ENST00000515882 PHF23Q9BUL5 403 aaPredicted RBP21.45■■□□□ 1.02
SLIT2-IT1-201ENST00000515882 FOXD1Q16676 465 aa20.32■□□□□ 0.84
SLIT2-IT1-201ENST00000515882 POTEDQ86YR6 584 aa19.32■□□□□ 0.68
SLIT2-IT1-201ENST00000515882 MSH5O43196 834 aa19.24■□□□□ 0.67
SLIT2-IT1-201ENST00000515882 PLPPR3Q6T4P5 718 aa18.92■□□□□ 0.62
SLIT2-IT1-201ENST00000515882 PIAS4Q8N2W9 510 aaPredicted RBP18.9■□□□□ 0.62
SLIT2-IT1-201ENST00000515882 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
SLIT2-IT1-201ENST00000515882 ADRA2BP18089 450 aa18.6■□□□□ 0.57
SLIT2-IT1-201ENST00000515882 DMRT2Q9Y5R5 561 aa17.24■□□□□ 0.35
SLIT2-IT1-201ENST00000515882 MAPK8IP2Q13387 824 aaPredicted RBP17.18■□□□□ 0.34
SLIT2-IT1-201ENST00000515882 SCAF1Q9H7N4 1312 aaKnown RBP17.16■□□□□ 0.34
SLIT2-IT1-201ENST00000515882 CACNB1Q02641 598 aaPredicted RBP16.67■□□□□ 0.26
SLIT2-IT1-201ENST00000515882 PPP4R3CPQ6ZMV5 832 aa16.5■□□□□ 0.23
SLIT2-IT1-201ENST00000515882 HOXD11P31277 338 aaPredicted RBP16.48■□□□□ 0.23
SLIT2-IT1-201ENST00000515882 DCAF8L1A6NGE4 600 aa16.47■□□□□ 0.23
SLIT2-IT1-201ENST00000515882 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
SLIT2-IT1-201ENST00000515882 CNKSR2Q8WXI2 1034 aa16.31■□□□□ 0.2
SLIT2-IT1-201ENST00000515882 RNF216Q9NWF9 866 aaPredicted RBP16.26■□□□□ 0.19
SLIT2-IT1-201ENST00000515882 C1QBPQ07021 282 aaKnown RBP16.12■□□□□ 0.17
SLIT2-IT1-201ENST00000515882 DNAJC5BQ9UF47 199 aa16.07■□□□□ 0.16
SLIT2-IT1-201ENST00000515882 NCBP3Q53F19 620 aaKnown RBP15.81■□□□□ 0.12
SLIT2-IT1-201ENST00000515882 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.65■□□□□ 0.1
SLIT2-IT1-201ENST00000515882 NPM3O75607 178 aaKnown RBP15.51■□□□□ 0.07
SLIT2-IT1-201ENST00000515882 U3KPZ7 1027 aaPredicted RBP15.28■□□□□ 0.04
SLIT2-IT1-201ENST00000515882 DSG3P32926 999 aa15.17■□□□□ 0.02
SLIT2-IT1-201ENST00000515882 CAPN15O75808 1086 aa15.15■□□□□ 0.02
SLIT2-IT1-201ENST00000515882 SPINK5Q9NQ38 1064 aaPredicted RBP15.13■□□□□ 0.01
SLIT2-IT1-201ENST00000515882 POTEHQ6S545 545 aa15.08■□□□□ 0
SLIT2-IT1-201ENST00000515882 APLP2Q06481 763 aa14.93□□□□□ -0.02
SLIT2-IT1-201ENST00000515882 SLC4A2P04920 1241 aa14.9□□□□□ -0.02
SLIT2-IT1-201ENST00000515882 KCNA4P22459 653 aa14.86□□□□□ -0.03
SLIT2-IT1-201ENST00000515882 ZNF219Q9P2Y4 722 aaPredicted RBP14.85□□□□□ -0.03
SLIT2-IT1-201ENST00000515882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.81□□□□□ -0.04
SLIT2-IT1-201ENST00000515882 TRHP20396 242 aaPredicted RBP14.81□□□□□ -0.04
SLIT2-IT1-201ENST00000515882 HNRNPUL2Q1KMD3 747 aaKnown RBP14.81□□□□□ -0.04
SLIT2-IT1-201ENST00000515882 ABCB7O75027 752 aa14.72□□□□□ -0.05
SLIT2-IT1-201ENST00000515882 SAMD1Q6SPF0 538 aaPredicted RBP14.69□□□□□ -0.06
SLIT2-IT1-201ENST00000515882 RBM42Q9BTD8 480 aaKnown RBP14.55□□□□□ -0.08
SLIT2-IT1-201ENST00000515882 MYCNP04198 464 aaPredicted RBP14.39□□□□□ -0.11
SLIT2-IT1-201ENST00000515882 POLA2Q14181 598 aa14.35□□□□□ -0.11
SLIT2-IT1-201ENST00000515882 CHRDL2Q6WN34 429 aa14.32□□□□□ -0.12
SLIT2-IT1-201ENST00000515882 AKT1S1Q96B36 256 aa14.12□□□□□ -0.15
SLIT2-IT1-201ENST00000515882 ZBTB12Q9Y330 459 aaPredicted RBP14.11□□□□□ -0.15
SLIT2-IT1-201ENST00000515882 FOXD4L1Q9NU39 408 aa14.04□□□□□ -0.16
SLIT2-IT1-201ENST00000515882 ATF5Q9Y2D1 282 aaPredicted RBP14.01□□□□□ -0.17
SLIT2-IT1-201ENST00000515882 SLC4A1APQ9BWU0 796 aaKnown RBP13.99□□□□□ -0.17
SLIT2-IT1-201ENST00000515882 SP7Q8TDD2 431 aaPredicted RBP13.98□□□□□ -0.17
SLIT2-IT1-201ENST00000515882 REM2Q8IYK8 340 aaPredicted RBP13.94□□□□□ -0.18
SLIT2-IT1-201ENST00000515882 PIP4P2Q8N4L2 257 aa13.88□□□□□ -0.19
SLIT2-IT1-201ENST00000515882 OSCARQ8IYS5 282 aa13.87□□□□□ -0.19
SLIT2-IT1-201ENST00000515882 PITPNM1O00562 1244 aa13.78□□□□□ -0.2
SLIT2-IT1-201ENST00000515882 FXR2P51116 673 aaKnown RBP eCLIP13.78□□□□□ -0.2
SLIT2-IT1-201ENST00000515882 HAX1O00165 279 aa13.73□□□□□ -0.21
SLIT2-IT1-201ENST00000515882 ATXN8OSP0DMR3 200 aa13.71□□□□□ -0.21
SLIT2-IT1-201ENST00000515882 SPDYE2BA6NHP3 402 aa13.62□□□□□ -0.23
SLIT2-IT1-201ENST00000515882 ZBTB22O15209 634 aa13.62□□□□□ -0.23
SLIT2-IT1-201ENST00000515882 SPDYE6P0CI01 402 aa13.62□□□□□ -0.23
SLIT2-IT1-201ENST00000515882 SPDYE2Q495Y8 402 aa13.62□□□□□ -0.23
SLIT2-IT1-201ENST00000515882 FBLN2P98095 1184 aa13.58□□□□□ -0.24
SLIT2-IT1-201ENST00000515882 EVX2Q03828 476 aa13.49□□□□□ -0.25
SLIT2-IT1-201ENST00000515882 SPDYE1Q8NFV5 336 aaPredicted RBP13.47□□□□□ -0.25
SLIT2-IT1-201ENST00000515882 PRKAR2AP13861 404 aaKnown RBP13.43□□□□□ -0.26
SLIT2-IT1-201ENST00000515882 CLEC11AQ9Y240 323 aa13.4□□□□□ -0.26
SLIT2-IT1-201ENST00000515882 SSUH2Q9Y2M2 353 aa13.38□□□□□ -0.27
SLIT2-IT1-201ENST00000515882 ZNF692Q9BU19 519 aaPredicted RBP13.37□□□□□ -0.27
SLIT2-IT1-201ENST00000515882 MKRN4PQ13434 485 aaPredicted RBP13.36□□□□□ -0.27
SLIT2-IT1-201ENST00000515882 C19orf67A6NJJ6 358 aa13.34□□□□□ -0.27
SLIT2-IT1-201ENST00000515882 GABBR2O75899 941 aa13.22□□□□□ -0.29
SLIT2-IT1-201ENST00000515882 PRR29P0C7W0 189 aa13.17□□□□□ -0.3
SLIT2-IT1-201ENST00000515882 CHADLQ6NUI6 762 aa13.15□□□□□ -0.3
SLIT2-IT1-201ENST00000515882 PABPN1Q86U42 306 aaKnown RBP eCLIP13.13□□□□□ -0.31
SLIT2-IT1-201ENST00000515882 LHX8Q68G74 356 aa13.1□□□□□ -0.31
SLIT2-IT1-201ENST00000515882 CLCN6P51797 869 aa13.02□□□□□ -0.33
SLIT2-IT1-201ENST00000515882 CD44P16070 742 aaKnown RBP12.98□□□□□ -0.33
SLIT2-IT1-201ENST00000515882 FARP1Q9Y4F1 1045 aaPredicted RBP12.98□□□□□ -0.33
SLIT2-IT1-201ENST00000515882 POTEIP0CG38 1075 aa12.91□□□□□ -0.34
SLIT2-IT1-201ENST00000515882 ZNF579Q8NAF0 562 aaKnown RBP12.8□□□□□ -0.36
SLIT2-IT1-201ENST00000515882 DCBLD2Q96PD2 775 aa12.8□□□□□ -0.36
SLIT2-IT1-201ENST00000515882 STAG3Q9UJ98 1225 aa12.79□□□□□ -0.36
SLIT2-IT1-201ENST00000515882 ZRANB1Q9UGI0 708 aa12.74□□□□□ -0.37
SLIT2-IT1-201ENST00000515882 CREBZFQ9NS37 354 aa12.73□□□□□ -0.37
SLIT2-IT1-201ENST00000515882 CSRNP3Q8WYN3 585 aa12.71□□□□□ -0.37
SLIT2-IT1-201ENST00000515882 GALR2O43603 387 aaPredicted RBP12.61□□□□□ -0.39
SLIT2-IT1-201ENST00000515882 PAK3O75914 559 aaPredicted RBP12.61□□□□□ -0.39
SLIT2-IT1-201ENST00000515882 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
SLIT2-IT1-201ENST00000515882 NPM1P06748 294 aaKnown RBP eCLIP12.55□□□□□ -0.4
SLIT2-IT1-201ENST00000515882 OTUD5Q96G74 571 aa12.51□□□□□ -0.41
SLIT2-IT1-201ENST00000515882 PLSCR2Q9NRY7 297 aa12.5□□□□□ -0.41
SLIT2-IT1-201ENST00000515882 PHF12Q96QT6 1004 aa12.49□□□□□ -0.41
SLIT2-IT1-201ENST00000515882 MNX1P50219 401 aaPredicted RBP12.47□□□□□ -0.41
SLIT2-IT1-201ENST00000515882 POTEB2H3BUK9 544 aa12.46□□□□□ -0.41
SLIT2-IT1-201ENST00000515882 PELP1Q8IZL8 1130 aaKnown RBP12.4□□□□□ -0.42
SLIT2-IT1-201ENST00000515882 ASTLQ6HA08 431 aaPredicted RBP12.38□□□□□ -0.43
SLIT2-IT1-201ENST00000515882 SLC39A7Q92504 469 aa12.35□□□□□ -0.43
SLIT2-IT1-201ENST00000515882 C7P10643 843 aa12.34□□□□□ -0.43
SLIT2-IT1-201ENST00000515882 MS4A3Q96HJ5 214 aa12.34□□□□□ -0.43
SLIT2-IT1-201ENST00000515882 POTEMA6NI47 508 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms