Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 SUMO2P15-201ENST00000604285 278 ntBASIC5.1□□□□□ -1.59
VPS13CQ709C8 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 ABCC11-203ENST00000394747 4862 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 ABCA8-201ENST00000269080 5677 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 WDR95P-201ENST00000425638 1542 ntBASIC5.09□□□□□ -1.59
VPS13CQ709C8 MCM3AP-202ENST00000397708 6333 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13CQ709C8 C14orf132-203ENST00000555004 7583 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13CQ709C8 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13CQ709C8 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 HMGB1P20-201ENST00000402555 677 ntBASIC5.09□□□□□ -1.59
VPS13CQ709C8 RPL37P18-201ENST00000411602 243 ntBASIC5.09□□□□□ -1.59
VPS13CQ709C8 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 RPL35AP31-201ENST00000418340 337 ntBASIC5.09□□□□□ -1.59
VPS13CQ709C8 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 Z80107.2-201ENST00000445127 392 ntBASIC5.09□□□□□ -1.59
VPS13CQ709C8 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 RN7SL184P-201ENST00000488308 297 ntBASIC5.09□□□□□ -1.59
VPS13CQ709C8 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13CQ709C8 NEPRO-202ENST00000383675 4672 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13CQ709C8 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13CQ709C8 GIGYF2-203ENST00000409451 5937 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13CQ709C8 MFSD8-216ENST00000641147 4009 ntBASIC5.09□□□□□ -1.59
VPS13CQ709C8 MADD-210ENST00000407859 5744 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13CQ709C8 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 PLA2G4E-201ENST00000399518 5266 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 SLC7A6-201ENST00000219343 6251 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13CQ709C8 AC062022.1-201ENST00000451026 1684 ntBASIC5.09□□□□□ -1.59
VPS13CQ709C8 RNA5SP131-201ENST00000365452 119 ntBASIC5.09□□□□□ -1.59
VPS13CQ709C8 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13CQ709C8 ERMN-202ENST00000409216 746 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 AC245884.2-201ENST00000426257 404 ntBASIC5.09□□□□□ -1.59
VPS13CQ709C8 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 AC106800.3-201ENST00000511389 308 ntBASIC5.09□□□□□ -1.59
VPS13CQ709C8 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 AC007204.2-201ENST00000615022 616 ntBASIC5.09□□□□□ -1.59
VPS13CQ709C8 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 OR7A1P-202ENST00000641542 1158 ntBASIC5.09□□□□□ -1.59
VPS13CQ709C8 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13CQ709C8 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13CQ709C8 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13CQ709C8 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13CQ709C8 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13CQ709C8 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13CQ709C8 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS13CQ709C8 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
VPS13CQ709C8 OR5W1P-201ENST00000423705 938 ntBASIC5.09□□□□□ -1.6
VPS13CQ709C8 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.09□□□□□ -1.6
VPS13CQ709C8 RPL7L1P11-201ENST00000446092 721 ntBASIC5.09□□□□□ -1.6
VPS13CQ709C8 AC092865.4-201ENST00000477936 615 ntBASIC5.09□□□□□ -1.6
VPS13CQ709C8 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.09□□□□□ -1.6
VPS13CQ709C8 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.09□□□□□ -1.6
VPS13CQ709C8 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
VPS13CQ709C8 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
VPS13CQ709C8 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
VPS13CQ709C8 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
VPS13CQ709C8 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
VPS13CQ709C8 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
VPS13CQ709C8 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
VPS13CQ709C8 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
VPS13CQ709C8 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
VPS13CQ709C8 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.09□□□□□ -1.6
VPS13CQ709C8 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC5.09□□□□□ -1.6
VPS13CQ709C8 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 CR788268.1-201ENST00000603931 1809 ntBASIC5.08□□□□□ -1.6
VPS13CQ709C8 GABRA1-203ENST00000428797 4285 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13CQ709C8 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
VPS13CQ709C8 SDHDP6-201ENST00000414693 480 ntBASIC5.08□□□□□ -1.6
VPS13CQ709C8 EIF2S2P3-201ENST00000428356 999 ntBASIC5.08□□□□□ -1.6
VPS13CQ709C8 AC091390.1-201ENST00000433904 331 ntBASIC5.08□□□□□ -1.6
VPS13CQ709C8 AL157777.1-201ENST00000468100 304 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms