RNA–Protein interactions for RNA: ENST00000410103.1

PDE1A-204, Transcript of phosphodiesterase 1A, humanhuman

TSL 1 (best) BASIC

Gene PDE1A, Length 2,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1A-204ENST00000410103 AEBP2Q6ZN18 517 aaPredicted RBP16.5■□□□□ 0.23
PDE1A-204ENST00000410103 CHIC1Q5VXU3 224 aa15.42■□□□□ 0.06
PDE1A-204ENST00000410103 NISCHQ9Y2I1 1504 aa14.38□□□□□ -0.11
PDE1A-204ENST00000410103 SENP3Q9H4L4 574 aaPredicted RBP14.11□□□□□ -0.15
PDE1A-204ENST00000410103 PHF23Q9BUL5 403 aaPredicted RBP13.9□□□□□ -0.18
PDE1A-204ENST00000410103 FOXD1Q16676 465 aa13.2□□□□□ -0.3
PDE1A-204ENST00000410103 POTEDQ86YR6 584 aa12.64□□□□□ -0.39
PDE1A-204ENST00000410103 CCDC180Q9P1Z9 1646 aa12.57□□□□□ -0.4
PDE1A-204ENST00000410103 MSH5O43196 834 aa12.45□□□□□ -0.42
PDE1A-204ENST00000410103 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
PDE1A-204ENST00000410103 ABCC9O60706 1549 aa12.24□□□□□ -0.45
PDE1A-204ENST00000410103 PLPPR3Q6T4P5 718 aa12.16□□□□□ -0.46
PDE1A-204ENST00000410103 PPP6R1Q9UPN7 881 aa12.13□□□□□ -0.47
PDE1A-204ENST00000410103 ADRA2BP18089 450 aa12.08□□□□□ -0.48
PDE1A-204ENST00000410103 DCAF8L2P0C7V8 631 aa12.08□□□□□ -0.48
PDE1A-204ENST00000410103 ZCCHC6Q5VYS8 1495 aaKnown RBP12.02□□□□□ -0.49
PDE1A-204ENST00000410103 DCAF1Q9Y4B6 1507 aa11.84□□□□□ -0.51
PDE1A-204ENST00000410103 NACADO15069 1562 aa11.81□□□□□ -0.52
PDE1A-204ENST00000410103 MYO15BQ96JP2 1530 aa11.78□□□□□ -0.52
PDE1A-204ENST00000410103 RB1CC1Q8TDY2 1594 aa11.77□□□□□ -0.53
PDE1A-204ENST00000410103 SHROOM4Q9ULL8 1493 aa11.65□□□□□ -0.54
PDE1A-204ENST00000410103 SCRIBQ14160 1630 aa11.61□□□□□ -0.55
PDE1A-204ENST00000410103 PABPN1Q86U42 306 aaKnown RBP eCLIP11.54□□□□□ -0.56
PDE1A-204ENST00000410103 UNC13AQ9UPW8 1703 aa11.48□□□□□ -0.57
PDE1A-204ENST00000410103 BICRAQ9NZM4 1560 aa11.44□□□□□ -0.58
PDE1A-204ENST00000410103 CECR2Q9BXF3 1484 aa11.24□□□□□ -0.61
PDE1A-204ENST00000410103 MAPK8IP2Q13387 824 aaPredicted RBP11.19□□□□□ -0.62
PDE1A-204ENST00000410103 DMRT2Q9Y5R5 561 aa11.15□□□□□ -0.62
PDE1A-204ENST00000410103 MROH2BQ7Z745 1585 aa11.12□□□□□ -0.63
PDE1A-204ENST00000410103 EIF4G1Q04637 1599 aaKnown RBP11.12□□□□□ -0.63
PDE1A-204ENST00000410103 BAZ1AQ9NRL2 1556 aaPredicted RBP11.1□□□□□ -0.63
PDE1A-204ENST00000410103 SUPT5HO00267 1087 aaKnown RBP11.09□□□□□ -0.63
PDE1A-204ENST00000410103 RSF1Q96T23 1441 aaPredicted RBP11.09□□□□□ -0.63
PDE1A-204ENST00000410103 SMARCA4P51532 1647 aa11.08□□□□□ -0.64
PDE1A-204ENST00000410103 DNAJC5BQ9UF47 199 aa11.08□□□□□ -0.64
PDE1A-204ENST00000410103 SCAF1Q9H7N4 1312 aaKnown RBP11.04□□□□□ -0.64
PDE1A-204ENST00000410103 CC2D2AQ9P2K1 1620 aa11.02□□□□□ -0.65
PDE1A-204ENST00000410103 ATAD2BQ9ULI0 1458 aa11□□□□□ -0.65
PDE1A-204ENST00000410103 WIZO95785 1651 aa10.99□□□□□ -0.65
PDE1A-204ENST00000410103 SMARCA2P51531 1590 aa10.94□□□□□ -0.66
PDE1A-204ENST00000410103 NCAPD3P42695 1498 aa10.93□□□□□ -0.66
PDE1A-204ENST00000410103 PEG3Q9GZU2 1588 aa10.93□□□□□ -0.66
PDE1A-204ENST00000410103 BAZ1BQ9UIG0 1483 aaKnown RBP10.91□□□□□ -0.66
PDE1A-204ENST00000410103 CACNB1Q02641 598 aaPredicted RBP10.88□□□□□ -0.67
PDE1A-204ENST00000410103 TOP2AP11388 1531 aaKnown RBP10.85□□□□□ -0.67
PDE1A-204ENST00000410103 HMGXB3Q12766 1538 aa10.85□□□□□ -0.67
PDE1A-204ENST00000410103 CCDC88BA6NC98 1476 aa10.79□□□□□ -0.68
PDE1A-204ENST00000410103 DCAF8L1A6NGE4 600 aa10.74□□□□□ -0.69
PDE1A-204ENST00000410103 NESP48681 1621 aa10.66□□□□□ -0.7
PDE1A-204ENST00000410103 CADPSQ9ULU8 1353 aa10.66□□□□□ -0.7
PDE1A-204ENST00000410103 PPP4R3CPQ6ZMV5 832 aa10.65□□□□□ -0.7
PDE1A-204ENST00000410103 HOXD11P31277 338 aaPredicted RBP10.63□□□□□ -0.71
PDE1A-204ENST00000410103 CFTRP13569 1480 aa10.62□□□□□ -0.71
PDE1A-204ENST00000410103 RNF39Q9H2S5 420 aa10.58□□□□□ -0.72
PDE1A-204ENST00000410103 LAMC3Q9Y6N6 1575 aa10.57□□□□□ -0.72
PDE1A-204ENST00000410103 PDS5BQ9NTI5 1447 aa10.53□□□□□ -0.72
PDE1A-204ENST00000410103 FANCD2Q9BXW9 1451 aa10.53□□□□□ -0.72
PDE1A-204ENST00000410103 CNKSR2Q8WXI2 1034 aa10.5□□□□□ -0.73
PDE1A-204ENST00000410103 ERCC6Q03468 1493 aa10.49□□□□□ -0.73
PDE1A-204ENST00000410103 ABCC8Q09428 1581 aa10.48□□□□□ -0.73
PDE1A-204ENST00000410103 CEP164Q9UPV0 1460 aa10.48□□□□□ -0.73
PDE1A-204ENST00000410103 RNF216Q9NWF9 866 aaPredicted RBP10.47□□□□□ -0.73
PDE1A-204ENST00000410103 KIF21AQ7Z4S6 1674 aa10.45□□□□□ -0.74
PDE1A-204ENST00000410103 PRDM2Q13029 1718 aa10.43□□□□□ -0.74
PDE1A-204ENST00000410103 WRNQ14191 1432 aaPredicted RBP eCLIP10.43□□□□□ -0.74
PDE1A-204ENST00000410103 C1QBPQ07021 282 aaKnown RBP10.42□□□□□ -0.74
PDE1A-204ENST00000410103 TRIM41Q8WV44 630 aa10.42□□□□□ -0.74
PDE1A-204ENST00000410103 URB2Q14146 1524 aaKnown RBP10.41□□□□□ -0.74
PDE1A-204ENST00000410103 KCNA4P22459 653 aa10.41□□□□□ -0.74
PDE1A-204ENST00000410103 MRC2Q9UBG0 1479 aa10.41□□□□□ -0.74
PDE1A-204ENST00000410103 CUX1P39880 1505 aa10.4□□□□□ -0.74
PDE1A-204ENST00000410103 SYNJ1O43426 1573 aa10.38□□□□□ -0.75
PDE1A-204ENST00000410103 TOPBP1Q92547 1522 aa10.38□□□□□ -0.75
PDE1A-204ENST00000410103 THOC2Q8NI27 1593 aaKnown RBP10.36□□□□□ -0.75
PDE1A-204ENST00000410103 DNMBPQ6XZF7 1577 aa10.35□□□□□ -0.75
PDE1A-204ENST00000410103 WDR62O43379 1518 aa10.34□□□□□ -0.75
PDE1A-204ENST00000410103 FGD5Q6ZNL6 1462 aa10.34□□□□□ -0.75
PDE1A-204ENST00000410103 TOP2BQ02880 1626 aa10.33□□□□□ -0.76
PDE1A-204ENST00000410103 POLA1P09884 1462 aaPredicted RBP10.31□□□□□ -0.76
PDE1A-204ENST00000410103 RAD54L2Q9Y4B4 1467 aa10.31□□□□□ -0.76
PDE1A-204ENST00000410103 BIVM-ERCC5R4GMW8 1640 aa10.31□□□□□ -0.76
PDE1A-204ENST00000410103 SOGA1O94964 1423 aa10.3□□□□□ -0.76
PDE1A-204ENST00000410103 CUX2O14529 1486 aa10.29□□□□□ -0.76
PDE1A-204ENST00000410103 NCBP3Q53F19 620 aaKnown RBP10.27□□□□□ -0.77
PDE1A-204ENST00000410103 FAM9AQ8IZU1 332 aaPredicted RBP10.27□□□□□ -0.77
PDE1A-204ENST00000410103 TDRD9Q8NDG6 1382 aaKnown RBP10.25□□□□□ -0.77
PDE1A-204ENST00000410103 RUSC2Q8N2Y8 1516 aa10.24□□□□□ -0.77
PDE1A-204ENST00000410103 ZNF608Q9ULD9 1512 aaPredicted RBP10.23□□□□□ -0.77
PDE1A-204ENST00000410103 IFT140Q96RY7 1462 aa10.23□□□□□ -0.77
PDE1A-204ENST00000410103 AQRO60306 1485 aaKnown RBP eCLIP10.22□□□□□ -0.77
PDE1A-204ENST00000410103 ABCA10Q8WWZ4 1543 aa10.22□□□□□ -0.77
PDE1A-204ENST00000410103 TARBP1Q13395 1621 aaKnown RBP10.22□□□□□ -0.77
PDE1A-204ENST00000410103 KIF27Q86VH2 1401 aa10.19□□□□□ -0.78
PDE1A-204ENST00000410103 DNAJC5Q9H3Z4 198 aa10.19□□□□□ -0.78
PDE1A-204ENST00000410103 EHMT2Q96KQ7 1210 aa10.17□□□□□ -0.78
PDE1A-204ENST00000410103 GAPVD1Q14C86 1478 aa10.17□□□□□ -0.78
PDE1A-204ENST00000410103 CSRNP3Q8WYN3 585 aa10.16□□□□□ -0.78
PDE1A-204ENST00000410103 IGF1RP08069 1367 aa10.15□□□□□ -0.78
PDE1A-204ENST00000410103 WDR97A6NE52 1622 aa10.15□□□□□ -0.78
PDE1A-204ENST00000410103 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms