RNA–Protein interactions for RNA: ENST00000638005.1

CACNB4-269, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 2 BASIC

Gene CACNB4, Length 4,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-269ENST00000638005 NISCHQ9Y2I1 1504 aa14.76□□□□□ -0.05
CACNB4-269ENST00000638005 DCAF8L2P0C7V8 631 aa13.75□□□□□ -0.21
CACNB4-269ENST00000638005 SHROOM4Q9ULL8 1493 aa13.54□□□□□ -0.24
CACNB4-269ENST00000638005 SUPT5HO00267 1087 aaKnown RBP13.46□□□□□ -0.25
CACNB4-269ENST00000638005 EHMT2Q96KQ7 1210 aa12.76□□□□□ -0.37
CACNB4-269ENST00000638005 FAM9AQ8IZU1 332 aaPredicted RBP12.6□□□□□ -0.39
CACNB4-269ENST00000638005 PCGF6Q9BYE7 350 aa12.59□□□□□ -0.39
CACNB4-269ENST00000638005 CHIC1Q5VXU3 224 aa12.52□□□□□ -0.41
CACNB4-269ENST00000638005 TRIM41Q8WV44 630 aa12.41□□□□□ -0.42
CACNB4-269ENST00000638005 LOC105371045A0A1W2PR82 267 aa12.41□□□□□ -0.42
CACNB4-269ENST00000638005 ZCCHC6Q5VYS8 1495 aaKnown RBP12.35□□□□□ -0.43
CACNB4-269ENST00000638005 TTBK1Q5TCY1 1321 aaPredicted RBP12.31□□□□□ -0.44
CACNB4-269ENST00000638005 PPARGC1BQ86YN6 1023 aaKnown RBP12.22□□□□□ -0.45
CACNB4-269ENST00000638005 ABCC9O60706 1549 aa12.21□□□□□ -0.45
CACNB4-269ENST00000638005 HRCP23327 699 aa12.19□□□□□ -0.46
CACNB4-269ENST00000638005 CCDC180Q9P1Z9 1646 aa12.17□□□□□ -0.46
CACNB4-269ENST00000638005 RANGAP1P46060 587 aaPredicted RBP12.11□□□□□ -0.47
CACNB4-269ENST00000638005 TRIM26Q12899 539 aaPredicted RBP12.1□□□□□ -0.47
CACNB4-269ENST00000638005 MYO15BQ96JP2 1530 aa12.05□□□□□ -0.48
CACNB4-269ENST00000638005 UBTFP17480 764 aaKnown RBP12.04□□□□□ -0.48
CACNB4-269ENST00000638005 SCRIBQ14160 1630 aa12.01□□□□□ -0.49
CACNB4-269ENST00000638005 CCER1Q8TC90 406 aaPredicted RBP11.99□□□□□ -0.49
CACNB4-269ENST00000638005 APLP2Q06481 763 aa11.98□□□□□ -0.49
CACNB4-269ENST00000638005 PABPN1Q86U42 306 aaKnown RBP eCLIP11.98□□□□□ -0.49
CACNB4-269ENST00000638005 ZEB1P37275 1124 aaPredicted RBP11.95□□□□□ -0.5
CACNB4-269ENST00000638005 PELP1Q8IZL8 1130 aaKnown RBP11.87□□□□□ -0.51
CACNB4-269ENST00000638005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.82□□□□□ -0.52
CACNB4-269ENST00000638005 RSF1Q96T23 1441 aaPredicted RBP11.82□□□□□ -0.52
CACNB4-269ENST00000638005 DCAF1Q9Y4B6 1507 aa11.76□□□□□ -0.53
CACNB4-269ENST00000638005 HNRNPUL2Q1KMD3 747 aaKnown RBP11.73□□□□□ -0.53
CACNB4-269ENST00000638005 ATP1B4Q9UN42 357 aaPredicted RBP11.73□□□□□ -0.53
CACNB4-269ENST00000638005 CECR2Q9BXF3 1484 aa11.68□□□□□ -0.54
CACNB4-269ENST00000638005 YTHDC1Q96MU7 727 aaKnown RBP11.66□□□□□ -0.54
CACNB4-269ENST00000638005 ITGAEP38570 1179 aa11.63□□□□□ -0.55
CACNB4-269ENST00000638005 CSRNP3Q8WYN3 585 aa11.62□□□□□ -0.55
CACNB4-269ENST00000638005 CENPBP07199 599 aaPredicted RBP11.61□□□□□ -0.55
CACNB4-269ENST00000638005 RB1CC1Q8TDY2 1594 aa11.58□□□□□ -0.55
CACNB4-269ENST00000638005 NACADO15069 1562 aa11.58□□□□□ -0.56
CACNB4-269ENST00000638005 MROH2BQ7Z745 1585 aa11.54□□□□□ -0.56
CACNB4-269ENST00000638005 MYT1Q01538 1121 aa11.54□□□□□ -0.56
CACNB4-269ENST00000638005 DIEXFQ68CQ4 756 aaKnown RBP11.53□□□□□ -0.56
CACNB4-269ENST00000638005 BAZ1AQ9NRL2 1556 aaPredicted RBP11.41□□□□□ -0.58
CACNB4-269ENST00000638005 WIZO95785 1651 aa11.4□□□□□ -0.58
CACNB4-269ENST00000638005 CEP162Q5TB80 1403 aa11.38□□□□□ -0.59
CACNB4-269ENST00000638005 SOGA1O94964 1423 aa11.38□□□□□ -0.59
CACNB4-269ENST00000638005 P3H3Q8IVL6 736 aa11.37□□□□□ -0.59
CACNB4-269ENST00000638005 ABCC8Q09428 1581 aa11.37□□□□□ -0.59
CACNB4-269ENST00000638005 FAM50AQ14320 339 aaKnown RBP11.36□□□□□ -0.59
CACNB4-269ENST00000638005 CCDC88BA6NC98 1476 aa11.35□□□□□ -0.59
CACNB4-269ENST00000638005 WRNQ14191 1432 aaPredicted RBP eCLIP11.34□□□□□ -0.59
CACNB4-269ENST00000638005 ZNF316A6NFI3 1004 aaPredicted RBP11.34□□□□□ -0.59
CACNB4-269ENST00000638005 GTF3C3Q9Y5Q9 886 aa11.31□□□□□ -0.6
CACNB4-269ENST00000638005 CLIP1P30622 1438 aa11.3□□□□□ -0.6
CACNB4-269ENST00000638005 NEUROD1Q13562 356 aa11.29□□□□□ -0.6
CACNB4-269ENST00000638005 TNIKQ9UKE5 1360 aa11.28□□□□□ -0.6
CACNB4-269ENST00000638005 BAZ1BQ9UIG0 1483 aaKnown RBP11.27□□□□□ -0.6
CACNB4-269ENST00000638005 GOLGA3Q08378 1498 aa11.27□□□□□ -0.61
CACNB4-269ENST00000638005 ACIN1Q9UKV3 1341 aaKnown RBP11.25□□□□□ -0.61
CACNB4-269ENST00000638005 EEA1Q15075 1411 aa11.25□□□□□ -0.61
CACNB4-269ENST00000638005 SCAF1Q9H7N4 1312 aaKnown RBP11.21□□□□□ -0.61
CACNB4-269ENST00000638005 TOP2AP11388 1531 aaKnown RBP11.21□□□□□ -0.61
CACNB4-269ENST00000638005 ARID3CA6NKF2 412 aa11.21□□□□□ -0.62
CACNB4-269ENST00000638005 RUSC2Q8N2Y8 1516 aa11.2□□□□□ -0.62
CACNB4-269ENST00000638005 CEP164Q9UPV0 1460 aa11.18□□□□□ -0.62
CACNB4-269ENST00000638005 CNGB1Q14028 1251 aaPredicted RBP11.17□□□□□ -0.62
CACNB4-269ENST00000638005 SMARCA4P51532 1647 aa11.17□□□□□ -0.62
CACNB4-269ENST00000638005 MIER1Q8N108 512 aa11.14□□□□□ -0.63
CACNB4-269ENST00000638005 NEFLP07196 543 aa11.13□□□□□ -0.63
CACNB4-269ENST00000638005 TRIM52Q96A61 297 aa11.13□□□□□ -0.63
CACNB4-269ENST00000638005 POLR3GLQ9BT43 218 aa11.13□□□□□ -0.63
CACNB4-269ENST00000638005 SMARCA2P51531 1590 aa11.09□□□□□ -0.63
CACNB4-269ENST00000638005 KIF27Q86VH2 1401 aa11.08□□□□□ -0.64
CACNB4-269ENST00000638005 ATAD2BQ9ULI0 1458 aa11.08□□□□□ -0.64
CACNB4-269ENST00000638005 FBLN2P98095 1184 aa11.07□□□□□ -0.64
CACNB4-269ENST00000638005 KANK4Q5T7N3 995 aaPredicted RBP11.07□□□□□ -0.64
CACNB4-269ENST00000638005 BCANQ96GW7 911 aa11.06□□□□□ -0.64
CACNB4-269ENST00000638005 RAPGEF2Q9Y4G8 1499 aa11.05□□□□□ -0.64
CACNB4-269ENST00000638005 HIRIP3Q9BW71 556 aaPredicted RBP11.04□□□□□ -0.64
CACNB4-269ENST00000638005 VPS8Q8N3P4 1428 aa11.04□□□□□ -0.64
CACNB4-269ENST00000638005 DDX10Q13206 875 aaKnown RBP11.02□□□□□ -0.65
CACNB4-269ENST00000638005 CHIC2Q9UKJ5 165 aa11.01□□□□□ -0.65
CACNB4-269ENST00000638005 CUX2O14529 1486 aa11□□□□□ -0.65
CACNB4-269ENST00000638005 ZNF326Q5BKZ1 582 aaKnown RBP10.99□□□□□ -0.65
CACNB4-269ENST00000638005 ANP32CO43423 234 aa10.98□□□□□ -0.65
CACNB4-269ENST00000638005 CARMIL1Q5VZK9 1371 aa10.96□□□□□ -0.66
CACNB4-269ENST00000638005 MTUS2Q5JR59 1369 aa10.96□□□□□ -0.66
CACNB4-269ENST00000638005 SIN3AQ96ST3 1273 aa10.96□□□□□ -0.66
CACNB4-269ENST00000638005 ZNF777Q9ULD5 760 aaPredicted RBP10.95□□□□□ -0.66
CACNB4-269ENST00000638005 CCNB3Q8WWL7 1395 aa10.94□□□□□ -0.66
CACNB4-269ENST00000638005 TONSLQ96HA7 1378 aa10.94□□□□□ -0.66
CACNB4-269ENST00000638005 ERICH6Q7L0X2 663 aa10.93□□□□□ -0.66
CACNB4-269ENST00000638005 RRP7BPQ9NSQ0 103 aa10.92□□□□□ -0.66
CACNB4-269ENST00000638005 MYT1LQ9UL68 1186 aa10.91□□□□□ -0.66
CACNB4-269ENST00000638005 SYNJ1O43426 1573 aa10.89□□□□□ -0.67
CACNB4-269ENST00000638005 CADPSQ9ULU8 1353 aa10.86□□□□□ -0.67
CACNB4-269ENST00000638005 FKBP8Q14318 412 aa10.85□□□□□ -0.67
CACNB4-269ENST00000638005 TDRD9Q8NDG6 1382 aaKnown RBP10.84□□□□□ -0.67
CACNB4-269ENST00000638005 BICRAQ9NZM4 1560 aa10.83□□□□□ -0.68
CACNB4-269ENST00000638005 CLSPNQ9HAW4 1339 aa10.83□□□□□ -0.68
CACNB4-269ENST00000638005 CDK11AQ9UQ88 783 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms