RNA–Protein interactions for RNA: ENST00000639758.1

PIGN-238, Transcript of phosphatidylinositol glycan anchor biosynthesis class N, human

TSL 5 BASIC

Gene PIGN, Length 4,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIGN-238	ENST00000639758	DCAF8L2	P0C7V8	631 aa		14.25	□□□□□ -0.13
PIGN-238	ENST00000639758	NISCH	Q9Y2I1	1504 aa		14.15	□□□□□ -0.14
PIGN-238	ENST00000639758	SHROOM4	Q9ULL8	1493 aa		13.35	□□□□□ -0.27
PIGN-238	ENST00000639758	SUPT5H	O00267	1087 aa	Known RBP	13.18	□□□□□ -0.3
PIGN-238	ENST00000639758	EHMT2	Q96KQ7	1210 aa		12.82	□□□□□ -0.36
PIGN-238	ENST00000639758	ABCC9	O60706	1549 aa		12.61	□□□□□ -0.39
PIGN-238	ENST00000639758	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
PIGN-238	ENST00000639758	FAM9A	Q8IZU1	332 aa	Predicted RBP	12.44	□□□□□ -0.42
PIGN-238	ENST00000639758	RANGAP1	P46060	587 aa	Predicted RBP	12.28	□□□□□ -0.44
PIGN-238	ENST00000639758	TTBK1	Q5TCY1	1321 aa	Predicted RBP	12.19	□□□□□ -0.46
PIGN-238	ENST00000639758	TRIM41	Q8WV44	630 aa		12.03	□□□□□ -0.48
PIGN-238	ENST00000639758	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.92	□□□□□ -0.5
PIGN-238	ENST00000639758	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.91	□□□□□ -0.5
PIGN-238	ENST00000639758	UBTF	P17480	764 aa	Known RBP	11.85	□□□□□ -0.51
PIGN-238	ENST00000639758	LOC105371045	A0A1W2PR82	267 aa		11.84	□□□□□ -0.51
PIGN-238	ENST00000639758	SCRIB	Q14160	1630 aa		11.76	□□□□□ -0.53
PIGN-238	ENST00000639758	CHIC1	Q5VXU3	224 aa		11.73	□□□□□ -0.53
PIGN-238	ENST00000639758	APLP2	Q06481	763 aa		11.71	□□□□□ -0.53
PIGN-238	ENST00000639758	ZCCHC6	Q5VYS8	1495 aa	Known RBP	11.67	□□□□□ -0.54
PIGN-238	ENST00000639758	PCGF6	Q9BYE7	350 aa		11.67	□□□□□ -0.54
PIGN-238	ENST00000639758	FBLN2	P98095	1184 aa		11.62	□□□□□ -0.55
PIGN-238	ENST00000639758	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.56	□□□□□ -0.56
PIGN-238	ENST00000639758	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.56	□□□□□ -0.56
PIGN-238	ENST00000639758	CCDC180	Q9P1Z9	1646 aa		11.54	□□□□□ -0.56
PIGN-238	ENST00000639758	ITGAE	P38570	1179 aa		11.52	□□□□□ -0.57
PIGN-238	ENST00000639758	ARID3C	A6NKF2	412 aa		11.51	□□□□□ -0.57
PIGN-238	ENST00000639758	P3H3	Q8IVL6	736 aa		11.46	□□□□□ -0.57
PIGN-238	ENST00000639758	CECR2	Q9BXF3	1484 aa		11.42	□□□□□ -0.58
PIGN-238	ENST00000639758	RB1CC1	Q8TDY2	1594 aa		11.4	□□□□□ -0.58
PIGN-238	ENST00000639758	MYT1L	Q9UL68	1186 aa		11.37	□□□□□ -0.59
PIGN-238	ENST00000639758	RSF1	Q96T23	1441 aa	Predicted RBP	11.31	□□□□□ -0.6
PIGN-238	ENST00000639758	NACAD	O15069	1562 aa		11.28	□□□□□ -0.6
PIGN-238	ENST00000639758	CCER1	Q8TC90	406 aa	Predicted RBP	11.27	□□□□□ -0.6
PIGN-238	ENST00000639758	CSRNP3	Q8WYN3	585 aa		11.23	□□□□□ -0.61
PIGN-238	ENST00000639758	DNAJC5B	Q9UF47	199 aa		11.2	□□□□□ -0.62
PIGN-238	ENST00000639758	FAM50A	Q14320	339 aa	Known RBP	11.16	□□□□□ -0.62
PIGN-238	ENST00000639758	CNGB1	Q14028	1251 aa	Predicted RBP	11.14	□□□□□ -0.63
PIGN-238	ENST00000639758	MROH2B	Q7Z745	1585 aa		11.13	□□□□□ -0.63
PIGN-238	ENST00000639758	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.13	□□□□□ -0.63
PIGN-238	ENST00000639758	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.09	□□□□□ -0.63
PIGN-238	ENST00000639758	PLPPR3	Q6T4P5	718 aa		11.08	□□□□□ -0.64
PIGN-238	ENST00000639758	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.08	□□□□□ -0.64
PIGN-238	ENST00000639758	TRIM26	Q12899	539 aa	Predicted RBP	11.06	□□□□□ -0.64
PIGN-238	ENST00000639758	POLR3GL	Q9BT43	218 aa		11.03	□□□□□ -0.64
PIGN-238	ENST00000639758	ERCC6	Q03468	1493 aa		11.02	□□□□□ -0.65
PIGN-238	ENST00000639758	DCAF1	Q9Y4B6	1507 aa		11.01	□□□□□ -0.65
PIGN-238	ENST00000639758	TRIM52	Q96A61	297 aa		10.98	□□□□□ -0.65
PIGN-238	ENST00000639758	KCNH8	Q96L42	1107 aa		10.98	□□□□□ -0.65
PIGN-238	ENST00000639758	SENP3	Q9H4L4	574 aa	Predicted RBP	10.97	□□□□□ -0.65
PIGN-238	ENST00000639758	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	10.97	□□□□□ -0.65
PIGN-238	ENST00000639758	MYO15B	Q96JP2	1530 aa		10.96	□□□□□ -0.65
PIGN-238	ENST00000639758	NEUROD1	Q13562	356 aa		10.95	□□□□□ -0.66
PIGN-238	ENST00000639758	TDRD9	Q8NDG6	1382 aa	Known RBP	10.95	□□□□□ -0.66
PIGN-238	ENST00000639758	CCDC88B	A6NC98	1476 aa		10.95	□□□□□ -0.66
PIGN-238	ENST00000639758	WRN	Q14191	1432 aa	Predicted RBP eCLIP	10.94	□□□□□ -0.66
PIGN-238	ENST00000639758	WIZ	O95785	1651 aa		10.93	□□□□□ -0.66
PIGN-238	ENST00000639758	CHIC2	Q9UKJ5	165 aa		10.93	□□□□□ -0.66
PIGN-238	ENST00000639758	ZNF326	Q5BKZ1	582 aa	Known RBP	10.91	□□□□□ -0.66
PIGN-238	ENST00000639758	SOGA1	O94964	1423 aa		10.9	□□□□□ -0.66
PIGN-238	ENST00000639758	ABCC8	Q09428	1581 aa		10.89	□□□□□ -0.67
PIGN-238	ENST00000639758	ATAD2B	Q9ULI0	1458 aa		10.88	□□□□□ -0.67
PIGN-238	ENST00000639758	YTHDC1	Q96MU7	727 aa	Known RBP	10.88	□□□□□ -0.67
PIGN-238	ENST00000639758	NPM1	P06748	294 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
PIGN-238	ENST00000639758	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
PIGN-238	ENST00000639758	CADPS	Q9ULU8	1353 aa		10.8	□□□□□ -0.68
PIGN-238	ENST00000639758	CUX2	O14529	1486 aa		10.8	□□□□□ -0.68
PIGN-238	ENST00000639758	SLC4A1AP	Q9BWU0	796 aa	Known RBP	10.8	□□□□□ -0.68
PIGN-238	ENST00000639758	TRH	P20396	242 aa	Predicted RBP	10.78	□□□□□ -0.68
PIGN-238	ENST00000639758	NES	P48681	1621 aa		10.77	□□□□□ -0.69
PIGN-238	ENST00000639758	CDK11A	Q9UQ88	783 aa	Predicted RBP	10.76	□□□□□ -0.69
PIGN-238	ENST00000639758	HRC	P23327	699 aa		10.75	□□□□□ -0.69
PIGN-238	ENST00000639758	CHGA	P10645	457 aa	Known RBP	10.75	□□□□□ -0.69
PIGN-238	ENST00000639758	CLIP1	P30622	1438 aa		10.74	□□□□□ -0.69
PIGN-238	ENST00000639758	KIF27	Q86VH2	1401 aa		10.74	□□□□□ -0.69
PIGN-238	ENST00000639758	RRP7BP	Q9NSQ0	103 aa		10.74	□□□□□ -0.69
PIGN-238	ENST00000639758	SMARCA2	P51531	1590 aa		10.73	□□□□□ -0.69
PIGN-238	ENST00000639758	BCAN	Q96GW7	911 aa		10.73	□□□□□ -0.69
PIGN-238	ENST00000639758	RUSC2	Q8N2Y8	1516 aa		10.73	□□□□□ -0.69
PIGN-238	ENST00000639758	CARMIL1	Q5VZK9	1371 aa		10.73	□□□□□ -0.69
PIGN-238	ENST00000639758	PDS5B	Q9NTI5	1447 aa		10.73	□□□□□ -0.69
PIGN-238	ENST00000639758	SMARCA4	P51532	1647 aa		10.72	□□□□□ -0.69
PIGN-238	ENST00000639758	EIF4G1	Q04637	1599 aa	Known RBP	10.71	□□□□□ -0.69
PIGN-238	ENST00000639758	CYB5RL	Q6IPT4	315 aa		10.71	□□□□□ -0.7
PIGN-238	ENST00000639758	MTUS2	Q5JR59	1369 aa		10.7	□□□□□ -0.7
PIGN-238	ENST00000639758	ZEB1	P37275	1124 aa	Predicted RBP	10.69	□□□□□ -0.7
PIGN-238	ENST00000639758	PLEKHD1	A6NEE1	506 aa		10.68	□□□□□ -0.7
PIGN-238	ENST00000639758	CEP162	Q5TB80	1403 aa		10.68	□□□□□ -0.7
PIGN-238	ENST00000639758	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.66	□□□□□ -0.7
PIGN-238	ENST00000639758	FANCD2	Q9BXW9	1451 aa		10.66	□□□□□ -0.7
PIGN-238	ENST00000639758	RAD54L2	Q9Y4B4	1467 aa		10.66	□□□□□ -0.7
PIGN-238	ENST00000639758	KANK4	Q5T7N3	995 aa	Predicted RBP	10.65	□□□□□ -0.71
PIGN-238	ENST00000639758	TOP2A	P11388	1531 aa	Known RBP	10.64	□□□□□ -0.71
PIGN-238	ENST00000639758	MLEC	Q14165	292 aa		10.64	□□□□□ -0.71
PIGN-238	ENST00000639758	PLEKHG5	O94827	1062 aa		10.63	□□□□□ -0.71
PIGN-238	ENST00000639758	ESF1	Q9H501	851 aa	Known RBP	10.63	□□□□□ -0.71
PIGN-238	ENST00000639758	KDM2A	Q9Y2K7	1162 aa		10.63	□□□□□ -0.71
PIGN-238	ENST00000639758	BICRA	Q9NZM4	1560 aa		10.62	□□□□□ -0.71
PIGN-238	ENST00000639758	AQR	O60306	1485 aa	Known RBP eCLIP	10.62	□□□□□ -0.71
PIGN-238	ENST00000639758	TSPY4	P0CV99	314 aa		10.62	□□□□□ -0.71
PIGN-238	ENST00000639758	TSPY10	P0CW01	314 aa		10.62	□□□□□ -0.71

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