RNA–Protein interactions for RNA: ENST00000523742.1

LINC01947-201, Transcript of long intergenic non-protein coding RNA 1947, humanhuman

TSL 4 BASIC

Gene LINC01947, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01947-201ENST00000523742 AEBP2Q6ZN18 517 aaPredicted RBP31.12■■■□□ 2.57
LINC01947-201ENST00000523742 CHIC1Q5VXU3 224 aa28.81■■■□□ 2.2
LINC01947-201ENST00000523742 SENP3Q9H4L4 574 aaPredicted RBP26.43■■□□□ 1.82
LINC01947-201ENST00000523742 PHF23Q9BUL5 403 aaPredicted RBP26.08■■□□□ 1.77
LINC01947-201ENST00000523742 FOXD1Q16676 465 aa24.89■■□□□ 1.58
LINC01947-201ENST00000523742 POTEDQ86YR6 584 aa24.37■■□□□ 1.49
LINC01947-201ENST00000523742 MSH5O43196 834 aa23.41■■□□□ 1.34
LINC01947-201ENST00000523742 PIAS4Q8N2W9 510 aaPredicted RBP22.98■■□□□ 1.27
LINC01947-201ENST00000523742 PPP6R1Q9UPN7 881 aa22.75■■□□□ 1.23
LINC01947-201ENST00000523742 ADRA2BP18089 450 aa22.58■■□□□ 1.21
LINC01947-201ENST00000523742 PLPPR3Q6T4P5 718 aa22.43■■□□□ 1.18
LINC01947-201ENST00000523742 MAPK8IP2Q13387 824 aaPredicted RBP21.03■□□□□ 0.96
LINC01947-201ENST00000523742 DMRT2Q9Y5R5 561 aa20.9■□□□□ 0.94
LINC01947-201ENST00000523742 CACNB1Q02641 598 aaPredicted RBP20.64■□□□□ 0.89
LINC01947-201ENST00000523742 SCAF1Q9H7N4 1312 aaKnown RBP20.39■□□□□ 0.85
LINC01947-201ENST00000523742 DCAF8L1A6NGE4 600 aa20.08■□□□□ 0.81
LINC01947-201ENST00000523742 RNF39Q9H2S5 420 aa20.01■□□□□ 0.79
LINC01947-201ENST00000523742 HOXD11P31277 338 aaPredicted RBP19.82■□□□□ 0.76
LINC01947-201ENST00000523742 PPP4R3CPQ6ZMV5 832 aa19.64■□□□□ 0.73
LINC01947-201ENST00000523742 C1QBPQ07021 282 aaKnown RBP19.57■□□□□ 0.72
LINC01947-201ENST00000523742 RNF216Q9NWF9 866 aaPredicted RBP19.41■□□□□ 0.7
LINC01947-201ENST00000523742 CNKSR2Q8WXI2 1034 aa19.38■□□□□ 0.69
LINC01947-201ENST00000523742 DNAJC5BQ9UF47 199 aa19.15■□□□□ 0.66
LINC01947-201ENST00000523742 POTEHQ6S545 545 aa18.89■□□□□ 0.61
LINC01947-201ENST00000523742 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.83■□□□□ 0.6
LINC01947-201ENST00000523742 DSG3P32926 999 aa18.49■□□□□ 0.55
LINC01947-201ENST00000523742 NCBP3Q53F19 620 aaKnown RBP18.48■□□□□ 0.55
LINC01947-201ENST00000523742 SPINK5Q9NQ38 1064 aaPredicted RBP18.47■□□□□ 0.55
LINC01947-201ENST00000523742 U3KPZ7 1027 aaPredicted RBP18.46■□□□□ 0.55
LINC01947-201ENST00000523742 NPM3O75607 178 aaKnown RBP18.41■□□□□ 0.54
LINC01947-201ENST00000523742 CAPN15O75808 1086 aa18.36■□□□□ 0.53
LINC01947-201ENST00000523742 ABCB7O75027 752 aa17.96■□□□□ 0.47
LINC01947-201ENST00000523742 TRHP20396 242 aaPredicted RBP17.9■□□□□ 0.46
LINC01947-201ENST00000523742 SLC4A2P04920 1241 aa17.85■□□□□ 0.45
LINC01947-201ENST00000523742 ZNF219Q9P2Y4 722 aaPredicted RBP17.72■□□□□ 0.43
LINC01947-201ENST00000523742 APLP2Q06481 763 aa17.55■□□□□ 0.4
LINC01947-201ENST00000523742 CHRDL2Q6WN34 429 aa17.54■□□□□ 0.4
LINC01947-201ENST00000523742 RBM42Q9BTD8 480 aaKnown RBP17.48■□□□□ 0.39
LINC01947-201ENST00000523742 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.4■□□□□ 0.38
LINC01947-201ENST00000523742 KCNA4P22459 653 aa17.4■□□□□ 0.38
LINC01947-201ENST00000523742 HNRNPUL2Q1KMD3 747 aaKnown RBP17.4■□□□□ 0.38
LINC01947-201ENST00000523742 SAMD1Q6SPF0 538 aaPredicted RBP17.34■□□□□ 0.37
LINC01947-201ENST00000523742 SP7Q8TDD2 431 aaPredicted RBP17.32■□□□□ 0.36
LINC01947-201ENST00000523742 POLA2Q14181 598 aa17.25■□□□□ 0.35
LINC01947-201ENST00000523742 PIP4P2Q8N4L2 257 aa17.01■□□□□ 0.31
LINC01947-201ENST00000523742 AKT1S1Q96B36 256 aa16.98■□□□□ 0.31
LINC01947-201ENST00000523742 MYCNP04198 464 aaPredicted RBP16.93■□□□□ 0.3
LINC01947-201ENST00000523742 REM2Q8IYK8 340 aaPredicted RBP16.91■□□□□ 0.3
LINC01947-201ENST00000523742 HAX1O00165 279 aa16.86■□□□□ 0.29
LINC01947-201ENST00000523742 ATF5Q9Y2D1 282 aaPredicted RBP16.84■□□□□ 0.29
LINC01947-201ENST00000523742 EVX2Q03828 476 aa16.78■□□□□ 0.28
LINC01947-201ENST00000523742 PITPNM1O00562 1244 aa16.77■□□□□ 0.28
LINC01947-201ENST00000523742 OSCARQ8IYS5 282 aa16.77■□□□□ 0.28
LINC01947-201ENST00000523742 FXR2P51116 673 aaKnown RBP eCLIP16.76■□□□□ 0.27
LINC01947-201ENST00000523742 ZBTB12Q9Y330 459 aaPredicted RBP16.64■□□□□ 0.25
LINC01947-201ENST00000523742 FOXD4L1Q9NU39 408 aa16.36■□□□□ 0.21
LINC01947-201ENST00000523742 PRKAR2AP13861 404 aaKnown RBP16.29■□□□□ 0.2
LINC01947-201ENST00000523742 C19orf67A6NJJ6 358 aa16.25■□□□□ 0.19
LINC01947-201ENST00000523742 LHX8Q68G74 356 aa16.24■□□□□ 0.19
LINC01947-201ENST00000523742 GABBR2O75899 941 aa16.22■□□□□ 0.19
LINC01947-201ENST00000523742 SLC4A1APQ9BWU0 796 aaKnown RBP16.16■□□□□ 0.18
LINC01947-201ENST00000523742 CLEC11AQ9Y240 323 aa16.15■□□□□ 0.18
LINC01947-201ENST00000523742 SPDYE2BA6NHP3 402 aa16.14■□□□□ 0.17
LINC01947-201ENST00000523742 SPDYE6P0CI01 402 aa16.14■□□□□ 0.17
LINC01947-201ENST00000523742 SPDYE2Q495Y8 402 aa16.14■□□□□ 0.17
LINC01947-201ENST00000523742 ZBTB22O15209 634 aa16.06■□□□□ 0.16
LINC01947-201ENST00000523742 SPDYE1Q8NFV5 336 aaPredicted RBP16.05■□□□□ 0.16
LINC01947-201ENST00000523742 CHADLQ6NUI6 762 aa16.03■□□□□ 0.16
LINC01947-201ENST00000523742 POTEIP0CG38 1075 aa15.97■□□□□ 0.15
LINC01947-201ENST00000523742 MKRN4PQ13434 485 aaPredicted RBP15.97■□□□□ 0.15
LINC01947-201ENST00000523742 FBLN2P98095 1184 aa15.95■□□□□ 0.14
LINC01947-201ENST00000523742 SSUH2Q9Y2M2 353 aa15.93■□□□□ 0.14
LINC01947-201ENST00000523742 ZNF692Q9BU19 519 aaPredicted RBP15.88■□□□□ 0.13
LINC01947-201ENST00000523742 PLSCR2Q9NRY7 297 aa15.88■□□□□ 0.13
LINC01947-201ENST00000523742 ATXN8OSP0DMR3 200 aa15.85■□□□□ 0.13
LINC01947-201ENST00000523742 PRR29P0C7W0 189 aa15.72■□□□□ 0.11
LINC01947-201ENST00000523742 CD44P16070 742 aaKnown RBP15.71■□□□□ 0.11
LINC01947-201ENST00000523742 PABPN1Q86U42 306 aaKnown RBP eCLIP15.65■□□□□ 0.1
LINC01947-201ENST00000523742 FARP1Q9Y4F1 1045 aaPredicted RBP15.61■□□□□ 0.09
LINC01947-201ENST00000523742 DCBLD2Q96PD2 775 aa15.52■□□□□ 0.08
LINC01947-201ENST00000523742 OTUD5Q96G74 571 aa15.48■□□□□ 0.07
LINC01947-201ENST00000523742 POTEB2H3BUK9 544 aa15.46■□□□□ 0.07
LINC01947-201ENST00000523742 CLCN6P51797 869 aa15.44■□□□□ 0.06
LINC01947-201ENST00000523742 ZNF579Q8NAF0 562 aaKnown RBP15.42■□□□□ 0.06
LINC01947-201ENST00000523742 GALR2O43603 387 aaPredicted RBP15.38■□□□□ 0.05
LINC01947-201ENST00000523742 ZRANB1Q9UGI0 708 aa15.38■□□□□ 0.05
LINC01947-201ENST00000523742 POTEMA6NI47 508 aa15.34■□□□□ 0.05
LINC01947-201ENST00000523742 POTEGQ6S5H5 508 aa15.28■□□□□ 0.04
LINC01947-201ENST00000523742 CREBZFQ9NS37 354 aa15.25■□□□□ 0.03
LINC01947-201ENST00000523742 PELP1Q8IZL8 1130 aaKnown RBP15.21■□□□□ 0.03
LINC01947-201ENST00000523742 PHF12Q96QT6 1004 aa15.17■□□□□ 0.02
LINC01947-201ENST00000523742 POTEJP0CG39 1038 aa15.11■□□□□ 0.01
LINC01947-201ENST00000523742 LCE2DQ5TA82 110 aaPredicted RBP15.05■□□□□ -0
LINC01947-201ENST00000523742 METRNQ9UJH8 293 aa14.98□□□□□ -0.01
LINC01947-201ENST00000523742 PCDH10Q9P2E7 1040 aa14.96□□□□□ -0.01
LINC01947-201ENST00000523742 ASTLQ6HA08 431 aaPredicted RBP14.94□□□□□ -0.02
LINC01947-201ENST00000523742 PAK3O75914 559 aaPredicted RBP14.93□□□□□ -0.02
LINC01947-201ENST00000523742 MNX1P50219 401 aaPredicted RBP14.92□□□□□ -0.02
LINC01947-201ENST00000523742 MS4A3Q96HJ5 214 aa14.92□□□□□ -0.02
LINC01947-201ENST00000523742 ATMINO43313 823 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms