RNA–Protein interactions for RNA: ENST00000435608.1

BRWD1-IT1-201, BRWD1 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene BRWD1-IT1, Length 489 nt, Biotype sense overlapping, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1-IT1-201ENST00000435608 AEBP2Q6ZN18 517 aaPredicted RBP25.49■■□□□ 1.67
BRWD1-IT1-201ENST00000435608 CHIC1Q5VXU3 224 aa24.14■■□□□ 1.45
BRWD1-IT1-201ENST00000435608 SENP3Q9H4L4 574 aaPredicted RBP21.8■■□□□ 1.08
BRWD1-IT1-201ENST00000435608 PHF23Q9BUL5 403 aaPredicted RBP21.5■■□□□ 1.03
BRWD1-IT1-201ENST00000435608 FOXD1Q16676 465 aa20.31■□□□□ 0.84
BRWD1-IT1-201ENST00000435608 PLPPR3Q6T4P5 718 aa19.27■□□□□ 0.68
BRWD1-IT1-201ENST00000435608 MSH5O43196 834 aa19.07■□□□□ 0.64
BRWD1-IT1-201ENST00000435608 PIAS4Q8N2W9 510 aaPredicted RBP18.98■□□□□ 0.63
BRWD1-IT1-201ENST00000435608 PPP6R1Q9UPN7 881 aa18.9■□□□□ 0.62
BRWD1-IT1-201ENST00000435608 ADRA2BP18089 450 aa18.85■□□□□ 0.61
BRWD1-IT1-201ENST00000435608 POTEDQ86YR6 584 aa18.76■□□□□ 0.59
BRWD1-IT1-201ENST00000435608 MAPK8IP2Q13387 824 aaPredicted RBP17.34■□□□□ 0.37
BRWD1-IT1-201ENST00000435608 SCAF1Q9H7N4 1312 aaKnown RBP17.3■□□□□ 0.36
BRWD1-IT1-201ENST00000435608 DMRT2Q9Y5R5 561 aa17.26■□□□□ 0.35
BRWD1-IT1-201ENST00000435608 PPP4R3CPQ6ZMV5 832 aa16.87■□□□□ 0.29
BRWD1-IT1-201ENST00000435608 DCAF8L1A6NGE4 600 aa16.6■□□□□ 0.25
BRWD1-IT1-201ENST00000435608 HOXD11P31277 338 aaPredicted RBP16.58■□□□□ 0.24
BRWD1-IT1-201ENST00000435608 CNKSR2Q8WXI2 1034 aa16.57■□□□□ 0.24
BRWD1-IT1-201ENST00000435608 CACNB1Q02641 598 aaPredicted RBP16.44■□□□□ 0.22
BRWD1-IT1-201ENST00000435608 RNF216Q9NWF9 866 aaPredicted RBP16.44■□□□□ 0.22
BRWD1-IT1-201ENST00000435608 RNF39Q9H2S5 420 aa16.25■□□□□ 0.19
BRWD1-IT1-201ENST00000435608 NCBP3Q53F19 620 aaKnown RBP16.22■□□□□ 0.19
BRWD1-IT1-201ENST00000435608 DNAJC5BQ9UF47 199 aa16.04■□□□□ 0.16
BRWD1-IT1-201ENST00000435608 C1QBPQ07021 282 aaKnown RBP16.03■□□□□ 0.16
BRWD1-IT1-201ENST00000435608 NPM3O75607 178 aaKnown RBP15.94■□□□□ 0.14
BRWD1-IT1-201ENST00000435608 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.84■□□□□ 0.13
BRWD1-IT1-201ENST00000435608 KCNA4P22459 653 aa15.54■□□□□ 0.08
BRWD1-IT1-201ENST00000435608 U3KPZ7 1027 aaPredicted RBP15.45■□□□□ 0.06
BRWD1-IT1-201ENST00000435608 CAPN15O75808 1086 aa15.27■□□□□ 0.04
BRWD1-IT1-201ENST00000435608 SPINK5Q9NQ38 1064 aaPredicted RBP15.27■□□□□ 0.04
BRWD1-IT1-201ENST00000435608 SLC4A2P04920 1241 aa15.24■□□□□ 0.03
BRWD1-IT1-201ENST00000435608 DSG3P32926 999 aa15.18■□□□□ 0.02
BRWD1-IT1-201ENST00000435608 APLP2Q06481 763 aa15.07■□□□□ 0
BRWD1-IT1-201ENST00000435608 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.03■□□□□ -0
BRWD1-IT1-201ENST00000435608 HNRNPUL2Q1KMD3 747 aaKnown RBP15.03■□□□□ -0
BRWD1-IT1-201ENST00000435608 TRHP20396 242 aaPredicted RBP15□□□□□ -0.01
BRWD1-IT1-201ENST00000435608 ZNF219Q9P2Y4 722 aaPredicted RBP14.97□□□□□ -0.01
BRWD1-IT1-201ENST00000435608 SAMD1Q6SPF0 538 aaPredicted RBP14.93□□□□□ -0.02
BRWD1-IT1-201ENST00000435608 ABCB7O75027 752 aa14.9□□□□□ -0.02
BRWD1-IT1-201ENST00000435608 NISCHQ9Y2I1 1504 aa14.88□□□□□ -0.03
BRWD1-IT1-201ENST00000435608 MYCNP04198 464 aaPredicted RBP14.76□□□□□ -0.05
BRWD1-IT1-201ENST00000435608 POTEHQ6S545 545 aa14.69□□□□□ -0.06
BRWD1-IT1-201ENST00000435608 SLC4A1APQ9BWU0 796 aaKnown RBP14.68□□□□□ -0.06
BRWD1-IT1-201ENST00000435608 POLA2Q14181 598 aa14.57□□□□□ -0.08
BRWD1-IT1-201ENST00000435608 FOXD4L1Q9NU39 408 aa14.56□□□□□ -0.08
BRWD1-IT1-201ENST00000435608 RBM42Q9BTD8 480 aaKnown RBP14.52□□□□□ -0.09
BRWD1-IT1-201ENST00000435608 ATF5Q9Y2D1 282 aaPredicted RBP14.4□□□□□ -0.1
BRWD1-IT1-201ENST00000435608 ZBTB12Q9Y330 459 aaPredicted RBP14.29□□□□□ -0.12
BRWD1-IT1-201ENST00000435608 ZBTB22O15209 634 aa14.27□□□□□ -0.13
BRWD1-IT1-201ENST00000435608 CHRDL2Q6WN34 429 aa14.23□□□□□ -0.13
BRWD1-IT1-201ENST00000435608 AKT1S1Q96B36 256 aa14.15□□□□□ -0.14
BRWD1-IT1-201ENST00000435608 ATXN8OSP0DMR3 200 aa14.12□□□□□ -0.15
BRWD1-IT1-201ENST00000435608 OSCARQ8IYS5 282 aa14.1□□□□□ -0.15
BRWD1-IT1-201ENST00000435608 REM2Q8IYK8 340 aaPredicted RBP14.01□□□□□ -0.17
BRWD1-IT1-201ENST00000435608 FBLN2P98095 1184 aa13.89□□□□□ -0.19
BRWD1-IT1-201ENST00000435608 PITPNM1O00562 1244 aa13.85□□□□□ -0.19
BRWD1-IT1-201ENST00000435608 PIP4P2Q8N4L2 257 aa13.85□□□□□ -0.19
BRWD1-IT1-201ENST00000435608 SPDYE2BA6NHP3 402 aa13.83□□□□□ -0.2
BRWD1-IT1-201ENST00000435608 SPDYE6P0CI01 402 aa13.83□□□□□ -0.2
BRWD1-IT1-201ENST00000435608 SPDYE2Q495Y8 402 aa13.83□□□□□ -0.2
BRWD1-IT1-201ENST00000435608 FXR2P51116 673 aaKnown RBP eCLIP13.75□□□□□ -0.21
BRWD1-IT1-201ENST00000435608 MKRN4PQ13434 485 aaPredicted RBP13.73□□□□□ -0.21
BRWD1-IT1-201ENST00000435608 SP7Q8TDD2 431 aaPredicted RBP13.73□□□□□ -0.21
BRWD1-IT1-201ENST00000435608 HAX1O00165 279 aa13.66□□□□□ -0.22
BRWD1-IT1-201ENST00000435608 ZNF692Q9BU19 519 aaPredicted RBP13.65□□□□□ -0.22
BRWD1-IT1-201ENST00000435608 SPDYE1Q8NFV5 336 aaPredicted RBP13.62□□□□□ -0.23
BRWD1-IT1-201ENST00000435608 CLEC11AQ9Y240 323 aa13.61□□□□□ -0.23
BRWD1-IT1-201ENST00000435608 SSUH2Q9Y2M2 353 aa13.61□□□□□ -0.23
BRWD1-IT1-201ENST00000435608 CSRNP3Q8WYN3 585 aa13.54□□□□□ -0.24
BRWD1-IT1-201ENST00000435608 PRKAR2AP13861 404 aaKnown RBP13.51□□□□□ -0.25
BRWD1-IT1-201ENST00000435608 EHMT2Q96KQ7 1210 aa13.5□□□□□ -0.25
BRWD1-IT1-201ENST00000435608 EVX2Q03828 476 aa13.44□□□□□ -0.26
BRWD1-IT1-201ENST00000435608 PABPN1Q86U42 306 aaKnown RBP eCLIP13.44□□□□□ -0.26
BRWD1-IT1-201ENST00000435608 PRR29P0C7W0 189 aa13.36□□□□□ -0.27
BRWD1-IT1-201ENST00000435608 CHADLQ6NUI6 762 aa13.34□□□□□ -0.27
BRWD1-IT1-201ENST00000435608 C19orf67A6NJJ6 358 aa13.32□□□□□ -0.28
BRWD1-IT1-201ENST00000435608 GABBR2O75899 941 aa13.16□□□□□ -0.3
BRWD1-IT1-201ENST00000435608 FARP1Q9Y4F1 1045 aaPredicted RBP13.13□□□□□ -0.31
BRWD1-IT1-201ENST00000435608 CD44P16070 742 aaKnown RBP13.08□□□□□ -0.32
BRWD1-IT1-201ENST00000435608 STAG3Q9UJ98 1225 aa13.08□□□□□ -0.32
BRWD1-IT1-201ENST00000435608 SPDYE4A6NLX3 237 aa13.07□□□□□ -0.32
BRWD1-IT1-201ENST00000435608 CCDC180Q9P1Z9 1646 aa13.05□□□□□ -0.32
BRWD1-IT1-201ENST00000435608 CREBZFQ9NS37 354 aa12.97□□□□□ -0.33
BRWD1-IT1-201ENST00000435608 CLCN6P51797 869 aa12.94□□□□□ -0.34
BRWD1-IT1-201ENST00000435608 ZRANB1Q9UGI0 708 aa12.89□□□□□ -0.35
BRWD1-IT1-201ENST00000435608 LHX8Q68G74 356 aa12.88□□□□□ -0.35
BRWD1-IT1-201ENST00000435608 ZNF579Q8NAF0 562 aaKnown RBP12.86□□□□□ -0.35
BRWD1-IT1-201ENST00000435608 POTEIP0CG38 1075 aa12.85□□□□□ -0.35
BRWD1-IT1-201ENST00000435608 DCBLD2Q96PD2 775 aa12.81□□□□□ -0.36
BRWD1-IT1-201ENST00000435608 PAK3O75914 559 aaPredicted RBP12.79□□□□□ -0.36
BRWD1-IT1-201ENST00000435608 NPM1P06748 294 aaKnown RBP eCLIP12.78□□□□□ -0.36
BRWD1-IT1-201ENST00000435608 MNX1P50219 401 aaPredicted RBP12.73□□□□□ -0.37
BRWD1-IT1-201ENST00000435608 GALR2O43603 387 aaPredicted RBP12.7□□□□□ -0.38
BRWD1-IT1-201ENST00000435608 PROM2Q8N271 834 aa12.7□□□□□ -0.38
BRWD1-IT1-201ENST00000435608 PHF12Q96QT6 1004 aa12.68□□□□□ -0.38
BRWD1-IT1-201ENST00000435608 DCAF8L2P0C7V8 631 aa12.53□□□□□ -0.4
BRWD1-IT1-201ENST00000435608 TSPYL2Q9H2G4 693 aaPredicted RBP12.53□□□□□ -0.4
BRWD1-IT1-201ENST00000435608 PLEKHG5O94827 1062 aa12.52□□□□□ -0.41
BRWD1-IT1-201ENST00000435608 MS4A3Q96HJ5 214 aa12.51□□□□□ -0.41
BRWD1-IT1-201ENST00000435608 MIER1Q8N108 512 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms