Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KLHL1Q9NR64 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.67■□□□□ 0.58
KLHL1Q9NR64 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KLHL1Q9NR64 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KLHL1Q9NR64 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.67■□□□□ 0.58
KLHL1Q9NR64 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.67■□□□□ 0.58
KLHL1Q9NR64 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 KRT17P3-201ENST00000420566 1262 ntBASIC18.66■□□□□ 0.58
KLHL1Q9NR64 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.66■□□□□ 0.58
KLHL1Q9NR64 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 AL356652.1-201ENST00000615962 565 ntBASIC18.66■□□□□ 0.58
KLHL1Q9NR64 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
KLHL1Q9NR64 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
KLHL1Q9NR64 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
KLHL1Q9NR64 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.65■□□□□ 0.58
KLHL1Q9NR64 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL1Q9NR64 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL1Q9NR64 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL1Q9NR64 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL1Q9NR64 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL1Q9NR64 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL1Q9NR64 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL1Q9NR64 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL1Q9NR64 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL1Q9NR64 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL1Q9NR64 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.65■□□□□ 0.58
KLHL1Q9NR64 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL1Q9NR64 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL1Q9NR64 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
KLHL1Q9NR64 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL1Q9NR64 HCG11-201ENST00000411553 5696 ntBASIC18.65■□□□□ 0.58
KLHL1Q9NR64 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
KLHL1Q9NR64 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
KLHL1Q9NR64 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
KLHL1Q9NR64 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KLHL1Q9NR64 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KLHL1Q9NR64 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.64■□□□□ 0.57
KLHL1Q9NR64 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KLHL1Q9NR64 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KLHL1Q9NR64 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KLHL1Q9NR64 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KLHL1Q9NR64 AC073314.1-201ENST00000568729 2216 ntBASIC18.64■□□□□ 0.57
KLHL1Q9NR64 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KLHL1Q9NR64 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
KLHL1Q9NR64 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.64■□□□□ 0.57
KLHL1Q9NR64 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.64■□□□□ 0.57
KLHL1Q9NR64 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KLHL1Q9NR64 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.64■□□□□ 0.57
KLHL1Q9NR64 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
KLHL1Q9NR64 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
KLHL1Q9NR64 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
KLHL1Q9NR64 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KLHL1Q9NR64 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
KLHL1Q9NR64 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
KLHL1Q9NR64 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
KLHL1Q9NR64 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KLHL1Q9NR64 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KLHL1Q9NR64 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHL1Q9NR64 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
KLHL1Q9NR64 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
KLHL1Q9NR64 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHL1Q9NR64 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KLHL1Q9NR64 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHL1Q9NR64 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHL1Q9NR64 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.63■□□□□ 0.57
KLHL1Q9NR64 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
KLHL1Q9NR64 C1QBPP2-201ENST00000528754 825 ntBASIC18.63■□□□□ 0.57
KLHL1Q9NR64 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
KLHL1Q9NR64 FAM197Y4-202ENST00000622692 608 ntBASIC18.63■□□□□ 0.57
KLHL1Q9NR64 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.63■□□□□ 0.57
KLHL1Q9NR64 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
KLHL1Q9NR64 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
KLHL1Q9NR64 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.63■□□□□ 0.57
KLHL1Q9NR64 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.63■□□□□ 0.57
KLHL1Q9NR64 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHL1Q9NR64 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHL1Q9NR64 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
KLHL1Q9NR64 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHL1Q9NR64 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.63■□□□□ 0.57
KLHL1Q9NR64 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms