Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.97■□□□□ 0.79
VPS11Q9H270 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VPS11Q9H270 AL356652.1-201ENST00000615962 565 ntBASIC19.97■□□□□ 0.79
VPS11Q9H270 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.97■□□□□ 0.79
VPS11Q9H270 MYCNOS-205ENST00000641950 531 ntBASIC19.97■□□□□ 0.79
VPS11Q9H270 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS11Q9H270 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS11Q9H270 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS11Q9H270 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.97■□□□□ 0.79
VPS11Q9H270 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
VPS11Q9H270 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VPS11Q9H270 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.96■□□□□ 0.79
VPS11Q9H270 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.96■□□□□ 0.79
VPS11Q9H270 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS11Q9H270 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.96■□□□□ 0.79
VPS11Q9H270 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.96■□□□□ 0.79
VPS11Q9H270 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
VPS11Q9H270 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
VPS11Q9H270 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS11Q9H270 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS11Q9H270 PGM5P4-201ENST00000421970 445 ntBASIC19.96■□□□□ 0.79
VPS11Q9H270 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VPS11Q9H270 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.96■□□□□ 0.79
VPS11Q9H270 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.96■□□□□ 0.79
VPS11Q9H270 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.96■□□□□ 0.79
VPS11Q9H270 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VPS11Q9H270 AC138932.1-201ENST00000534164 6830 ntBASIC19.96■□□□□ 0.79
VPS11Q9H270 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS11Q9H270 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.96■□□□□ 0.79
VPS11Q9H270 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
VPS11Q9H270 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS11Q9H270 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.96■□□□□ 0.79
VPS11Q9H270 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS11Q9H270 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS11Q9H270 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS11Q9H270 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
VPS11Q9H270 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS11Q9H270 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS11Q9H270 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS11Q9H270 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS11Q9H270 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS11Q9H270 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS11Q9H270 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS11Q9H270 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.95■□□□□ 0.78
VPS11Q9H270 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS11Q9H270 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
VPS11Q9H270 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
VPS11Q9H270 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.95■□□□□ 0.78
VPS11Q9H270 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.95■□□□□ 0.78
VPS11Q9H270 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS11Q9H270 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.95■□□□□ 0.78
VPS11Q9H270 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS11Q9H270 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.95■□□□□ 0.78
VPS11Q9H270 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS11Q9H270 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS11Q9H270 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
VPS11Q9H270 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS11Q9H270 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS11Q9H270 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.95■□□□□ 0.78
VPS11Q9H270 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS11Q9H270 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS11Q9H270 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS11Q9H270 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.95■□□□□ 0.78
VPS11Q9H270 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS11Q9H270 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS11Q9H270 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS11Q9H270 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS11Q9H270 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS11Q9H270 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS11Q9H270 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.94■□□□□ 0.78
VPS11Q9H270 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS11Q9H270 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS11Q9H270 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
VPS11Q9H270 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VPS11Q9H270 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS11Q9H270 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS11Q9H270 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS11Q9H270 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.94■□□□□ 0.78
VPS11Q9H270 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
VPS11Q9H270 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS11Q9H270 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS11Q9H270 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS11Q9H270 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS11Q9H270 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS11Q9H270 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS11Q9H270 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS11Q9H270 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS11Q9H270 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS11Q9H270 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS11Q9H270 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
VPS11Q9H270 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.93■□□□□ 0.78
VPS11Q9H270 AC087633.2-202ENST00000565166 1439 ntBASIC19.93■□□□□ 0.78
VPS11Q9H270 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS11Q9H270 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VPS11Q9H270 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VPS11Q9H270 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.93■□□□□ 0.78
VPS11Q9H270 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS11Q9H270 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS11Q9H270 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS11Q9H270 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms