Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCM2Q9BSQ5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCM2Q9BSQ5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
CCM2Q9BSQ5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCM2Q9BSQ5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCM2Q9BSQ5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCM2Q9BSQ5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCM2Q9BSQ5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCM2Q9BSQ5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCM2Q9BSQ5 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.58■□□□□ 0.72
CCM2Q9BSQ5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.58■□□□□ 0.72
CCM2Q9BSQ5 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCM2Q9BSQ5 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CCM2Q9BSQ5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.58■□□□□ 0.72
CCM2Q9BSQ5 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.58■□□□□ 0.72
CCM2Q9BSQ5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.58■□□□□ 0.72
CCM2Q9BSQ5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCM2Q9BSQ5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.58■□□□□ 0.72
CCM2Q9BSQ5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCM2Q9BSQ5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCM2Q9BSQ5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CCM2Q9BSQ5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
CCM2Q9BSQ5 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCM2Q9BSQ5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CCM2Q9BSQ5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 RPS2P52-201ENST00000469610 820 ntBASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCM2Q9BSQ5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CCM2Q9BSQ5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.56■□□□□ 0.72
CCM2Q9BSQ5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCM2Q9BSQ5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.56■□□□□ 0.72
CCM2Q9BSQ5 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCM2Q9BSQ5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCM2Q9BSQ5 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCM2Q9BSQ5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.56■□□□□ 0.72
CCM2Q9BSQ5 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCM2Q9BSQ5 KRT17P3-201ENST00000420566 1262 ntBASIC19.56■□□□□ 0.72
CCM2Q9BSQ5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.56■□□□□ 0.72
CCM2Q9BSQ5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.56■□□□□ 0.72
CCM2Q9BSQ5 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.56■□□□□ 0.72
CCM2Q9BSQ5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCM2Q9BSQ5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCM2Q9BSQ5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCM2Q9BSQ5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCM2Q9BSQ5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCM2Q9BSQ5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 POM121L13P-201ENST00000422362 380 ntBASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2Q9BSQ5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CCM2Q9BSQ5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCM2Q9BSQ5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCM2Q9BSQ5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCM2Q9BSQ5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCM2Q9BSQ5 ABHD17AP1-201ENST00000358206 933 ntBASIC19.54■□□□□ 0.72
CCM2Q9BSQ5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.54■□□□□ 0.72
CCM2Q9BSQ5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCM2Q9BSQ5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.54■□□□□ 0.72
CCM2Q9BSQ5 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms