Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.84■□□□□ 0.61
BBS4Q96RK4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
BBS4Q96RK4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.84■□□□□ 0.61
BBS4Q96RK4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.84■□□□□ 0.61
BBS4Q96RK4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BBS4Q96RK4 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.84■□□□□ 0.61
BBS4Q96RK4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
BBS4Q96RK4 AL691432.2-201ENST00000607222 2038 ntBASIC18.84■□□□□ 0.61
BBS4Q96RK4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.84■□□□□ 0.61
BBS4Q96RK4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
BBS4Q96RK4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.84■□□□□ 0.61
BBS4Q96RK4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
BBS4Q96RK4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.83■□□□□ 0.61
BBS4Q96RK4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BBS4Q96RK4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
BBS4Q96RK4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
BBS4Q96RK4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BBS4Q96RK4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BBS4Q96RK4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BBS4Q96RK4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BBS4Q96RK4 SLC29A4P1-201ENST00000398760 971 ntBASIC18.83■□□□□ 0.6
BBS4Q96RK4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.83■□□□□ 0.6
BBS4Q96RK4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.83■□□□□ 0.6
BBS4Q96RK4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.83■□□□□ 0.6
BBS4Q96RK4 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.83■□□□□ 0.6
BBS4Q96RK4 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.83■□□□□ 0.6
BBS4Q96RK4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BBS4Q96RK4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
BBS4Q96RK4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BBS4Q96RK4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BBS4Q96RK4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.82■□□□□ 0.6
BBS4Q96RK4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BBS4Q96RK4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
BBS4Q96RK4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BBS4Q96RK4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BBS4Q96RK4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BBS4Q96RK4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.82■□□□□ 0.6
BBS4Q96RK4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BBS4Q96RK4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
BBS4Q96RK4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
BBS4Q96RK4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.82■□□□□ 0.6
BBS4Q96RK4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
BBS4Q96RK4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.82■□□□□ 0.6
BBS4Q96RK4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BBS4Q96RK4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
BBS4Q96RK4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.82■□□□□ 0.6
BBS4Q96RK4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BBS4Q96RK4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BBS4Q96RK4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BBS4Q96RK4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BBS4Q96RK4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BBS4Q96RK4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.82■□□□□ 0.6
BBS4Q96RK4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BBS4Q96RK4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BBS4Q96RK4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BBS4Q96RK4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BBS4Q96RK4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BBS4Q96RK4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BBS4Q96RK4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BBS4Q96RK4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BBS4Q96RK4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
BBS4Q96RK4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
BBS4Q96RK4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BBS4Q96RK4 GPX1P1-201ENST00000388829 606 ntBASIC18.81■□□□□ 0.6
BBS4Q96RK4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BBS4Q96RK4 MIPEPP3-201ENST00000412105 444 ntBASIC18.81■□□□□ 0.6
BBS4Q96RK4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.81■□□□□ 0.6
BBS4Q96RK4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BBS4Q96RK4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
BBS4Q96RK4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BBS4Q96RK4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.81■□□□□ 0.6
BBS4Q96RK4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BBS4Q96RK4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BBS4Q96RK4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.81■□□□□ 0.6
BBS4Q96RK4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.81■□□□□ 0.6
BBS4Q96RK4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BBS4Q96RK4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
BBS4Q96RK4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BBS4Q96RK4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
BBS4Q96RK4 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.8■□□□□ 0.6
BBS4Q96RK4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BBS4Q96RK4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
BBS4Q96RK4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
BBS4Q96RK4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BBS4Q96RK4 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.8■□□□□ 0.6
BBS4Q96RK4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
BBS4Q96RK4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.8■□□□□ 0.6
BBS4Q96RK4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BBS4Q96RK4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BBS4Q96RK4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.8■□□□□ 0.6
BBS4Q96RK4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.8■□□□□ 0.6
BBS4Q96RK4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
BBS4Q96RK4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.8■□□□□ 0.6
BBS4Q96RK4 AC023632.3-201ENST00000521633 145 ntBASIC18.8■□□□□ 0.6
BBS4Q96RK4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BBS4Q96RK4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BBS4Q96RK4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
BBS4Q96RK4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BBS4Q96RK4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BBS4Q96RK4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms