Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15□□□□□ -0.01
AP1S3Q96PC3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP1S3Q96PC3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15□□□□□ -0.01
AP1S3Q96PC3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S3Q96PC3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S3Q96PC3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP1S3Q96PC3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 AFG3L1P-217ENST00000557444 2447 ntBASIC14.99□□□□□ -0.01
AP1S3Q96PC3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP1S3Q96PC3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 SMG8-203ENST00000578922 2178 ntBASIC14.98□□□□□ -0.01
AP1S3Q96PC3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.98□□□□□ -0.01
AP1S3Q96PC3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 AC126755.1-201ENST00000525846 6405 ntBASIC14.97□□□□□ -0.01
AP1S3Q96PC3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms