Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20■□□□□ 0.79
HMGB4Q8WW32 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20■□□□□ 0.79
HMGB4Q8WW32 KRT18P35-201ENST00000510488 1269 ntBASIC20■□□□□ 0.79
HMGB4Q8WW32 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20■□□□□ 0.79
HMGB4Q8WW32 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20■□□□□ 0.79
HMGB4Q8WW32 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20■□□□□ 0.79
HMGB4Q8WW32 AC092865.7-201ENST00000641832 219 ntBASIC20■□□□□ 0.79
HMGB4Q8WW32 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20■□□□□ 0.79
HMGB4Q8WW32 H19-201ENST00000411754 1788 ntTSL 5 BASIC20■□□□□ 0.79
HMGB4Q8WW32 KRT8P17-201ENST00000453110 1448 ntBASIC20■□□□□ 0.79
HMGB4Q8WW32 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 PLK5-205ENST00000642079 1969 ntBASIC19.99■□□□□ 0.79
HMGB4Q8WW32 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 ARMC10P1-201ENST00000313754 855 ntBASIC19.99■□□□□ 0.79
HMGB4Q8WW32 AC005521.1-201ENST00000393351 872 ntBASIC19.99■□□□□ 0.79
HMGB4Q8WW32 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 NAPSB-206ENST00000562112 1266 ntBASIC19.99■□□□□ 0.79
HMGB4Q8WW32 AL049597.2-201ENST00000565575 961 ntBASIC19.99■□□□□ 0.79
HMGB4Q8WW32 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
HMGB4Q8WW32 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HMGB4Q8WW32 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGB4Q8WW32 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGB4Q8WW32 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGB4Q8WW32 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGB4Q8WW32 FEM1AP4-201ENST00000443167 1987 ntBASIC19.98■□□□□ 0.79
HMGB4Q8WW32 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGB4Q8WW32 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGB4Q8WW32 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGB4Q8WW32 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGB4Q8WW32 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.98■□□□□ 0.79
HMGB4Q8WW32 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.98■□□□□ 0.79
HMGB4Q8WW32 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGB4Q8WW32 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.98■□□□□ 0.79
HMGB4Q8WW32 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGB4Q8WW32 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGB4Q8WW32 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGB4Q8WW32 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGB4Q8WW32 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGB4Q8WW32 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGB4Q8WW32 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
HMGB4Q8WW32 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGB4Q8WW32 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGB4Q8WW32 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HMGB4Q8WW32 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGB4Q8WW32 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGB4Q8WW32 KRT18P57-201ENST00000443599 1254 ntBASIC19.97■□□□□ 0.79
HMGB4Q8WW32 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGB4Q8WW32 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.97■□□□□ 0.79
HMGB4Q8WW32 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.97■□□□□ 0.79
HMGB4Q8WW32 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGB4Q8WW32 CYP2D8P-201ENST00000433633 1490 ntBASIC19.97■□□□□ 0.79
HMGB4Q8WW32 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.97■□□□□ 0.79
HMGB4Q8WW32 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGB4Q8WW32 FP700111.2-201ENST00000619190 1892 ntBASIC19.96■□□□□ 0.79
HMGB4Q8WW32 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HMGB4Q8WW32 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGB4Q8WW32 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGB4Q8WW32 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGB4Q8WW32 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGB4Q8WW32 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGB4Q8WW32 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
HMGB4Q8WW32 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGB4Q8WW32 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.96■□□□□ 0.79
HMGB4Q8WW32 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
HMGB4Q8WW32 AC116562.2-201ENST00000507042 360 ntBASIC19.96■□□□□ 0.79
HMGB4Q8WW32 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGB4Q8WW32 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.96■□□□□ 0.79
HMGB4Q8WW32 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGB4Q8WW32 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.96■□□□□ 0.79
HMGB4Q8WW32 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
HMGB4Q8WW32 AP006587.1-201ENST00000534129 1502 ntBASIC19.96■□□□□ 0.79
HMGB4Q8WW32 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HMGB4Q8WW32 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGB4Q8WW32 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGB4Q8WW32 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.95■□□□□ 0.78
HMGB4Q8WW32 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HMGB4Q8WW32 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
HMGB4Q8WW32 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGB4Q8WW32 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
HMGB4Q8WW32 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms