Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LMO3Q8TAP4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.37■■□□□ 1.01
LMO3Q8TAP4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.37■■□□□ 1.01
LMO3Q8TAP4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.37■■□□□ 1.01
LMO3Q8TAP4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
LMO3Q8TAP4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LMO3Q8TAP4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.36■■□□□ 1.01
LMO3Q8TAP4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LMO3Q8TAP4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
LMO3Q8TAP4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LMO3Q8TAP4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LMO3Q8TAP4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LMO3Q8TAP4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.36■■□□□ 1.01
LMO3Q8TAP4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
LMO3Q8TAP4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
LMO3Q8TAP4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LMO3Q8TAP4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LMO3Q8TAP4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.36■■□□□ 1.01
LMO3Q8TAP4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LMO3Q8TAP4 AC006557.6-201ENST00000623071 864 ntBASIC21.36■■□□□ 1.01
LMO3Q8TAP4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LMO3Q8TAP4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.36■■□□□ 1.01
LMO3Q8TAP4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LMO3Q8TAP4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LMO3Q8TAP4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
LMO3Q8TAP4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LMO3Q8TAP4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
LMO3Q8TAP4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
LMO3Q8TAP4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LMO3Q8TAP4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LMO3Q8TAP4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.35■■□□□ 1.01
LMO3Q8TAP4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
LMO3Q8TAP4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.35■■□□□ 1.01
LMO3Q8TAP4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.35■■□□□ 1.01
LMO3Q8TAP4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LMO3Q8TAP4 AC116351.2-201ENST00000606540 1585 ntBASIC21.35■■□□□ 1.01
LMO3Q8TAP4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LMO3Q8TAP4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LMO3Q8TAP4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 AC060766.5-201ENST00000590539 871 ntBASIC21.34■■□□□ 1.01
LMO3Q8TAP4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LMO3Q8TAP4 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.34■■□□□ 1.01
LMO3Q8TAP4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 AC018553.1-201ENST00000616682 1458 ntBASIC21.33■■□□□ 1.01
LMO3Q8TAP4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 AC092368.3-202ENST00000574180 1591 ntBASIC21.33■■□□□ 1.01
LMO3Q8TAP4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 ID1-201ENST00000376105 1233 ntBASIC21.33■■□□□ 1.01
LMO3Q8TAP4 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 PNMA6B-201ENST00000538162 1200 ntBASIC21.33■■□□□ 1.01
LMO3Q8TAP4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
LMO3Q8TAP4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.33■■□□□ 1
LMO3Q8TAP4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.33■■□□□ 1
LMO3Q8TAP4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.32■■□□□ 1
LMO3Q8TAP4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
LMO3Q8TAP4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.32■■□□□ 1
LMO3Q8TAP4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LMO3Q8TAP4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
LMO3Q8TAP4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.32■■□□□ 1
LMO3Q8TAP4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms