Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 AC120498.10-201ENST00000621827 505 ntBASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 BX119927.1-201ENST00000636596 1552 ntBASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CRLF3Q8IUI8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 AC080038.1-201ENST00000611274 1154 ntBASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 TREX1-205ENST00000625293 1783 ntBASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CRLF3Q8IUI8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CRLF3Q8IUI8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
CRLF3Q8IUI8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CRLF3Q8IUI8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.79■□□□□ 0.76
CRLF3Q8IUI8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.79■□□□□ 0.76
CRLF3Q8IUI8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CRLF3Q8IUI8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CRLF3Q8IUI8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CRLF3Q8IUI8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CRLF3Q8IUI8 KRT8P36-201ENST00000489121 1440 ntBASIC19.79■□□□□ 0.76
CRLF3Q8IUI8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CRLF3Q8IUI8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CRLF3Q8IUI8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.79■□□□□ 0.76
CRLF3Q8IUI8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CRLF3Q8IUI8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.79■□□□□ 0.76
CRLF3Q8IUI8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CRLF3Q8IUI8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.79■□□□□ 0.76
CRLF3Q8IUI8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.79■□□□□ 0.76
CRLF3Q8IUI8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CRLF3Q8IUI8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CRLF3Q8IUI8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CRLF3Q8IUI8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.78■□□□□ 0.76
CRLF3Q8IUI8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.78■□□□□ 0.76
CRLF3Q8IUI8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CRLF3Q8IUI8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CRLF3Q8IUI8 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.78■□□□□ 0.76
CRLF3Q8IUI8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.78■□□□□ 0.76
CRLF3Q8IUI8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CRLF3Q8IUI8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.78■□□□□ 0.76
CRLF3Q8IUI8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CRLF3Q8IUI8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CRLF3Q8IUI8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.78■□□□□ 0.76
CRLF3Q8IUI8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CRLF3Q8IUI8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CRLF3Q8IUI8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
CRLF3Q8IUI8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CRLF3Q8IUI8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CRLF3Q8IUI8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.77■□□□□ 0.76
CRLF3Q8IUI8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CRLF3Q8IUI8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CRLF3Q8IUI8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CRLF3Q8IUI8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.77■□□□□ 0.76
CRLF3Q8IUI8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CRLF3Q8IUI8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CRLF3Q8IUI8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CRLF3Q8IUI8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms