Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF43Q68DV7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF43Q68DV7 AL359736.2-201ENST00000621992 437 ntBASIC20.84■□□□□ 0.93
RNF43Q68DV7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RNF43Q68DV7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF43Q68DV7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF43Q68DV7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF43Q68DV7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF43Q68DV7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF43Q68DV7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF43Q68DV7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF43Q68DV7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF43Q68DV7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF43Q68DV7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF43Q68DV7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
RNF43Q68DV7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.83■□□□□ 0.93
RNF43Q68DV7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RNF43Q68DV7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF43Q68DV7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.83■□□□□ 0.93
RNF43Q68DV7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF43Q68DV7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF43Q68DV7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF43Q68DV7 FAM210CP-201ENST00000445714 574 ntBASIC20.83■□□□□ 0.93
RNF43Q68DV7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
RNF43Q68DV7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.83■□□□□ 0.93
RNF43Q68DV7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.83■□□□□ 0.93
RNF43Q68DV7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.83■□□□□ 0.93
RNF43Q68DV7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.83■□□□□ 0.93
RNF43Q68DV7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.83■□□□□ 0.93
RNF43Q68DV7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.83■□□□□ 0.93
RNF43Q68DV7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF43Q68DV7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF43Q68DV7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF43Q68DV7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.83■□□□□ 0.92
RNF43Q68DV7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.83■□□□□ 0.92
RNF43Q68DV7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.83■□□□□ 0.92
RNF43Q68DV7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF43Q68DV7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF43Q68DV7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF43Q68DV7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF43Q68DV7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF43Q68DV7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF43Q68DV7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF43Q68DV7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RNF43Q68DV7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RNF43Q68DV7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
RNF43Q68DV7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF43Q68DV7 FAM197Y4-202ENST00000622692 608 ntBASIC20.82■□□□□ 0.92
RNF43Q68DV7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF43Q68DV7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF43Q68DV7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF43Q68DV7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF43Q68DV7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF43Q68DV7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF43Q68DV7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF43Q68DV7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF43Q68DV7 PLK5-205ENST00000642079 1969 ntBASIC20.81■□□□□ 0.92
RNF43Q68DV7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF43Q68DV7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
RNF43Q68DV7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF43Q68DV7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF43Q68DV7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF43Q68DV7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RNF43Q68DV7 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.81■□□□□ 0.92
RNF43Q68DV7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
RNF43Q68DV7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF43Q68DV7 MIR4497-201ENST00000583208 89 ntBASIC20.81■□□□□ 0.92
RNF43Q68DV7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF43Q68DV7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.81■□□□□ 0.92
RNF43Q68DV7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF43Q68DV7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF43Q68DV7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF43Q68DV7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF43Q68DV7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF43Q68DV7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF43Q68DV7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.8■□□□□ 0.92
RNF43Q68DV7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RNF43Q68DV7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF43Q68DV7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF43Q68DV7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF43Q68DV7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF43Q68DV7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF43Q68DV7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RNF43Q68DV7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF43Q68DV7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RNF43Q68DV7 PCDHAC2-203ENST00000615316 3011 ntBASIC20.8■□□□□ 0.92
RNF43Q68DV7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
RNF43Q68DV7 AL020996.1-203ENST00000536896 2307 ntBASIC20.8■□□□□ 0.92
RNF43Q68DV7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF43Q68DV7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF43Q68DV7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF43Q68DV7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.8■□□□□ 0.92
RNF43Q68DV7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.8■□□□□ 0.92
RNF43Q68DV7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF43Q68DV7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.8■□□□□ 0.92
RNF43Q68DV7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF43Q68DV7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF43Q68DV7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF43Q68DV7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF43Q68DV7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms