Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC3O95833 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CLIC3O95833 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CLIC3O95833 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC3O95833 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC3O95833 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC3O95833 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.34■□□□□ 0.53
CLIC3O95833 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CLIC3O95833 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC3O95833 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC3O95833 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC3O95833 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC3O95833 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.34■□□□□ 0.53
CLIC3O95833 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CLIC3O95833 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CLIC3O95833 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CLIC3O95833 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.34■□□□□ 0.53
CLIC3O95833 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CLIC3O95833 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CLIC3O95833 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC3O95833 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC3O95833 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.34■□□□□ 0.53
CLIC3O95833 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.33■□□□□ 0.53
CLIC3O95833 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.33■□□□□ 0.53
CLIC3O95833 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.33■□□□□ 0.53
CLIC3O95833 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLIC3O95833 KRT8P36-201ENST00000489121 1440 ntBASIC18.33■□□□□ 0.53
CLIC3O95833 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLIC3O95833 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLIC3O95833 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLIC3O95833 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLIC3O95833 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC3O95833 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
CLIC3O95833 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.33■□□□□ 0.52
CLIC3O95833 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.33■□□□□ 0.52
CLIC3O95833 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC3O95833 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC3O95833 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CLIC3O95833 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC3O95833 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC3O95833 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.33■□□□□ 0.52
CLIC3O95833 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
CLIC3O95833 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC3O95833 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC3O95833 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC3O95833 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC3O95833 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC3O95833 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC3O95833 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC3O95833 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC3O95833 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.32■□□□□ 0.52
CLIC3O95833 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CLIC3O95833 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLIC3O95833 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC3O95833 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC3O95833 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CLIC3O95833 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC3O95833 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC3O95833 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC3O95833 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC3O95833 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC3O95833 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC3O95833 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC3O95833 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC3O95833 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.32■□□□□ 0.52
CLIC3O95833 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC3O95833 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.31■□□□□ 0.52
CLIC3O95833 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.31■□□□□ 0.52
CLIC3O95833 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC3O95833 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC3O95833 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.31■□□□□ 0.52
CLIC3O95833 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC3O95833 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC3O95833 PCDHB18P-201ENST00000524813 2368 ntBASIC18.31■□□□□ 0.52
CLIC3O95833 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC3O95833 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.31■□□□□ 0.52
CLIC3O95833 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.31■□□□□ 0.52
CLIC3O95833 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC3O95833 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC3O95833 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CLIC3O95833 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.31■□□□□ 0.52
CLIC3O95833 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC3O95833 BX842568.3-201ENST00000418104 571 ntBASIC18.31■□□□□ 0.52
CLIC3O95833 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.31■□□□□ 0.52
CLIC3O95833 AC105233.4-201ENST00000642045 216 ntBASIC18.31■□□□□ 0.52
CLIC3O95833 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC3O95833 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC3O95833 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC3O95833 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.31■□□□□ 0.52
CLIC3O95833 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CLIC3O95833 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.3■□□□□ 0.52
CLIC3O95833 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.3■□□□□ 0.52
CLIC3O95833 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CLIC3O95833 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC3O95833 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC3O95833 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.3■□□□□ 0.52
CLIC3O95833 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC3O95833 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLIC3O95833 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CLIC3O95833 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms