Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
XRCC2O43543 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
XRCC2O43543 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
XRCC2O43543 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
XRCC2O43543 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.27■□□□□ 0.36
XRCC2O43543 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.27■□□□□ 0.36
XRCC2O43543 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
XRCC2O43543 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
XRCC2O43543 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
XRCC2O43543 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.27■□□□□ 0.36
XRCC2O43543 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
XRCC2O43543 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
XRCC2O43543 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
XRCC2O43543 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.27■□□□□ 0.36
XRCC2O43543 AL691432.2-201ENST00000607222 2038 ntBASIC17.27■□□□□ 0.36
XRCC2O43543 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.27■□□□□ 0.36
XRCC2O43543 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.27■□□□□ 0.36
XRCC2O43543 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.27■□□□□ 0.36
XRCC2O43543 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.27■□□□□ 0.36
XRCC2O43543 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
XRCC2O43543 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.27■□□□□ 0.36
XRCC2O43543 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
XRCC2O43543 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
XRCC2O43543 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
XRCC2O43543 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
XRCC2O43543 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
XRCC2O43543 AFG3L1P-217ENST00000557444 2447 ntBASIC17.27■□□□□ 0.35
XRCC2O43543 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.27■□□□□ 0.35
XRCC2O43543 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
XRCC2O43543 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
XRCC2O43543 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.27■□□□□ 0.35
XRCC2O43543 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
XRCC2O43543 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC2O43543 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
XRCC2O43543 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC2O43543 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC2O43543 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC2O43543 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
XRCC2O43543 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC2O43543 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC2O43543 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.26■□□□□ 0.35
XRCC2O43543 BX276092.2-201ENST00000417668 665 ntBASIC17.26■□□□□ 0.35
XRCC2O43543 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.26■□□□□ 0.35
XRCC2O43543 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.26■□□□□ 0.35
XRCC2O43543 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.26■□□□□ 0.35
XRCC2O43543 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.26■□□□□ 0.35
XRCC2O43543 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.26■□□□□ 0.35
XRCC2O43543 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.26■□□□□ 0.35
XRCC2O43543 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC2O43543 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
XRCC2O43543 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC2O43543 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC2O43543 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC2O43543 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC2O43543 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC2O43543 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
XRCC2O43543 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC2O43543 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
XRCC2O43543 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.26■□□□□ 0.35
XRCC2O43543 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
XRCC2O43543 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XRCC2O43543 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC2O43543 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC2O43543 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC2O43543 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.25■□□□□ 0.35
XRCC2O43543 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.25■□□□□ 0.35
XRCC2O43543 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC2O43543 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.25■□□□□ 0.35
XRCC2O43543 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
XRCC2O43543 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC2O43543 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.25■□□□□ 0.35
XRCC2O43543 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.25■□□□□ 0.35
XRCC2O43543 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC2O43543 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC2O43543 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC2O43543 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC2O43543 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.25■□□□□ 0.35
XRCC2O43543 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.25■□□□□ 0.35
XRCC2O43543 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
XRCC2O43543 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.25■□□□□ 0.35
XRCC2O43543 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
XRCC2O43543 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.25■□□□□ 0.35
XRCC2O43543 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.25■□□□□ 0.35
XRCC2O43543 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.25■□□□□ 0.35
XRCC2O43543 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC2O43543 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
XRCC2O43543 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.25■□□□□ 0.35
XRCC2O43543 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC2O43543 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC2O43543 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC2O43543 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XRCC2O43543 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC2O43543 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
XRCC2O43543 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC2O43543 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC2O43543 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
XRCC2O43543 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC2O43543 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
XRCC2O43543 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
XRCC2O43543 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms