Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPTBN2O15020 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPTBN2O15020 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
SPTBN2O15020 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.04■□□□□ 0.64
SPTBN2O15020 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SPTBN2O15020 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.04■□□□□ 0.64
SPTBN2O15020 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.04■□□□□ 0.64
SPTBN2O15020 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
SPTBN2O15020 PRSS44-201ENST00000515154 1146 ntBASIC19.04■□□□□ 0.64
SPTBN2O15020 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.04■□□□□ 0.64
SPTBN2O15020 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.04■□□□□ 0.64
SPTBN2O15020 AL732292.2-201ENST00000609649 430 ntBASIC19.04■□□□□ 0.64
SPTBN2O15020 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
SPTBN2O15020 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.03■□□□□ 0.64
SPTBN2O15020 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPTBN2O15020 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPTBN2O15020 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPTBN2O15020 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.03■□□□□ 0.64
SPTBN2O15020 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.03■□□□□ 0.64
SPTBN2O15020 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.03■□□□□ 0.64
SPTBN2O15020 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
SPTBN2O15020 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPTBN2O15020 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPTBN2O15020 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPTBN2O15020 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.03■□□□□ 0.64
SPTBN2O15020 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPTBN2O15020 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPTBN2O15020 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPTBN2O15020 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
SPTBN2O15020 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPTBN2O15020 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPTBN2O15020 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPTBN2O15020 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPTBN2O15020 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.02■□□□□ 0.64
SPTBN2O15020 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPTBN2O15020 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPTBN2O15020 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.02■□□□□ 0.64
SPTBN2O15020 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPTBN2O15020 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.02■□□□□ 0.64
SPTBN2O15020 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.02■□□□□ 0.64
SPTBN2O15020 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SPTBN2O15020 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPTBN2O15020 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.02■□□□□ 0.63
SPTBN2O15020 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.02■□□□□ 0.63
SPTBN2O15020 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.02■□□□□ 0.63
SPTBN2O15020 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SPTBN2O15020 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SPTBN2O15020 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SPTBN2O15020 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN2O15020 AC092183.1-201ENST00000469884 875 ntBASIC19.01■□□□□ 0.63
SPTBN2O15020 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN2O15020 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN2O15020 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN2O15020 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN2O15020 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN2O15020 AC096733.2-201ENST00000609937 1394 ntBASIC19.01■□□□□ 0.63
SPTBN2O15020 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.01■□□□□ 0.63
SPTBN2O15020 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN2O15020 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN2O15020 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.01■□□□□ 0.63
SPTBN2O15020 AC117500.6-201ENST00000624871 588 ntBASIC19.01■□□□□ 0.63
SPTBN2O15020 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.01■□□□□ 0.63
SPTBN2O15020 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN2O15020 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN2O15020 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.01■□□□□ 0.63
SPTBN2O15020 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN2O15020 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
SPTBN2O15020 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SPTBN2O15020 KRT18P13-201ENST00000400056 1290 ntBASIC19■□□□□ 0.63
SPTBN2O15020 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SPTBN2O15020 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19■□□□□ 0.63
SPTBN2O15020 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19■□□□□ 0.63
SPTBN2O15020 AC023632.3-201ENST00000521633 145 ntBASIC19■□□□□ 0.63
SPTBN2O15020 SLC25A6P4-201ENST00000586535 553 ntBASIC19■□□□□ 0.63
SPTBN2O15020 AP000692.2-201ENST00000608391 879 ntBASIC19■□□□□ 0.63
SPTBN2O15020 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPTBN2O15020 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SPTBN2O15020 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPTBN2O15020 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPTBN2O15020 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPTBN2O15020 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SPTBN2O15020 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
SPTBN2O15020 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19■□□□□ 0.63
SPTBN2O15020 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPTBN2O15020 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19■□□□□ 0.63
SPTBN2O15020 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPTBN2O15020 CCR12P-201ENST00000446203 998 ntBASIC19■□□□□ 0.63
SPTBN2O15020 KRT18P38-201ENST00000449496 1282 ntBASIC19■□□□□ 0.63
SPTBN2O15020 AP002469.2-201ENST00000531724 424 ntBASIC19■□□□□ 0.63
SPTBN2O15020 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19■□□□□ 0.63
SPTBN2O15020 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
SPTBN2O15020 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19■□□□□ 0.63
SPTBN2O15020 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPTBN2O15020 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPTBN2O15020 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPTBN2O15020 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SPTBN2O15020 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SPTBN2O15020 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
SPTBN2O15020 AL160237.2-201ENST00000556165 472 ntBASIC18.99■□□□□ 0.63
SPTBN2O15020 C1QL1P1-201ENST00000568105 661 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms