Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBFD1O14562 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBFD1O14562 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
UBFD1O14562 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBFD1O14562 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBFD1O14562 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBFD1O14562 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBFD1O14562 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBFD1O14562 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBFD1O14562 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.3■□□□□ 0.68
UBFD1O14562 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.3■□□□□ 0.68
UBFD1O14562 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBFD1O14562 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBFD1O14562 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBFD1O14562 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBFD1O14562 AC016769.1-201ENST00000409132 1010 ntBASIC19.3■□□□□ 0.68
UBFD1O14562 CYP2T1P-201ENST00000432607 1285 ntBASIC19.3■□□□□ 0.68
UBFD1O14562 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.3■□□□□ 0.68
UBFD1O14562 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.3■□□□□ 0.68
UBFD1O14562 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.3■□□□□ 0.68
UBFD1O14562 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
UBFD1O14562 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
UBFD1O14562 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBFD1O14562 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBFD1O14562 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBFD1O14562 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
UBFD1O14562 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.3■□□□□ 0.68
UBFD1O14562 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBFD1O14562 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.3■□□□□ 0.68
UBFD1O14562 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBFD1O14562 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBFD1O14562 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBFD1O14562 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.29■□□□□ 0.68
UBFD1O14562 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBFD1O14562 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBFD1O14562 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.29■□□□□ 0.68
UBFD1O14562 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.29■□□□□ 0.68
UBFD1O14562 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBFD1O14562 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBFD1O14562 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.29■□□□□ 0.68
UBFD1O14562 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
UBFD1O14562 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.29■□□□□ 0.68
UBFD1O14562 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.29■□□□□ 0.68
UBFD1O14562 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.29■□□□□ 0.68
UBFD1O14562 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.29■□□□□ 0.68
UBFD1O14562 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBFD1O14562 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.29■□□□□ 0.68
UBFD1O14562 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBFD1O14562 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBFD1O14562 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBFD1O14562 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
UBFD1O14562 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBFD1O14562 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBFD1O14562 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBFD1O14562 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
UBFD1O14562 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBFD1O14562 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.28■□□□□ 0.68
UBFD1O14562 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBFD1O14562 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBFD1O14562 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBFD1O14562 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBFD1O14562 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBFD1O14562 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBFD1O14562 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
UBFD1O14562 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.28■□□□□ 0.68
UBFD1O14562 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBFD1O14562 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.28■□□□□ 0.68
UBFD1O14562 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBFD1O14562 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.28■□□□□ 0.68
UBFD1O14562 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBFD1O14562 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.28■□□□□ 0.68
UBFD1O14562 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBFD1O14562 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBFD1O14562 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.28■□□□□ 0.68
UBFD1O14562 Z82202.1-201ENST00000623446 1880 ntBASIC19.28■□□□□ 0.68
UBFD1O14562 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBFD1O14562 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBFD1O14562 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
UBFD1O14562 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.27■□□□□ 0.68
UBFD1O14562 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBFD1O14562 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.27■□□□□ 0.68
UBFD1O14562 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBFD1O14562 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBFD1O14562 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.27■□□□□ 0.68
UBFD1O14562 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBFD1O14562 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
UBFD1O14562 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBFD1O14562 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
UBFD1O14562 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBFD1O14562 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBFD1O14562 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBFD1O14562 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
UBFD1O14562 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.27■□□□□ 0.68
UBFD1O14562 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.27■□□□□ 0.68
UBFD1O14562 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBFD1O14562 RARRES2P6-201ENST00000567333 442 ntBASIC19.27■□□□□ 0.68
UBFD1O14562 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.27■□□□□ 0.68
UBFD1O14562 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.27■□□□□ 0.68
UBFD1O14562 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBFD1O14562 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms