Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ME2-210ENST00000639255 2262 ntTSL 5 BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 STK32C-205ENST00000456004 607 ntTSL 2 BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
CHKB-CPT1BH3BT56 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.63
CHKB-CPT1BH3BT56 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 MIR3960-201ENST00000583311 91 ntBASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 AC139713.2-201ENST00000641328 2723 ntBASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 PRORSD1P-202ENST00000563365 2154 ntBASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 AC097376.2-205ENST00000610159 5334 ntBASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CHKB-CPT1BH3BT56 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 AL513477.1-201ENST00000602865 2407 ntBASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 CHST11-203ENST00000547956 936 ntTSL 2 BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 AL391005.1-201ENST00000623953 2435 ntBASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 EML3-216ENST00000529309 2909 ntTSL 2 BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms